Protein–RNA interactions for Protein: Q08954

YPL199C, Smr domain-containing protein YPL199C, yeastyeast

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL199CQ08954 NSR1YGR159C 1245 nt17.82■□□□□ 0.44
YPL199CQ08954 YML009W-BYML009W-B 477 nt17.34■□□□□ 0.37
YPL199CQ08954 NOP1YDL014W 984 nt16.68■□□□□ 0.26
YPL199CQ08954 MDJ1YFL016C 1536 nt16.31■□□□□ 0.2
YPL199CQ08954 YJL027CYJL027C 417 nt15.05■□□□□ -0
YPL199CQ08954 YKL036CYKL036C 393 nt14.78□□□□□ -0.04
YPL199CQ08954 SRX1YKL086W 384 nt14.54□□□□□ -0.08
YPL199CQ08954 Q0297Q0297 156 nt14.37□□□□□ -0.11
YPL199CQ08954 DBP2YNL112W 1641 nt14.2□□□□□ -0.14
YPL199CQ08954 YBR190WYBR190W 312 nt14.14□□□□□ -0.15
YPL199CQ08954 SSA3YBL075C 1950 nt13.89□□□□□ -0.19
YPL199CQ08954 RTC3YHR087W 336 nt13.76□□□□□ -0.21
YPL199CQ08954 YCR051WYCR051W 669 nt13.72□□□□□ -0.21
YPL199CQ08954 TRN1tP(UGG)A 72 nt13.49□□□□□ -0.25
YPL199CQ08954 SUF9tP(UGG)F 72 nt13.49□□□□□ -0.25
YPL199CQ08954 SUF8tP(UGG)H 72 nt13.49□□□□□ -0.25
YPL199CQ08954 tP(UGG)LtP(UGG)L 72 nt13.49□□□□□ -0.25
YPL199CQ08954 SUF7tP(UGG)M 72 nt13.49□□□□□ -0.25
YPL199CQ08954 tP(UGG)N1tP(UGG)N1 72 nt13.49□□□□□ -0.25
YPL199CQ08954 tP(UGG)N2tP(UGG)N2 72 nt13.49□□□□□ -0.25
YPL199CQ08954 tP(UGG)O1tP(UGG)O1 72 nt13.49□□□□□ -0.25
YPL199CQ08954 SUF11tP(UGG)O2 72 nt13.49□□□□□ -0.25
YPL199CQ08954 CCC1YLR220W 969 nt13.32□□□□□ -0.28
YPL199CQ08954 RVS167YDR388W 1449 nt13.28□□□□□ -0.28
YPL199CQ08954 PUT4YOR348C 1884 nt13.27□□□□□ -0.28
YPL199CQ08954 SCS3YGL126W 1143 nt13.09□□□□□ -0.31
YPL199CQ08954 SCJ1YMR214W 1134 nt12.99□□□□□ -0.33
YPL199CQ08954 RPP1BYDL130W 321 nt12.89□□□□□ -0.35
YPL199CQ08954 ARE1YCR048W 1833 nt12.83□□□□□ -0.35
YPL199CQ08954 YOL085CYOL085C 342 nt12.81□□□□□ -0.36
YPL199CQ08954 POA1YBR022W 534 nt12.8□□□□□ -0.36
YPL199CQ08954 YHR049C-AYHR049C-A 297 nt12.67□□□□□ -0.38
YPL199CQ08954 SAH1YER043C 1350 nt12.66□□□□□ -0.38
YPL199CQ08954 SHR5YOL110W 714 nt12.65□□□□□ -0.38
YPL199CQ08954 URN1YPR152C 1398 nt12.65□□□□□ -0.38
YPL199CQ08954 PKP1YIL042C 1185 nt12.64□□□□□ -0.39
YPL199CQ08954 BSC6YOL137W 1494 nt12.64□□□□□ -0.39
YPL199CQ08954 OPI9YLR338W 858 nt12.62□□□□□ -0.39
YPL199CQ08954 tP(UGG)O3tP(UGG)O3 72 nt12.56□□□□□ -0.4
YPL199CQ08954 SPT5YML010W 3192 nt12.52□□□□□ -0.41
YPL199CQ08954 DEP1YAL013W 1218 nt12.44□□□□□ -0.42
YPL199CQ08954 RPN10YHR200W 807 nt12.38□□□□□ -0.43
YPL199CQ08954 SSA4YER103W 1929 nt12.37□□□□□ -0.43
YPL199CQ08954 PET122YER153C 765 nt12.35□□□□□ -0.43
YPL199CQ08954 BUD23YCR047C 828 nt12.33□□□□□ -0.44
YPL199CQ08954 PUN1YLR414C 792 nt12.26□□□□□ -0.45
YPL199CQ08954 YNL208WYNL208W 600 nt12.25□□□□□ -0.45
YPL199CQ08954 PTC2YER089C 1395 nt12.18□□□□□ -0.46
YPL199CQ08954 YDJ1YNL064C 1230 nt12.18□□□□□ -0.46
YPL199CQ08954 NAB2YGL122C 1578 nt12.14□□□□□ -0.47
YPL199CQ08954 SCR1SCR1 522 nt12.11□□□□□ -0.47
YPL199CQ08954 YJR018WYJR018W 363 nt12.05□□□□□ -0.48
YPL199CQ08954 GAR1YHR089C 618 nt11.97□□□□□ -0.49
YPL199CQ08954 BDF1YLR399C 2061 nt11.96□□□□□ -0.49
YPL199CQ08954 MEP2YNL142W 1500 nt11.95□□□□□ -0.5
YPL199CQ08954 RRN5YLR141W 1092 nt11.94□□□□□ -0.5
YPL199CQ08954 DAL1YIR027C 1383 nt11.85□□□□□ -0.51
YPL199CQ08954 FIS1YIL065C 468 nt11.85□□□□□ -0.51
YPL199CQ08954 TAT1YBR069C 1860 nt11.79□□□□□ -0.52
YPL199CQ08954 FPR4YLR449W 1179 nt11.78□□□□□ -0.52
YPL199CQ08954 INM2YDR287W 879 nt11.73□□□□□ -0.53
YPL199CQ08954 YPS1YLR120C 1710 nt11.72□□□□□ -0.53
YPL199CQ08954 PHO4YFR034C 939 nt11.72□□□□□ -0.53
YPL199CQ08954 YER088W-BYER088W-B 147 nt11.7□□□□□ -0.54
YPL199CQ08954 DCW1YKL046C 1350 nt11.69□□□□□ -0.54
YPL199CQ08954 RPP2BYDR382W 333 nt11.67□□□□□ -0.54
YPL199CQ08954 YJR120WYJR120W 351 nt11.67□□□□□ -0.54
YPL199CQ08954 YHR165W-AYHR165W-A 312 nt11.63□□□□□ -0.55
YPL199CQ08954 TIR1YER011W 765 nt11.61□□□□□ -0.55
YPL199CQ08954 YMR090WYMR090W 684 nt11.6□□□□□ -0.55
YPL199CQ08954 SSA1YAL005C 1929 nt11.58□□□□□ -0.56
YPL199CQ08954 EMI2YDR516C 1503 nt11.57□□□□□ -0.56
YPL199CQ08954 ATS1YAL020C 1002 nt11.57□□□□□ -0.56
YPL199CQ08954 YBR220CYBR220C 1683 nt11.55□□□□□ -0.56
YPL199CQ08954 YDR095CYDR095C 411 nt11.55□□□□□ -0.56
YPL199CQ08954 RSB1YOR049C 1065 nt11.52□□□□□ -0.57
YPL199CQ08954 PAC11YDR488C 1602 nt11.49□□□□□ -0.57
YPL199CQ08954 YBL100CYBL100C 315 nt11.48□□□□□ -0.57
YPL199CQ08954 YDL221WYDL221W 552 nt11.43□□□□□ -0.58
YPL199CQ08954 SDH1YKL148C 1923 nt11.41□□□□□ -0.58
YPL199CQ08954 RPP2AYOL039W 321 nt11.34□□□□□ -0.59
YPL199CQ08954 CAC2YML102W 1407 nt11.34□□□□□ -0.59
YPL199CQ08954 FUN26YAL022C 1554 nt11.33□□□□□ -0.6
YPL199CQ08954 PTP1YDL230W 1008 nt11.32□□□□□ -0.6
YPL199CQ08954 BDH2YAL061W 1254 nt11.31□□□□□ -0.6
YPL199CQ08954 ALF1YNL148C 765 nt11.31□□□□□ -0.6
YPL199CQ08954 SEC11YIR022W 504 nt11.29□□□□□ -0.6
YPL199CQ08954 PCH2YBR186W 1695 nt11.29□□□□□ -0.6
YPL199CQ08954 SCC4YER147C 1875 nt11.25□□□□□ -0.61
YPL199CQ08954 GUT2YIL155C 1950 nt11.24□□□□□ -0.61
YPL199CQ08954 TRM9YML014W 840 nt11.22□□□□□ -0.61
YPL199CQ08954 SRB2YHR041C 633 nt11.2□□□□□ -0.62
YPL199CQ08954 YJL225CYJL225C 5277 nt11.17□□□□□ -0.62
YPL199CQ08954 IRC15YPL017C 1500 nt11.17□□□□□ -0.62
YPL199CQ08954 SIS1YNL007C 1059 nt11.15□□□□□ -0.62
YPL199CQ08954 NVJ2YPR091C 2313 nt11.13□□□□□ -0.63
YPL199CQ08954 CCT6YDR188W 1641 nt11.13□□□□□ -0.63
YPL199CQ08954 GIS3YLR094C 1509 nt11.12□□□□□ -0.63
YPL199CQ08954 SUF2tP(AGG)C 72 nt11.11□□□□□ -0.63
YPL199CQ08954 SUF10tP(AGG)N 72 nt11.11□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms