Protein–RNA interactions for Protein: Q04301

VBA1, Vacuolar basic amino acid transporter 1, yeastyeast

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA1Q04301 NSR1YGR159C 1245 nt17.32■□□□□ 0.36
VBA1Q04301 YML009W-BYML009W-B 477 nt16.91■□□□□ 0.3
VBA1Q04301 NOP1YDL014W 984 nt16.29■□□□□ 0.2
VBA1Q04301 MDJ1YFL016C 1536 nt15.93■□□□□ 0.14
VBA1Q04301 YKL036CYKL036C 393 nt14.67□□□□□ -0.06
VBA1Q04301 YJL027CYJL027C 417 nt14.63□□□□□ -0.07
VBA1Q04301 SRX1YKL086W 384 nt14.17□□□□□ -0.14
VBA1Q04301 Q0297Q0297 156 nt14.07□□□□□ -0.16
VBA1Q04301 DBP2YNL112W 1641 nt13.88□□□□□ -0.19
VBA1Q04301 YBR190WYBR190W 312 nt13.73□□□□□ -0.21
VBA1Q04301 SSA3YBL075C 1950 nt13.5□□□□□ -0.25
VBA1Q04301 YCR051WYCR051W 669 nt13.45□□□□□ -0.26
VBA1Q04301 RTC3YHR087W 336 nt13.36□□□□□ -0.27
VBA1Q04301 TRN1tP(UGG)A 72 nt13.17□□□□□ -0.3
VBA1Q04301 SUF9tP(UGG)F 72 nt13.17□□□□□ -0.3
VBA1Q04301 SUF8tP(UGG)H 72 nt13.17□□□□□ -0.3
VBA1Q04301 tP(UGG)LtP(UGG)L 72 nt13.17□□□□□ -0.3
VBA1Q04301 SUF7tP(UGG)M 72 nt13.17□□□□□ -0.3
VBA1Q04301 tP(UGG)N1tP(UGG)N1 72 nt13.17□□□□□ -0.3
VBA1Q04301 tP(UGG)N2tP(UGG)N2 72 nt13.17□□□□□ -0.3
VBA1Q04301 tP(UGG)O1tP(UGG)O1 72 nt13.17□□□□□ -0.3
VBA1Q04301 SUF11tP(UGG)O2 72 nt13.17□□□□□ -0.3
VBA1Q04301 SCS3YGL126W 1143 nt13.14□□□□□ -0.31
VBA1Q04301 CCC1YLR220W 969 nt12.98□□□□□ -0.33
VBA1Q04301 PUT4YOR348C 1884 nt12.93□□□□□ -0.34
VBA1Q04301 RVS167YDR388W 1449 nt12.88□□□□□ -0.35
VBA1Q04301 SCJ1YMR214W 1134 nt12.73□□□□□ -0.37
VBA1Q04301 YOL085CYOL085C 342 nt12.67□□□□□ -0.38
VBA1Q04301 RPP1BYDL130W 321 nt12.64□□□□□ -0.39
VBA1Q04301 PKP1YIL042C 1185 nt12.52□□□□□ -0.41
VBA1Q04301 ARE1YCR048W 1833 nt12.51□□□□□ -0.41
VBA1Q04301 POA1YBR022W 534 nt12.44□□□□□ -0.42
VBA1Q04301 YHR049C-AYHR049C-A 297 nt12.35□□□□□ -0.43
VBA1Q04301 SAH1YER043C 1350 nt12.32□□□□□ -0.44
VBA1Q04301 URN1YPR152C 1398 nt12.31□□□□□ -0.44
VBA1Q04301 SHR5YOL110W 714 nt12.31□□□□□ -0.44
VBA1Q04301 BSC6YOL137W 1494 nt12.3□□□□□ -0.44
VBA1Q04301 OPI9YLR338W 858 nt12.27□□□□□ -0.45
VBA1Q04301 tP(UGG)O3tP(UGG)O3 72 nt12.25□□□□□ -0.45
VBA1Q04301 SPT5YML010W 3192 nt12.22□□□□□ -0.45
VBA1Q04301 DEP1YAL013W 1218 nt12.13□□□□□ -0.47
VBA1Q04301 PET122YER153C 765 nt12.09□□□□□ -0.47
VBA1Q04301 SSA4YER103W 1929 nt12.03□□□□□ -0.48
VBA1Q04301 RPN10YHR200W 807 nt11.99□□□□□ -0.49
VBA1Q04301 BUD23YCR047C 828 nt11.98□□□□□ -0.49
VBA1Q04301 SCR1SCR1 522 nt11.97□□□□□ -0.49
VBA1Q04301 PUN1YLR414C 792 nt11.9□□□□□ -0.5
VBA1Q04301 YNL208WYNL208W 600 nt11.89□□□□□ -0.51
VBA1Q04301 YDJ1YNL064C 1230 nt11.87□□□□□ -0.51
VBA1Q04301 PTC2YER089C 1395 nt11.85□□□□□ -0.51
VBA1Q04301 NAB2YGL122C 1578 nt11.78□□□□□ -0.52
VBA1Q04301 YJR018WYJR018W 363 nt11.71□□□□□ -0.53
VBA1Q04301 RRN5YLR141W 1092 nt11.7□□□□□ -0.54
VBA1Q04301 GAR1YHR089C 618 nt11.67□□□□□ -0.54
VBA1Q04301 ATS1YAL020C 1002 nt11.66□□□□□ -0.54
VBA1Q04301 BDF1YLR399C 2061 nt11.65□□□□□ -0.54
VBA1Q04301 MEP2YNL142W 1500 nt11.61□□□□□ -0.55
VBA1Q04301 FIS1YIL065C 468 nt11.59□□□□□ -0.55
VBA1Q04301 DAL1YIR027C 1383 nt11.52□□□□□ -0.57
VBA1Q04301 TAT1YBR069C 1860 nt11.49□□□□□ -0.57
VBA1Q04301 YER088W-BYER088W-B 147 nt11.47□□□□□ -0.57
VBA1Q04301 YJR120WYJR120W 351 nt11.46□□□□□ -0.57
VBA1Q04301 FPR4YLR449W 1179 nt11.44□□□□□ -0.58
VBA1Q04301 RSB1YOR049C 1065 nt11.43□□□□□ -0.58
VBA1Q04301 PHO4YFR034C 939 nt11.42□□□□□ -0.58
VBA1Q04301 DCW1YKL046C 1350 nt11.41□□□□□ -0.58
VBA1Q04301 YPS1YLR120C 1710 nt11.4□□□□□ -0.58
VBA1Q04301 INM2YDR287W 879 nt11.36□□□□□ -0.59
VBA1Q04301 SSA1YAL005C 1929 nt11.31□□□□□ -0.6
VBA1Q04301 RPP2BYDR382W 333 nt11.31□□□□□ -0.6
VBA1Q04301 TIR1YER011W 765 nt11.31□□□□□ -0.6
VBA1Q04301 YHR165W-AYHR165W-A 312 nt11.29□□□□□ -0.6
VBA1Q04301 YBR220CYBR220C 1683 nt11.25□□□□□ -0.61
VBA1Q04301 YDR095CYDR095C 411 nt11.25□□□□□ -0.61
VBA1Q04301 EMI2YDR516C 1503 nt11.25□□□□□ -0.61
VBA1Q04301 YMR090WYMR090W 684 nt11.19□□□□□ -0.62
VBA1Q04301 YBL100CYBL100C 315 nt11.17□□□□□ -0.62
VBA1Q04301 YDL221WYDL221W 552 nt11.12□□□□□ -0.63
VBA1Q04301 PAC11YDR488C 1602 nt11.12□□□□□ -0.63
VBA1Q04301 SDH1YKL148C 1923 nt11.1□□□□□ -0.63
VBA1Q04301 CAC2YML102W 1407 nt11.07□□□□□ -0.64
VBA1Q04301 PTP1YDL230W 1008 nt11.06□□□□□ -0.64
VBA1Q04301 SRB2YHR041C 633 nt11.03□□□□□ -0.64
VBA1Q04301 FUN26YAL022C 1554 nt11.03□□□□□ -0.64
VBA1Q04301 RPP2AYOL039W 321 nt11.02□□□□□ -0.65
VBA1Q04301 BDH2YAL061W 1254 nt11□□□□□ -0.65
VBA1Q04301 PCH2YBR186W 1695 nt10.96□□□□□ -0.65
VBA1Q04301 ALF1YNL148C 765 nt10.96□□□□□ -0.65
VBA1Q04301 SCC4YER147C 1875 nt10.94□□□□□ -0.66
VBA1Q04301 GUT2YIL155C 1950 nt10.93□□□□□ -0.66
VBA1Q04301 SEC11YIR022W 504 nt10.92□□□□□ -0.66
VBA1Q04301 IRC15YPL017C 1500 nt10.91□□□□□ -0.66
VBA1Q04301 TRM9YML014W 840 nt10.87□□□□□ -0.67
VBA1Q04301 SIS1YNL007C 1059 nt10.84□□□□□ -0.67
VBA1Q04301 GIS3YLR094C 1509 nt10.84□□□□□ -0.67
VBA1Q04301 PST2YDR032C 597 nt10.83□□□□□ -0.68
VBA1Q04301 CCT6YDR188W 1641 nt10.83□□□□□ -0.68
VBA1Q04301 PIB2YGL023C 1908 nt10.77□□□□□ -0.69
VBA1Q04301 SUF2tP(AGG)C 72 nt10.75□□□□□ -0.69
VBA1Q04301 SUF10tP(AGG)N 72 nt10.75□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms