RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C RQC2Q12532 1038 aaKnown RBP9.54□□□□□ -0.88
PAT1YCR077C SGS1P35187 1447 aa9.5□□□□□ -0.89
PAT1YCR077C SPA2P23201 1466 aaKnown RBP9.48□□□□□ -0.89
PAT1YCR077C BFR2Q06631 534 aaKnown RBP9.42□□□□□ -0.9
PAT1YCR077C SSN2P38931 1420 aa9.33□□□□□ -0.92
PAT1YCR077C DRS1P32892 752 aaKnown RBP9.31□□□□□ -0.92
PAT1YCR077C INO80P53115 1489 aa9.29□□□□□ -0.92
PAT1YCR077C MON2P48563 1636 aaPredicted RBP9.25□□□□□ -0.93
PAT1YCR077C TCB3Q03640 1545 aaKnown RBP9.1□□□□□ -0.95
PAT1YCR077C TY1B-DR4Q07793 1604 aa9.05□□□□□ -0.96
PAT1YCR077C SWR1Q05471 1514 aa8.99□□□□□ -0.97
PAT1YCR077C SKI3P17883 1432 aaKnown RBP8.91□□□□□ -0.98
PAT1YCR077C DNA2P38859 1522 aa8.87□□□□□ -0.99
PAT1YCR077C HSL1P34244 1518 aa8.86□□□□□ -0.99
PAT1YCR077C SPT6P23615 1451 aaKnown RBP8.84□□□□□ -0.99
PAT1YCR077C TFA1P36100 482 aa8.76□□□□□ -1.01
PAT1YCR077C KOG1P38873 1557 aa8.72□□□□□ -1.01
PAT1YCR077C HIR3P47171 1648 aa8.71□□□□□ -1.02
PAT1YCR077C XRN1P22147 1528 aaKnown RBP8.69□□□□□ -1.02
PAT1YCR077C CHD1P32657 1468 aa8.66□□□□□ -1.02
PAT1YCR077C MMS22Q06164 1454 aa8.59□□□□□ -1.03
PAT1YCR077C REV3P14284 1504 aa8.55□□□□□ -1.04
PAT1YCR077C TAF2P23255 1407 aa8.55□□□□□ -1.04
PAT1YCR077C URN1Q06525 465 aaKnown RBP8.55□□□□□ -1.04
PAT1YCR077C NOP2P40991 618 aaKnown RBP8.54□□□□□ -1.04
PAT1YCR077C ECM5Q03214 1411 aa8.53□□□□□ -1.04
PAT1YCR077C THO2P53552 1597 aaKnown RBP8.47□□□□□ -1.05
PAT1YCR077C SIN3P22579 1536 aa8.47□□□□□ -1.05
PAT1YCR077C BUD4P47136 1447 aa8.46□□□□□ -1.06
PAT1YCR077C EBP2P36049 427 aaKnown RBP8.45□□□□□ -1.06
PAT1YCR077C SSK2P53599 1579 aa8.44□□□□□ -1.06
PAT1YCR077C NSR1P27476 414 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
PAT1YCR077C CAB3P36076 571 aa8.42□□□□□ -1.06
PAT1YCR077C UFD4P33202 1483 aa8.42□□□□□ -1.06
PAT1YCR077C ESP1Q03018 1630 aa8.38□□□□□ -1.07
PAT1YCR077C TAF7Q05021 590 aa8.36□□□□□ -1.07
PAT1YCR077C STU1P38198 1513 aa8.35□□□□□ -1.07
PAT1YCR077C MDS3P53094 1487 aa8.35□□□□□ -1.07
PAT1YCR077C SIS2P36024 562 aa8.35□□□□□ -1.07
PAT1YCR077C RSE1Q04693 1361 aaKnown RBP8.34□□□□□ -1.07
PAT1YCR077C ATG2P53855 1592 aa8.33□□□□□ -1.08
PAT1YCR077C MYO2P19524 1574 aaKnown RBP8.32□□□□□ -1.08
PAT1YCR077C TRM732Q03496 1420 aa8.31□□□□□ -1.08
PAT1YCR077C POL1P13382 1468 aa8.31□□□□□ -1.08
PAT1YCR077C MTC1P47018 478 aaKnown RBP8.31□□□□□ -1.08
PAT1YCR077C PEP1P32319 1579 aa8.3□□□□□ -1.08
PAT1YCR077C YTA7P40340 1379 aa8.28□□□□□ -1.08
PAT1YCR077C IKI3Q06706 1349 aaKnown RBP8.26□□□□□ -1.09
PAT1YCR077C BPT1P14772 1559 aa8.24□□□□□ -1.09
PAT1YCR077C SPP41P38904 1435 aa8.24□□□□□ -1.09
PAT1YCR077C NUP170P38181 1502 aa8.22□□□□□ -1.09
PAT1YCR077C SAS10Q12136 610 aaPredicted RBP8.21□□□□□ -1.09
PAT1YCR077C SCC2Q04002 1493 aa8.2□□□□□ -1.1
PAT1YCR077C YPK9Q12697 1472 aa8.19□□□□□ -1.1
PAT1YCR077C AVT3P36062 692 aa8.18□□□□□ -1.1
PAT1YCR077C MYO4P32492 1471 aa8.16□□□□□ -1.1
PAT1YCR077C RKR1Q04781 1562 aa8.16□□□□□ -1.1
PAT1YCR077C YOR1P53049 1477 aa8.14□□□□□ -1.11
PAT1YCR077C SSM4P40318 1319 aa8.13□□□□□ -1.11
PAT1YCR077C ENP1P38333 483 aaKnown RBP8.12□□□□□ -1.11
PAT1YCR077C YFR016CP43597 1233 aaKnown RBP8.11□□□□□ -1.11
PAT1YCR077C TY2B-LR1P0C2J3 1770 aa8.08□□□□□ -1.12
PAT1YCR077C TY2B-FP0CX63 1770 aa8.08□□□□□ -1.12
PAT1YCR077C TY2B-GR2P0CX64 1770 aa8.08□□□□□ -1.12
PAT1YCR077C TY2B-CP25384 1770 aa8.08□□□□□ -1.12
PAT1YCR077C TY2B-DR2Q03494 1770 aa8.08□□□□□ -1.12
PAT1YCR077C TY1B-DR1Q03855 1755 aa8.08□□□□□ -1.12
PAT1YCR077C TY2B-DR3Q07791 1770 aaKnown RBP8.08□□□□□ -1.12
PAT1YCR077C TY2B-OR1Q12113 1770 aa8.08□□□□□ -1.12
PAT1YCR077C TY2B-DR1Q12472 1770 aa8.08□□□□□ -1.12
PAT1YCR077C TY2B-OR2Q12501 1770 aa8.08□□□□□ -1.12
PAT1YCR077C YPR148CQ06523 435 aa8.07□□□□□ -1.12
PAT1YCR077C SNQ2P32568 1501 aaKnown RBP8.06□□□□□ -1.12
PAT1YCR077C RPO31P04051 1460 aa8.06□□□□□ -1.12
PAT1YCR077C TY1B-DR3Q99231 1755 aa8.05□□□□□ -1.12
PAT1YCR077C SMC4Q12267 1418 aa8.04□□□□□ -1.12
PAT1YCR077C STH1P32597 1359 aa8.03□□□□□ -1.12
PAT1YCR077C YCF1P39109 1515 aaKnown RBP8.03□□□□□ -1.12
PAT1YCR077C TOP2P06786 1428 aaKnown RBP8.03□□□□□ -1.12
PAT1YCR077C POL5P39985 1022 aaKnown RBP8.03□□□□□ -1.12
PAT1YCR077C MLP2P40457 1679 aa8.02□□□□□ -1.13
PAT1YCR077C TY2B-BQ12491 1770 aa8.01□□□□□ -1.13
PAT1YCR077C GEA1P47102 1408 aaPredicted RBP7.96□□□□□ -1.13
PAT1YCR077C SEC3P33332 1336 aaKnown RBP7.96□□□□□ -1.14
PAT1YCR077C PDR15Q04182 1529 aaKnown RBP7.96□□□□□ -1.14
PAT1YCR077C SPT7P35177 1332 aa7.96□□□□□ -1.14
PAT1YCR077C TSC11P40061 1430 aa7.95□□□□□ -1.14
PAT1YCR077C PAN1P32521 1480 aa7.95□□□□□ -1.14
PAT1YCR077C IFH1P39520 1085 aa7.95□□□□□ -1.14
PAT1YCR077C ULS1Q08562 1619 aa7.94□□□□□ -1.14
PAT1YCR077C PDR10P51533 1564 aa7.93□□□□□ -1.14
PAT1YCR077C TY1B-HO13535 1793 aa7.92□□□□□ -1.14
PAT1YCR077C TY1B-DR5P0C2I2 1755 aa7.92□□□□□ -1.14
PAT1YCR077C TY1B-DR6P0C2I3 1755 aa7.92□□□□□ -1.14
PAT1YCR077C TY1B-LR2P0C2I5 1755 aa7.92□□□□□ -1.14
PAT1YCR077C TY1B-LR3P0C2I6 1755 aaKnown RBP7.92□□□□□ -1.14
PAT1YCR077C TY1B-PR1P0C2I9 1755 aaKnown RBP7.92□□□□□ -1.14
PAT1YCR077C TY1B-PR2P0C2J0 1756 aa7.92□□□□□ -1.14
PAT1YCR077C TY1B-PR3P0C2J1 1755 aaKnown RBP7.92□□□□□ -1.14
PAT1YCR077C TY1B-JR1P47098 1755 aa7.92□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms