RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W YDL086WQ07505 273 aa2.26□□□□□ -2.05
SPF1YEL031W BUD20Q08004 166 aaPredicted RBP2.26□□□□□ -2.05
SPF1YEL031W GPB1Q08886 897 aa2.26□□□□□ -2.05
SPF1YEL031W AKR2Q12013 749 aa2.26□□□□□ -2.05
SPF1YEL031W TIF6Q12522 245 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W TIM9O74700 87 aa2.26□□□□□ -2.05
SPF1YEL031W TRP4P07285 380 aaPredicted RBP2.26□□□□□ -2.05
SPF1YEL031W ERG20P08524 352 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W APE1P14904 514 aa2.26□□□□□ -2.05
SPF1YEL031W YCP4P25349 247 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W MSK1P32048 576 aa2.26□□□□□ -2.05
SPF1YEL031W STE14P32584 239 aa2.26□□□□□ -2.05
SPF1YEL031W UTR2P32623 467 aa2.26□□□□□ -2.05
SPF1YEL031W VPS17P32913 551 aa2.26□□□□□ -2.05
SPF1YEL031W SFC1P33303 322 aa2.26□□□□□ -2.05
SPF1YEL031W MGE1P38523 228 aa2.26□□□□□ -2.05
SPF1YEL031W NEM1P38757 446 aa2.26□□□□□ -2.05
SPF1YEL031W UBA4P38820 440 aa2.26□□□□□ -2.05
SPF1YEL031W CTF8P38877 133 aa2.26□□□□□ -2.05
SPF1YEL031W CHL4P38907 458 aa2.26□□□□□ -2.05
SPF1YEL031W FET3P38993 636 aa2.26□□□□□ -2.05
SPF1YEL031W PHO90P39535 881 aa2.26□□□□□ -2.05
SPF1YEL031W NOP16P40007 231 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W PAN6P40459 309 aa2.26□□□□□ -2.05
SPF1YEL031W YFL040WP43562 540 aa2.26□□□□□ -2.05
SPF1YEL031W AVT1P47082 602 aa2.26□□□□□ -2.05
SPF1YEL031W CCC1P47818 322 aa2.26□□□□□ -2.05
SPF1YEL031W LYS20P48570 428 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W RSM27P53305 110 aa2.26□□□□□ -2.05
SPF1YEL031W ALG12P53730 551 aa2.26□□□□□ -2.05
SPF1YEL031W NAM8Q00539 523 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
SPF1YEL031W SRP1Q02821 542 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W CUE4Q04201 117 aaPredicted RBP2.26□□□□□ -2.05
SPF1YEL031W VBA1Q04301 562 aa2.26□□□□□ -2.05
SPF1YEL031W AIM32Q04689 311 aa2.26□□□□□ -2.05
SPF1YEL031W RIF2Q06208 395 aa2.26□□□□□ -2.05
SPF1YEL031W MHR1Q06630 226 aa2.26□□□□□ -2.05
SPF1YEL031W PUN1Q06991 263 aa2.26□□□□□ -2.05
SPF1YEL031W ESC8Q08119 714 aa2.26□□□□□ -2.05
SPF1YEL031W YTM1Q12024 460 aaPredicted RBP2.26□□□□□ -2.05
SPF1YEL031W FCF2Q12035 217 aaPredicted RBP2.26□□□□□ -2.05
SPF1YEL031W REC8Q12188 680 aa2.26□□□□□ -2.05
SPF1YEL031W YPL247CQ12523 523 aa2.26□□□□□ -2.05
SPF1YEL031W CTF3Q12748 733 aa2.26□□□□□ -2.05
SPF1YEL031W YDL085C-AQ3E7B7 68 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W TFB5Q3E7C1 72 aaPredicted RBP2.26□□□□□ -2.05
SPF1YEL031W RIF1P29539 1916 aa2.26□□□□□ -2.05
SPF1YEL031W CAN1P04817 590 aa2.25□□□□□ -2.05
SPF1YEL031W KIN28P06242 306 aa2.25□□□□□ -2.05
SPF1YEL031W ADH3P07246 375 aaKnown RBP2.25□□□□□ -2.05
SPF1YEL031W CHS1P08004 1131 aa2.25□□□□□ -2.05
SPF1YEL031W YFR010W-AP0C5N0 62 aa2.25□□□□□ -2.05
SPF1YEL031W MAS2P11914 482 aa2.25□□□□□ -2.05
SPF1YEL031W HNM1P19807 563 aa2.25□□□□□ -2.05
SPF1YEL031W YCL002CP25565 263 aa2.25□□□□□ -2.05
SPF1YEL031W LRE1P25579 583 aaKnown RBP2.25□□□□□ -2.05
SPF1YEL031W BUB3P26449 341 aa2.25□□□□□ -2.05
SPF1YEL031W YIM1P28625 365 aa2.25□□□□□ -2.05
SPF1YEL031W PUB1P32588 453 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05 RIP-Chip
SPF1YEL031W SFA1P32771 386 aa2.25□□□□□ -2.05
SPF1YEL031W ORC2P32833 620 aa2.25□□□□□ -2.05
SPF1YEL031W ECT1P33412 323 aa2.25□□□□□ -2.05
SPF1YEL031W KAE1P36132 386 aa2.25□□□□□ -2.05
SPF1YEL031W APE3P37302 537 aaKnown RBP2.25□□□□□ -2.05
SPF1YEL031W ERT1P38140 529 aa2.25□□□□□ -2.05
SPF1YEL031W SEA4P38164 1038 aa2.25□□□□□ -2.05
SPF1YEL031W RRN10P38204 145 aa2.25□□□□□ -2.05
SPF1YEL031W RAD55P38953 406 aa2.25□□□□□ -2.05
SPF1YEL031W DHH1P39517 506 aaKnown RBP2.25□□□□□ -2.05
SPF1YEL031W SMB1P40018 196 aaKnown RBP2.25□□□□□ -2.05
SPF1YEL031W FMC1P40491 155 aa2.25□□□□□ -2.05
SPF1YEL031W PTR3P43606 678 aa2.25□□□□□ -2.05
SPF1YEL031W RPS10BP46784 105 aaKnown RBP2.25□□□□□ -2.05
SPF1YEL031W PFD1P46988 109 aa2.25□□□□□ -2.05
SPF1YEL031W BUL1P48524 976 aa2.25□□□□□ -2.05
SPF1YEL031W COG7P53195 279 aa2.25□□□□□ -2.05
SPF1YEL031W SAE3P89114 91 aa2.25□□□□□ -2.05
SPF1YEL031W GRX5Q02784 150 aa2.25□□□□□ -2.05
SPF1YEL031W PEX30Q06169 523 aa2.25□□□□□ -2.05
SPF1YEL031W RPS10AQ08745 105 aaPredicted RBP2.25□□□□□ -2.05
SPF1YEL031W YPL272CQ08984 517 aa2.25□□□□□ -2.05
SPF1YEL031W ATX2Q12067 313 aa2.25□□□□□ -2.05
SPF1YEL031W UBX3Q12229 455 aa2.25□□□□□ -2.05
SPF1YEL031W SVS1Q12254 260 aa2.25□□□□□ -2.05
SPF1YEL031W TY1A-NL1Q12391 440 aaKnown RBP2.25□□□□□ -2.05
SPF1YEL031W YMR084WA2P2R3 262 aa2.25□□□□□ -2.05
SPF1YEL031W ARG81P05085 880 aa2.25□□□□□ -2.05
SPF1YEL031W DED1P06634 604 aaKnown RBP2.25□□□□□ -2.05
SPF1YEL031W SWI5P08153 709 aa2.25□□□□□ -2.05
SPF1YEL031W RPB3P16370 318 aaKnown RBP2.25□□□□□ -2.05
SPF1YEL031W STP22P25604 385 aa2.25□□□□□ -2.05
SPF1YEL031W YCR102CP25608 368 aa2.25□□□□□ -2.05
SPF1YEL031W SEF1P34228 1148 aa2.25□□□□□ -2.05
SPF1YEL031W OAR1P35731 278 aa2.25□□□□□ -2.05
SPF1YEL031W SFK1P35735 353 aa2.25□□□□□ -2.05
SPF1YEL031W DOA1P36037 715 aa2.25□□□□□ -2.05
SPF1YEL031W ELF1P36053 145 aa2.25□□□□□ -2.05
SPF1YEL031W RPF2P36160 344 aaKnown RBP2.25□□□□□ -2.05
SPF1YEL031W MAL32P38158 584 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms