Protein–RNA interactions for Protein: P29704

ERG9, Squalene synthase, yeastyeast

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ERG9P29704 YML009W-BYML009W-B 477 nt18.27■□□□□ 0.52
ERG9P29704 NSR1YGR159C 1245 nt18.04■□□□□ 0.48
ERG9P29704 NOP1YDL014W 984 nt17.9■□□□□ 0.46
ERG9P29704 YKL036CYKL036C 393 nt16.67■□□□□ 0.26
ERG9P29704 MDJ1YFL016C 1536 nt16.18■□□□□ 0.18
ERG9P29704 Q0297Q0297 156 nt15.73■□□□□ 0.11
ERG9P29704 SRX1YKL086W 384 nt15.62■□□□□ 0.09
ERG9P29704 YJL027CYJL027C 417 nt15.59■□□□□ 0.09
ERG9P29704 SCS3YGL126W 1143 nt15.25■□□□□ 0.03
ERG9P29704 YCR051WYCR051W 669 nt14.81□□□□□ -0.04
ERG9P29704 YOL085CYOL085C 342 nt14.42□□□□□ -0.1
ERG9P29704 PKP1YIL042C 1185 nt14.13□□□□□ -0.15
ERG9P29704 DBP2YNL112W 1641 nt14.12□□□□□ -0.15
ERG9P29704 RPP1BYDL130W 321 nt14.1□□□□□ -0.15
ERG9P29704 TRN1tP(UGG)A 72 nt14□□□□□ -0.17
ERG9P29704 SUF9tP(UGG)F 72 nt14□□□□□ -0.17
ERG9P29704 SUF8tP(UGG)H 72 nt14□□□□□ -0.17
ERG9P29704 tP(UGG)LtP(UGG)L 72 nt14□□□□□ -0.17
ERG9P29704 SUF7tP(UGG)M 72 nt14□□□□□ -0.17
ERG9P29704 tP(UGG)N1tP(UGG)N1 72 nt14□□□□□ -0.17
ERG9P29704 tP(UGG)N2tP(UGG)N2 72 nt14□□□□□ -0.17
ERG9P29704 tP(UGG)O1tP(UGG)O1 72 nt14□□□□□ -0.17
ERG9P29704 SUF11tP(UGG)O2 72 nt14□□□□□ -0.17
ERG9P29704 YBR190WYBR190W 312 nt14□□□□□ -0.17
ERG9P29704 SSA3YBL075C 1950 nt13.88□□□□□ -0.19
ERG9P29704 CCC1YLR220W 969 nt13.82□□□□□ -0.2
ERG9P29704 SCJ1YMR214W 1134 nt13.81□□□□□ -0.2
ERG9P29704 ATS1YAL020C 1002 nt13.7□□□□□ -0.22
ERG9P29704 RTC3YHR087W 336 nt13.58□□□□□ -0.24
ERG9P29704 PET122YER153C 765 nt13.42□□□□□ -0.26
ERG9P29704 SCR1SCR1 522 nt13.37□□□□□ -0.27
ERG9P29704 tP(UGG)O3tP(UGG)O3 72 nt13.3□□□□□ -0.28
ERG9P29704 RVS167YDR388W 1449 nt13.3□□□□□ -0.28
ERG9P29704 PUT4YOR348C 1884 nt13.21□□□□□ -0.3
ERG9P29704 RRN5YLR141W 1092 nt13.05□□□□□ -0.32
ERG9P29704 YDJ1YNL064C 1230 nt12.9□□□□□ -0.34
ERG9P29704 SHR5YOL110W 714 nt12.87□□□□□ -0.35
ERG9P29704 RSB1YOR049C 1065 nt12.84□□□□□ -0.35
ERG9P29704 YER088W-BYER088W-B 147 nt12.8□□□□□ -0.36
ERG9P29704 ARE1YCR048W 1833 nt12.78□□□□□ -0.36
ERG9P29704 POA1YBR022W 534 nt12.68□□□□□ -0.38
ERG9P29704 PST2YDR032C 597 nt12.67□□□□□ -0.38
ERG9P29704 YHR049C-AYHR049C-A 297 nt12.57□□□□□ -0.4
ERG9P29704 SPT5YML010W 3192 nt12.56□□□□□ -0.4
ERG9P29704 BSC6YOL137W 1494 nt12.55□□□□□ -0.4
ERG9P29704 SAH1YER043C 1350 nt12.55□□□□□ -0.4
ERG9P29704 GAR1YHR089C 618 nt12.52□□□□□ -0.41
ERG9P29704 URN1YPR152C 1398 nt12.52□□□□□ -0.41
ERG9P29704 OPI9YLR338W 858 nt12.5□□□□□ -0.41
ERG9P29704 DEP1YAL013W 1218 nt12.38□□□□□ -0.43
ERG9P29704 SSA4YER103W 1929 nt12.34□□□□□ -0.43
ERG9P29704 RPN10YHR200W 807 nt12.28□□□□□ -0.44
ERG9P29704 YNL208WYNL208W 600 nt12.27□□□□□ -0.45
ERG9P29704 YKL097CYKL097C 411 nt12.26□□□□□ -0.45
ERG9P29704 BUD23YCR047C 828 nt12.18□□□□□ -0.46
ERG9P29704 TIR1YER011W 765 nt12.13□□□□□ -0.47
ERG9P29704 PUN1YLR414C 792 nt12.12□□□□□ -0.47
ERG9P29704 SHU1YHL006C 453 nt12.08□□□□□ -0.48
ERG9P29704 PTC2YER089C 1395 nt12.05□□□□□ -0.48
ERG9P29704 NAB2YGL122C 1578 nt12.01□□□□□ -0.49
ERG9P29704 BDF1YLR399C 2061 nt11.98□□□□□ -0.49
ERG9P29704 SSA1YAL005C 1929 nt11.92□□□□□ -0.5
ERG9P29704 YJR018WYJR018W 363 nt11.9□□□□□ -0.5
ERG9P29704 MEP2YNL142W 1500 nt11.86□□□□□ -0.51
ERG9P29704 FIS1YIL065C 468 nt11.81□□□□□ -0.52
ERG9P29704 YAL037C-BYAL037C-B 975 nt11.81□□□□□ -0.52
ERG9P29704 TAT1YBR069C 1860 nt11.8□□□□□ -0.52
ERG9P29704 DAL1YIR027C 1383 nt11.73□□□□□ -0.53
ERG9P29704 SRB2YHR041C 633 nt11.72□□□□□ -0.53
ERG9P29704 YOR139CYOR139C 393 nt11.72□□□□□ -0.53
ERG9P29704 RPP2BYDR382W 333 nt11.66□□□□□ -0.54
ERG9P29704 YJR120WYJR120W 351 nt11.66□□□□□ -0.54
ERG9P29704 YGR021WYGR021W 873 nt11.65□□□□□ -0.54
ERG9P29704 DCW1YKL046C 1350 nt11.65□□□□□ -0.55
ERG9P29704 YPS1YLR120C 1710 nt11.64□□□□□ -0.55
ERG9P29704 PHO4YFR034C 939 nt11.62□□□□□ -0.55
ERG9P29704 FPR4YLR449W 1179 nt11.61□□□□□ -0.55
ERG9P29704 WWM1YFL010C 636 nt11.6□□□□□ -0.55
ERG9P29704 NPL3YDR432W 1245 nt11.59□□□□□ -0.55
ERG9P29704 HOM6YJR139C 1080 nt11.59□□□□□ -0.55
ERG9P29704 INM2YDR287W 879 nt11.57□□□□□ -0.56
ERG9P29704 MNP1YGL068W 585 nt11.52□□□□□ -0.57
ERG9P29704 YBR220CYBR220C 1683 nt11.51□□□□□ -0.57
ERG9P29704 YHR165W-AYHR165W-A 312 nt11.49□□□□□ -0.57
ERG9P29704 EMI2YDR516C 1503 nt11.48□□□□□ -0.57
ERG9P29704 YDR095CYDR095C 411 nt11.47□□□□□ -0.57
ERG9P29704 YOL037CYOL037C 354 nt11.47□□□□□ -0.57
ERG9P29704 YFL021C-AYFL021C-A 855 nt11.46□□□□□ -0.57
ERG9P29704 BDH2YAL061W 1254 nt11.45□□□□□ -0.58
ERG9P29704 YMR090WYMR090W 684 nt11.44□□□□□ -0.58
ERG9P29704 PAC11YDR488C 1602 nt11.42□□□□□ -0.58
ERG9P29704 RKM5YLR137W 1104 nt11.41□□□□□ -0.58
ERG9P29704 YDL221WYDL221W 552 nt11.36□□□□□ -0.59
ERG9P29704 LSM3YLR438C-A 270 nt11.36□□□□□ -0.59
ERG9P29704 YBL100CYBL100C 315 nt11.36□□□□□ -0.59
ERG9P29704 SDH1YKL148C 1923 nt11.35□□□□□ -0.59
ERG9P29704 CAC2YML102W 1407 nt11.27□□□□□ -0.6
ERG9P29704 PTP1YDL230W 1008 nt11.27□□□□□ -0.61
ERG9P29704 tM(CAU)CtM(CAU)C 72 nt11.25□□□□□ -0.61
ERG9P29704 IMT4tM(CAU)E 72 nt11.25□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms