RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeastyeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX1YKL197C YJR149WP47177 404 aa3.24□□□□□ -1.89
PEX1YKL197C PEX31P53203 462 aa3.24□□□□□ -1.89
PEX1YKL197C RPS15Q01855 142 aaKnown RBP3.24□□□□□ -1.89
PEX1YKL197C TRM82Q03774 444 aa3.24□□□□□ -1.89
PEX1YKL197C FRQ1Q06389 190 aa3.24□□□□□ -1.89
PEX1YKL197C CDA1Q06702 301 aa3.24□□□□□ -1.89
PEX1YKL197C AAD15Q08361 143 aa3.24□□□□□ -1.89
PEX1YKL197C RIM20Q12033 661 aa3.24□□□□□ -1.89
PEX1YKL197C USB1Q12208 290 aaKnown RBP3.24□□□□□ -1.89
PEX1YKL197C UGA1P17649 471 aa3.24□□□□□ -1.89
PEX1YKL197C VPS33P20795 691 aa3.24□□□□□ -1.89
PEX1YKL197C SPO11P23179 398 aa3.24□□□□□ -1.89
PEX1YKL197C DAL2P25335 343 aa3.24□□□□□ -1.89
PEX1YKL197C SLC1P33333 303 aa3.24□□□□□ -1.89
PEX1YKL197C YKR073CP36153 106 aa3.24□□□□□ -1.89
PEX1YKL197C AGP2P38090 596 aa3.24□□□□□ -1.89
PEX1YKL197C JHD1P40034 492 aa3.24□□□□□ -1.89
PEX1YKL197C TIR3P40552 269 aa3.24□□□□□ -1.89
PEX1YKL197C SMK1P41808 388 aa3.24□□□□□ -1.89
PEX1YKL197C YCH1P42937 148 aa3.24□□□□□ -1.89
PEX1YKL197C YJL043WP47053 257 aa3.24□□□□□ -1.89
PEX1YKL197C YGR017WP53210 297 aa3.24□□□□□ -1.89
PEX1YKL197C TIM13P53299 105 aa3.24□□□□□ -1.89
PEX1YKL197C HCH1P53834 153 aa3.24□□□□□ -1.89
PEX1YKL197C YCL001W-AP87012 153 aa3.24□□□□□ -1.89
PEX1YKL197C SNO1Q03144 224 aa3.24□□□□□ -1.89
PEX1YKL197C NAT4Q04751 285 aa3.24□□□□□ -1.89
PEX1YKL197C GPM2Q12008 311 aa3.24□□□□□ -1.89
PEX1YKL197C SVS1Q12254 260 aa3.24□□□□□ -1.89
PEX1YKL197C HRT3Q12347 344 aa3.24□□□□□ -1.89
PEX1YKL197C CDC28P00546 298 aaKnown RBP3.23□□□□□ -1.89
PEX1YKL197C RPP0P05317 312 aaKnown RBP3.23□□□□□ -1.89
PEX1YKL197C MAS2P11914 482 aa3.23□□□□□ -1.89
PEX1YKL197C SRB5P32585 307 aa3.23□□□□□ -1.89
PEX1YKL197C UTR4P32626 227 aa3.23□□□□□ -1.89
PEX1YKL197C YNK1P36010 153 aaKnown RBP3.23□□□□□ -1.89
PEX1YKL197C APN2P38207 520 aa3.23□□□□□ -1.89
PEX1YKL197C DER1P38307 211 aa3.23□□□□□ -1.89
PEX1YKL197C LEU5P38702 357 aa3.23□□□□□ -1.89
PEX1YKL197C YIL067CP40514 678 aa3.23□□□□□ -1.89
PEX1YKL197C YFR057WP43625 151 aa3.23□□□□□ -1.89
PEX1YKL197C YPR003CP53394 754 aa3.23□□□□□ -1.89
PEX1YKL197C NRD1P53617 575 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
PEX1YKL197C TRM112P53738 135 aaPredicted RBP3.23□□□□□ -1.89
PEX1YKL197C OCA2P53949 197 aa3.23□□□□□ -1.89
PEX1YKL197C ARG5,6Q01217 863 aa3.23□□□□□ -1.89
PEX1YKL197C MRPL13Q02204 264 aa3.23□□□□□ -1.89
PEX1YKL197C IRC15Q02733 499 aa3.23□□□□□ -1.89
PEX1YKL197C YPL199CQ08954 240 aa3.23□□□□□ -1.89
PEX1YKL197C ALG6Q12001 544 aaKnown RBP3.23□□□□□ -1.89
PEX1YKL197C YOR012WQ12351 137 aa3.23□□□□□ -1.89
PEX1YKL197C TPI1P00942 248 aaKnown RBP3.23□□□□□ -1.89
PEX1YKL197C YFR010W-AP0C5N0 62 aa3.23□□□□□ -1.89
PEX1YKL197C PRP45P28004 379 aaPredicted RBP3.23□□□□□ -1.89
PEX1YKL197C NDC1P32500 655 aa3.23□□□□□ -1.89
PEX1YKL197C PRP18P33411 251 aaPredicted RBP3.23□□□□□ -1.89
PEX1YKL197C PRX1P34227 261 aaKnown RBP3.23□□□□□ -1.89
PEX1YKL197C FLO10P36170 1169 aa3.23□□□□□ -1.89
PEX1YKL197C MRPL3P36516 390 aa3.23□□□□□ -1.89
PEX1YKL197C APT2P36973 181 aa3.23□□□□□ -1.89
PEX1YKL197C POP4P38336 279 aa3.23□□□□□ -1.89
PEX1YKL197C SAF1P38352 637 aa3.23□□□□□ -1.89
PEX1YKL197C PRS3P38689 320 aaKnown RBP3.23□□□□□ -1.89
PEX1YKL197C DIA4P38705 446 aaPredicted RBP3.23□□□□□ -1.89
PEX1YKL197C SMF1P38925 575 aa3.23□□□□□ -1.89
PEX1YKL197C PHB2P50085 310 aa3.23□□□□□ -1.89
PEX1YKL197C PMT5P52867 743 aa3.23□□□□□ -1.89
PEX1YKL197C FLC3P53121 802 aa3.23□□□□□ -1.89
PEX1YKL197C YGR079WP53249 370 aa3.23□□□□□ -1.89
PEX1YKL197C OGG1P53397 376 aaPredicted RBP3.23□□□□□ -1.89
PEX1YKL197C TEP1P53916 434 aa3.23□□□□□ -1.89
PEX1YKL197C AQR1P53943 586 aa3.23□□□□□ -1.89
PEX1YKL197C ODC1Q03028 310 aa3.23□□□□□ -1.89
PEX1YKL197C SNO4Q04902 237 aa3.23□□□□□ -1.89
PEX1YKL197C HRD3Q05787 833 aa3.23□□□□□ -1.89
PEX1YKL197C HSP33Q08914 237 aaKnown RBP3.23□□□□□ -1.89
PEX1YKL197C FEX2Q08991 375 aa3.23□□□□□ -1.89
PEX1YKL197C HSP32Q08992 237 aa3.23□□□□□ -1.89
PEX1YKL197C AIM45Q12480 344 aaKnown RBP3.23□□□□□ -1.89
PEX1YKL197C FIG2P25653 1609 aa3.22□□□□□ -1.89
PEX1YKL197C ELO2P25358 347 aa3.22□□□□□ -1.89
PEX1YKL197C ERG9P29704 444 aa3.22□□□□□ -1.89
PEX1YKL197C YKR075CP36155 307 aa3.22□□□□□ -1.89
PEX1YKL197C YKR078WP36158 585 aaKnown RBP3.22□□□□□ -1.89
PEX1YKL197C IML3P38265 245 aa3.22□□□□□ -1.89
PEX1YKL197C MAD2P40958 196 aa3.22□□□□□ -1.89
PEX1YKL197C MAF1P41910 395 aa3.22□□□□□ -1.89
PEX1YKL197C YJR011CP47086 261 aaPredicted RBP3.22□□□□□ -1.89
PEX1YKL197C CTF18P49956 741 aa3.22□□□□□ -1.89
PEX1YKL197C CWC23P52868 283 aaPredicted RBP3.22□□□□□ -1.89
PEX1YKL197C TIM8P57744 87 aa3.22□□□□□ -1.89
PEX1YKL197C MSC1Q03104 513 aa3.22□□□□□ -1.89
PEX1YKL197C SCS7Q03529 384 aa3.22□□□□□ -1.89
PEX1YKL197C TPP1Q03796 238 aa3.22□□□□□ -1.89
PEX1YKL197C MUS81Q04149 632 aaPredicted RBP3.22□□□□□ -1.89
PEX1YKL197C YTM1Q12024 460 aaPredicted RBP3.22□□□□□ -1.89
PEX1YKL197C YLR046CQ12253 270 aa3.22□□□□□ -1.89
PEX1YKL197C TPO4Q12256 659 aa3.22□□□□□ -1.89
PEX1YKL197C ERG27Q12452 347 aaKnown RBP3.22□□□□□ -1.89
PEX1YKL197C MF(ALPHA)1P01149 165 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms