Protein–RNA interactions for Protein: Q04201

CUE4, CUE domain-containing protein CUE4, yeastyeast

Predicted RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE4Q04201 NSR1YGR159C 1245 nt15.13■□□□□ 0.01
CUE4Q04201 YML009W-BYML009W-B 477 nt14.45□□□□□ -0.1
CUE4Q04201 MDJ1YFL016C 1536 nt14.25□□□□□ -0.13
CUE4Q04201 NOP1YDL014W 984 nt13.7□□□□□ -0.22
CUE4Q04201 SSA3YBL075C 1950 nt13.34□□□□□ -0.27
CUE4Q04201 YJL027CYJL027C 417 nt13.08□□□□□ -0.32
CUE4Q04201 YBR190WYBR190W 312 nt12.4□□□□□ -0.42
CUE4Q04201 DBP2YNL112W 1641 nt12.25□□□□□ -0.45
CUE4Q04201 RTC3YHR087W 336 nt12.08□□□□□ -0.48
CUE4Q04201 SRX1YKL086W 384 nt11.95□□□□□ -0.5
CUE4Q04201 PUT4YOR348C 1884 nt11.92□□□□□ -0.5
CUE4Q04201 YKL036CYKL036C 393 nt11.81□□□□□ -0.52
CUE4Q04201 Q0297Q0297 156 nt11.69□□□□□ -0.54
CUE4Q04201 SSA4YER103W 1929 nt11.58□□□□□ -0.56
CUE4Q04201 SPT5YML010W 3192 nt11.52□□□□□ -0.57
CUE4Q04201 POA1YBR022W 534 nt11.48□□□□□ -0.57
CUE4Q04201 ARE1YCR048W 1833 nt11.43□□□□□ -0.58
CUE4Q04201 BSC6YOL137W 1494 nt11.4□□□□□ -0.58
CUE4Q04201 RVS167YDR388W 1449 nt11.35□□□□□ -0.59
CUE4Q04201 TRN1tP(UGG)A 72 nt11.33□□□□□ -0.6
CUE4Q04201 SUF9tP(UGG)F 72 nt11.33□□□□□ -0.6
CUE4Q04201 SUF8tP(UGG)H 72 nt11.33□□□□□ -0.6
CUE4Q04201 tP(UGG)LtP(UGG)L 72 nt11.33□□□□□ -0.6
CUE4Q04201 SUF7tP(UGG)M 72 nt11.33□□□□□ -0.6
CUE4Q04201 tP(UGG)N1tP(UGG)N1 72 nt11.33□□□□□ -0.6
CUE4Q04201 tP(UGG)N2tP(UGG)N2 72 nt11.33□□□□□ -0.6
CUE4Q04201 tP(UGG)O1tP(UGG)O1 72 nt11.33□□□□□ -0.6
CUE4Q04201 SUF11tP(UGG)O2 72 nt11.33□□□□□ -0.6
CUE4Q04201 YHR049C-AYHR049C-A 297 nt11.3□□□□□ -0.6
CUE4Q04201 YCR051WYCR051W 669 nt11.28□□□□□ -0.6
CUE4Q04201 BDF1YLR399C 2061 nt11.23□□□□□ -0.61
CUE4Q04201 CCC1YLR220W 969 nt11.21□□□□□ -0.61
CUE4Q04201 PAC11YDR488C 1602 nt11.2□□□□□ -0.62
CUE4Q04201 SAH1YER043C 1350 nt11.15□□□□□ -0.63
CUE4Q04201 SCJ1YMR214W 1134 nt11.07□□□□□ -0.64
CUE4Q04201 TAT1YBR069C 1860 nt11.05□□□□□ -0.64
CUE4Q04201 URN1YPR152C 1398 nt11.03□□□□□ -0.64
CUE4Q04201 OPI9YLR338W 858 nt11□□□□□ -0.65
CUE4Q04201 BUD23YCR047C 828 nt10.97□□□□□ -0.65
CUE4Q04201 NVJ2YPR091C 2313 nt10.92□□□□□ -0.66
CUE4Q04201 MEP2YNL142W 1500 nt10.8□□□□□ -0.68
CUE4Q04201 SHR5YOL110W 714 nt10.72□□□□□ -0.69
CUE4Q04201 DEP1YAL013W 1218 nt10.71□□□□□ -0.69
CUE4Q04201 PTC2YER089C 1395 nt10.69□□□□□ -0.7
CUE4Q04201 PUN1YLR414C 792 nt10.68□□□□□ -0.7
CUE4Q04201 NAB2YGL122C 1578 nt10.68□□□□□ -0.7
CUE4Q04201 RPN10YHR200W 807 nt10.62□□□□□ -0.71
CUE4Q04201 DCW1YKL046C 1350 nt10.61□□□□□ -0.71
CUE4Q04201 YBR220CYBR220C 1683 nt10.55□□□□□ -0.72
CUE4Q04201 YOL085CYOL085C 342 nt10.51□□□□□ -0.73
CUE4Q04201 RPP1BYDL130W 321 nt10.48□□□□□ -0.73
CUE4Q04201 YMR090WYMR090W 684 nt10.47□□□□□ -0.73
CUE4Q04201 YNL208WYNL208W 600 nt10.45□□□□□ -0.74
CUE4Q04201 EMI2YDR516C 1503 nt10.44□□□□□ -0.74
CUE4Q04201 tP(UGG)O3tP(UGG)O3 72 nt10.43□□□□□ -0.74
CUE4Q04201 FPS1YLL043W 2010 nt10.42□□□□□ -0.74
CUE4Q04201 FIS1YIL065C 468 nt10.42□□□□□ -0.74
CUE4Q04201 YJR018WYJR018W 363 nt10.42□□□□□ -0.74
CUE4Q04201 PCH2YBR186W 1695 nt10.41□□□□□ -0.74
CUE4Q04201 GUT2YIL155C 1950 nt10.39□□□□□ -0.75
CUE4Q04201 YPS1YLR120C 1710 nt10.38□□□□□ -0.75
CUE4Q04201 DAL1YIR027C 1383 nt10.37□□□□□ -0.75
CUE4Q04201 SDH1YKL148C 1923 nt10.34□□□□□ -0.75
CUE4Q04201 YHR165W-AYHR165W-A 312 nt10.33□□□□□ -0.76
CUE4Q04201 SEC11YIR022W 504 nt10.33□□□□□ -0.76
CUE4Q04201 FPR4YLR449W 1179 nt10.32□□□□□ -0.76
CUE4Q04201 YDL221WYDL221W 552 nt10.28□□□□□ -0.76
CUE4Q04201 PHO4YFR034C 939 nt10.27□□□□□ -0.77
CUE4Q04201 SCS3YGL126W 1143 nt10.27□□□□□ -0.77
CUE4Q04201 PKP1YIL042C 1185 nt10.2□□□□□ -0.78
CUE4Q04201 YDR095CYDR095C 411 nt10.18□□□□□ -0.78
CUE4Q04201 PIB2YGL023C 1908 nt10.17□□□□□ -0.78
CUE4Q04201 INM2YDR287W 879 nt10.17□□□□□ -0.78
CUE4Q04201 SCC4YER147C 1875 nt10.14□□□□□ -0.79
CUE4Q04201 PET122YER153C 765 nt10.12□□□□□ -0.79
CUE4Q04201 CAC2YML102W 1407 nt10.12□□□□□ -0.79
CUE4Q04201 UME6YDR207C 2511 nt10.12□□□□□ -0.79
CUE4Q04201 YDJ1YNL064C 1230 nt10.1□□□□□ -0.79
CUE4Q04201 RTF1YGL244W 1677 nt10.06□□□□□ -0.8
CUE4Q04201 YJR120WYJR120W 351 nt10.05□□□□□ -0.8
CUE4Q04201 BOR1YNL275W 1731 nt10.04□□□□□ -0.8
CUE4Q04201 PTP1YDL230W 1008 nt10.03□□□□□ -0.8
CUE4Q04201 YSC84YHR016C 1407 nt10.01□□□□□ -0.81
CUE4Q04201 GAR1YHR089C 618 nt10.01□□□□□ -0.81
CUE4Q04201 RPP2AYOL039W 321 nt9.99□□□□□ -0.81
CUE4Q04201 RPP2BYDR382W 333 nt9.98□□□□□ -0.81
CUE4Q04201 IRC15YPL017C 1500 nt9.97□□□□□ -0.81
CUE4Q04201 BOP3YNL042W 1191 nt9.93□□□□□ -0.82
CUE4Q04201 GIS3YLR094C 1509 nt9.92□□□□□ -0.82
CUE4Q04201 YHL050CYHL050C 2094 nt9.92□□□□□ -0.82
CUE4Q04201 YBL100CYBL100C 315 nt9.91□□□□□ -0.82
CUE4Q04201 PTK1YKL198C 1989 nt9.9□□□□□ -0.82
CUE4Q04201 YJL225CYJL225C 5277 nt9.86□□□□□ -0.83
CUE4Q04201 ALF1YNL148C 765 nt9.83□□□□□ -0.84
CUE4Q04201 SCR1SCR1 522 nt9.79□□□□□ -0.84
CUE4Q04201 MCH5YOR306C 1566 nt9.78□□□□□ -0.84
CUE4Q04201 RRT12YCR045C 1476 nt9.78□□□□□ -0.84
CUE4Q04201 FUN26YAL022C 1554 nt9.77□□□□□ -0.85
CUE4Q04201 SSA1YAL005C 1929 nt9.77□□□□□ -0.85
CUE4Q04201 RRN5YLR141W 1092 nt9.75□□□□□ -0.85
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms