Protein–RNA interactions for Protein: P38907

CHL4, Inner kinetochore subunit CHL4, yeastyeast

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHL4P38907 NSR1YGR159C 1245 nt18.44■□□□□ 0.54
CHL4P38907 YML009W-BYML009W-B 477 nt18.29■□□□□ 0.52
CHL4P38907 NOP1YDL014W 984 nt17.68■□□□□ 0.42
CHL4P38907 MDJ1YFL016C 1536 nt16.64■□□□□ 0.25
CHL4P38907 YKL036CYKL036C 393 nt16.03■□□□□ 0.16
CHL4P38907 SRX1YKL086W 384 nt15.43■□□□□ 0.06
CHL4P38907 Q0297Q0297 156 nt15.37■□□□□ 0.05
CHL4P38907 YJL027CYJL027C 417 nt15.35■□□□□ 0.05
CHL4P38907 YCR051WYCR051W 669 nt14.62□□□□□ -0.07
CHL4P38907 DBP2YNL112W 1641 nt14.6□□□□□ -0.07
CHL4P38907 SCS3YGL126W 1143 nt14.42□□□□□ -0.1
CHL4P38907 YBR190WYBR190W 312 nt14.28□□□□□ -0.12
CHL4P38907 TRN1tP(UGG)A 72 nt14.13□□□□□ -0.15
CHL4P38907 SUF9tP(UGG)F 72 nt14.13□□□□□ -0.15
CHL4P38907 SUF8tP(UGG)H 72 nt14.13□□□□□ -0.15
CHL4P38907 tP(UGG)LtP(UGG)L 72 nt14.13□□□□□ -0.15
CHL4P38907 SUF7tP(UGG)M 72 nt14.13□□□□□ -0.15
CHL4P38907 tP(UGG)N1tP(UGG)N1 72 nt14.13□□□□□ -0.15
CHL4P38907 tP(UGG)N2tP(UGG)N2 72 nt14.13□□□□□ -0.15
CHL4P38907 tP(UGG)O1tP(UGG)O1 72 nt14.13□□□□□ -0.15
CHL4P38907 SUF11tP(UGG)O2 72 nt14.13□□□□□ -0.15
CHL4P38907 CCC1YLR220W 969 nt13.98□□□□□ -0.17
CHL4P38907 RTC3YHR087W 336 nt13.94□□□□□ -0.18
CHL4P38907 YOL085CYOL085C 342 nt13.89□□□□□ -0.19
CHL4P38907 RPP1BYDL130W 321 nt13.79□□□□□ -0.2
CHL4P38907 PKP1YIL042C 1185 nt13.7□□□□□ -0.22
CHL4P38907 RVS167YDR388W 1449 nt13.69□□□□□ -0.22
CHL4P38907 SCJ1YMR214W 1134 nt13.53□□□□□ -0.24
CHL4P38907 tP(UGG)O3tP(UGG)O3 72 nt13.27□□□□□ -0.29
CHL4P38907 PET122YER153C 765 nt13.2□□□□□ -0.3
CHL4P38907 SSA3YBL075C 1950 nt13.2□□□□□ -0.3
CHL4P38907 PUT4YOR348C 1884 nt13.18□□□□□ -0.3
CHL4P38907 SHR5YOL110W 714 nt13.13□□□□□ -0.31
CHL4P38907 SCR1SCR1 522 nt13□□□□□ -0.33
CHL4P38907 URN1YPR152C 1398 nt12.94□□□□□ -0.34
CHL4P38907 DEP1YAL013W 1218 nt12.85□□□□□ -0.35
CHL4P38907 ARE1YCR048W 1833 nt12.85□□□□□ -0.35
CHL4P38907 YDJ1YNL064C 1230 nt12.84□□□□□ -0.35
CHL4P38907 ATS1YAL020C 1002 nt12.82□□□□□ -0.36
CHL4P38907 OPI9YLR338W 858 nt12.82□□□□□ -0.36
CHL4P38907 SAH1YER043C 1350 nt12.81□□□□□ -0.36
CHL4P38907 RRN5YLR141W 1092 nt12.8□□□□□ -0.36
CHL4P38907 POA1YBR022W 534 nt12.75□□□□□ -0.37
CHL4P38907 RPN10YHR200W 807 nt12.7□□□□□ -0.38
CHL4P38907 YHR049C-AYHR049C-A 297 nt12.69□□□□□ -0.38
CHL4P38907 YNL208WYNL208W 600 nt12.63□□□□□ -0.39
CHL4P38907 GAR1YHR089C 618 nt12.6□□□□□ -0.39
CHL4P38907 YER088W-BYER088W-B 147 nt12.54□□□□□ -0.4
CHL4P38907 BSC6YOL137W 1494 nt12.53□□□□□ -0.4
CHL4P38907 PUN1YLR414C 792 nt12.45□□□□□ -0.42
CHL4P38907 RSB1YOR049C 1065 nt12.45□□□□□ -0.42
CHL4P38907 BUD23YCR047C 828 nt12.38□□□□□ -0.43
CHL4P38907 PTC2YER089C 1395 nt12.34□□□□□ -0.43
CHL4P38907 YJR018WYJR018W 363 nt12.33□□□□□ -0.44
CHL4P38907 NAB2YGL122C 1578 nt12.22□□□□□ -0.45
CHL4P38907 TIR1YER011W 765 nt12.2□□□□□ -0.46
CHL4P38907 SPT5YML010W 3192 nt12.13□□□□□ -0.47
CHL4P38907 SSA1YAL005C 1929 nt12.1□□□□□ -0.47
CHL4P38907 YJR120WYJR120W 351 nt12.06□□□□□ -0.48
CHL4P38907 RPP2BYDR382W 333 nt12.01□□□□□ -0.49
CHL4P38907 FIS1YIL065C 468 nt12.01□□□□□ -0.49
CHL4P38907 DAL1YIR027C 1383 nt12.01□□□□□ -0.49
CHL4P38907 FPR4YLR449W 1179 nt11.97□□□□□ -0.49
CHL4P38907 INM2YDR287W 879 nt11.93□□□□□ -0.5
CHL4P38907 PST2YDR032C 597 nt11.92□□□□□ -0.5
CHL4P38907 PHO4YFR034C 939 nt11.89□□□□□ -0.51
CHL4P38907 SSA4YER103W 1929 nt11.88□□□□□ -0.51
CHL4P38907 SRB2YHR041C 633 nt11.83□□□□□ -0.52
CHL4P38907 MEP2YNL142W 1500 nt11.79□□□□□ -0.52
CHL4P38907 YBL100CYBL100C 315 nt11.77□□□□□ -0.53
CHL4P38907 YPS1YLR120C 1710 nt11.76□□□□□ -0.53
CHL4P38907 BDH2YAL061W 1254 nt11.71□□□□□ -0.53
CHL4P38907 YHR165W-AYHR165W-A 312 nt11.66□□□□□ -0.54
CHL4P38907 YDR095CYDR095C 411 nt11.64□□□□□ -0.55
CHL4P38907 FUN26YAL022C 1554 nt11.62□□□□□ -0.55
CHL4P38907 WWM1YFL010C 636 nt11.6□□□□□ -0.55
CHL4P38907 DCW1YKL046C 1350 nt11.59□□□□□ -0.55
CHL4P38907 TRM9YML014W 840 nt11.56□□□□□ -0.56
CHL4P38907 ALF1YNL148C 765 nt11.52□□□□□ -0.57
CHL4P38907 LSM3YLR438C-A 270 nt11.51□□□□□ -0.57
CHL4P38907 SHU1YHL006C 453 nt11.5□□□□□ -0.57
CHL4P38907 BDF1YLR399C 2061 nt11.46□□□□□ -0.57
CHL4P38907 YGR021WYGR021W 873 nt11.45□□□□□ -0.58
CHL4P38907 EMI2YDR516C 1503 nt11.45□□□□□ -0.58
CHL4P38907 CCT6YDR188W 1641 nt11.44□□□□□ -0.58
CHL4P38907 YFL021C-AYFL021C-A 855 nt11.43□□□□□ -0.58
CHL4P38907 RPP2AYOL039W 321 nt11.43□□□□□ -0.58
CHL4P38907 YAL037C-BYAL037C-B 975 nt11.41□□□□□ -0.58
CHL4P38907 YMR090WYMR090W 684 nt11.41□□□□□ -0.58
CHL4P38907 PTP1YDL230W 1008 nt11.4□□□□□ -0.58
CHL4P38907 HOM6YJR139C 1080 nt11.39□□□□□ -0.59
CHL4P38907 SUF2tP(AGG)C 72 nt11.38□□□□□ -0.59
CHL4P38907 SUF10tP(AGG)N 72 nt11.38□□□□□ -0.59
CHL4P38907 CAC2YML102W 1407 nt11.35□□□□□ -0.59
CHL4P38907 SIS1YNL007C 1059 nt11.35□□□□□ -0.59
CHL4P38907 YDL221WYDL221W 552 nt11.34□□□□□ -0.59
CHL4P38907 TAT1YBR069C 1860 nt11.32□□□□□ -0.6
CHL4P38907 YBR220CYBR220C 1683 nt11.32□□□□□ -0.6
CHL4P38907 YKL097CYKL097C 411 nt11.3□□□□□ -0.6
CHL4P38907 MNP1YGL068W 585 nt11.29□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms