RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W DRS1P32892 752 aaKnown RBP4.08□□□□□ -1.76
SPF1YEL031W MTC1P47018 478 aaKnown RBP3.86□□□□□ -1.79
SPF1YEL031W MON2P48563 1636 aaPredicted RBP3.76□□□□□ -1.81
SPF1YEL031W TY1B-DR4Q07793 1604 aa3.75□□□□□ -1.81
SPF1YEL031W TFA1P36100 482 aa3.69□□□□□ -1.82
SPF1YEL031W FAP1P53971 965 aa3.66□□□□□ -1.82
SPF1YEL031W BFR2Q06631 534 aaKnown RBP3.66□□□□□ -1.82
SPF1YEL031W SPA2P23201 1466 aaKnown RBP3.62□□□□□ -1.83
SPF1YEL031W INO80P53115 1489 aa3.57□□□□□ -1.84
SPF1YEL031W SKI3P17883 1432 aaKnown RBP3.54□□□□□ -1.84
SPF1YEL031W TCB3Q03640 1545 aaKnown RBP3.53□□□□□ -1.84
SPF1YEL031W SGS1P35187 1447 aa3.52□□□□□ -1.85
SPF1YEL031W SWR1Q05471 1514 aa3.51□□□□□ -1.85
SPF1YEL031W SSN2P38931 1420 aa3.48□□□□□ -1.85
SPF1YEL031W PRY3P47033 881 aa3.45□□□□□ -1.86
SPF1YEL031W AVT3P36062 692 aa3.45□□□□□ -1.86
SPF1YEL031W NOP2P40991 618 aaKnown RBP3.44□□□□□ -1.86
SPF1YEL031W HSL1P34244 1518 aa3.42□□□□□ -1.86
SPF1YEL031W SIN3P22579 1536 aa3.4□□□□□ -1.87
SPF1YEL031W DIP2Q12220 943 aaPredicted RBP3.39□□□□□ -1.87
SPF1YEL031W SSK2P53599 1579 aa3.37□□□□□ -1.87
SPF1YEL031W THO2P53552 1597 aaKnown RBP3.37□□□□□ -1.87
SPF1YEL031W PEP1P32319 1579 aa3.36□□□□□ -1.87
SPF1YEL031W HIR3P47171 1648 aa3.36□□□□□ -1.87
SPF1YEL031W RQC2Q12532 1038 aaKnown RBP3.35□□□□□ -1.87
SPF1YEL031W KOG1P38873 1557 aa3.35□□□□□ -1.87
SPF1YEL031W CHD1P32657 1468 aa3.34□□□□□ -1.87
SPF1YEL031W ATG2P53855 1592 aa3.34□□□□□ -1.88
SPF1YEL031W DNA2P38859 1522 aa3.3□□□□□ -1.88
SPF1YEL031W TY2B-LR1P0C2J3 1770 aa3.29□□□□□ -1.88
SPF1YEL031W TY2B-FP0CX63 1770 aa3.29□□□□□ -1.88
SPF1YEL031W TY2B-GR2P0CX64 1770 aa3.29□□□□□ -1.88
SPF1YEL031W TY2B-CP25384 1770 aa3.29□□□□□ -1.88
SPF1YEL031W TY2B-DR2Q03494 1770 aa3.29□□□□□ -1.88
SPF1YEL031W TY1B-DR1Q03855 1755 aa3.29□□□□□ -1.88
SPF1YEL031W TY2B-DR3Q07791 1770 aaKnown RBP3.29□□□□□ -1.88
SPF1YEL031W TY2B-OR1Q12113 1770 aa3.29□□□□□ -1.88
SPF1YEL031W TY2B-DR1Q12472 1770 aa3.29□□□□□ -1.88
SPF1YEL031W TY2B-OR2Q12501 1770 aa3.29□□□□□ -1.88
SPF1YEL031W SPT6P23615 1451 aaKnown RBP3.29□□□□□ -1.88
SPF1YEL031W TY1B-BRQ12193 1756 aa3.28□□□□□ -1.88
SPF1YEL031W TY1B-GR3Q12316 1755 aa3.28□□□□□ -1.88
SPF1YEL031W TY1B-ORQ92393 1755 aa3.28□□□□□ -1.88
SPF1YEL031W CAB3P36076 571 aa3.27□□□□□ -1.89
SPF1YEL031W TY1B-DR3Q99231 1755 aa3.27□□□□□ -1.89
SPF1YEL031W MMS22Q06164 1454 aa3.27□□□□□ -1.89
SPF1YEL031W ESP1Q03018 1630 aa3.27□□□□□ -1.89
SPF1YEL031W ENP1P38333 483 aaKnown RBP3.26□□□□□ -1.89
SPF1YEL031W TY1B-HO13535 1793 aa3.26□□□□□ -1.89
SPF1YEL031W TY1B-DR5P0C2I2 1755 aa3.26□□□□□ -1.89
SPF1YEL031W TY1B-DR6P0C2I3 1755 aa3.26□□□□□ -1.89
SPF1YEL031W TY1B-LR2P0C2I5 1755 aa3.26□□□□□ -1.89
SPF1YEL031W TY1B-LR3P0C2I6 1755 aaKnown RBP3.26□□□□□ -1.89
SPF1YEL031W TY1B-PR1P0C2I9 1755 aaKnown RBP3.26□□□□□ -1.89
SPF1YEL031W TY1B-PR2P0C2J0 1756 aa3.26□□□□□ -1.89
SPF1YEL031W TY1B-PR3P0C2J1 1755 aaKnown RBP3.26□□□□□ -1.89
SPF1YEL031W TY1B-JR1P47098 1755 aa3.26□□□□□ -1.89
SPF1YEL031W TY1B-ML2Q03434 1755 aaKnown RBP3.26□□□□□ -1.89
SPF1YEL031W TY1B-ER1Q03612 1755 aa3.26□□□□□ -1.89
SPF1YEL031W TY1B-ML1Q04711 1755 aaKnown RBP3.26□□□□□ -1.89
SPF1YEL031W TY1B-GR2Q12269 1755 aa3.26□□□□□ -1.89
SPF1YEL031W TY1B-OLQ12273 1755 aa3.26□□□□□ -1.89
SPF1YEL031W TY1B-PLQ12414 1755 aaKnown RBP3.26□□□□□ -1.89
SPF1YEL031W TY2B-BQ12491 1770 aa3.25□□□□□ -1.89
SPF1YEL031W NSR1P27476 414 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
SPF1YEL031W SPP41P38904 1435 aa3.25□□□□□ -1.89
SPF1YEL031W SEC3P33332 1336 aaKnown RBP3.24□□□□□ -1.89
SPF1YEL031W XRN1P22147 1528 aaKnown RBP3.24□□□□□ -1.89
SPF1YEL031W UFD4P33202 1483 aa3.22□□□□□ -1.89
SPF1YEL031W EBP2P36049 427 aaKnown RBP3.21□□□□□ -1.89
SPF1YEL031W REV3P14284 1504 aa3.21□□□□□ -1.9
SPF1YEL031W TAF7Q05021 590 aa3.2□□□□□ -1.9
SPF1YEL031W POL5P39985 1022 aaKnown RBP3.2□□□□□ -1.9
SPF1YEL031W YTA7P40340 1379 aa3.2□□□□□ -1.9
SPF1YEL031W MNN4P36044 1178 aa3.19□□□□□ -1.9
SPF1YEL031W RSE1Q04693 1361 aaKnown RBP3.19□□□□□ -1.9
SPF1YEL031W IKI3Q06706 1349 aaKnown RBP3.19□□□□□ -1.9
SPF1YEL031W ISW2Q08773 1120 aa3.19□□□□□ -1.9
SPF1YEL031W TY1B-JR2P47100 1755 aaKnown RBP3.17□□□□□ -1.9
SPF1YEL031W TY1B-ER2Q03619 1755 aa3.17□□□□□ -1.9
SPF1YEL031W TY1B-MR1Q04214 1755 aa3.17□□□□□ -1.9
SPF1YEL031W TY1B-MR2Q04670 1755 aaKnown RBP3.17□□□□□ -1.9
SPF1YEL031W TY1B-LR1Q12088 1755 aaKnown RBP3.17□□□□□ -1.9
SPF1YEL031W TY1B-NL1Q12112 1755 aa3.17□□□□□ -1.9
SPF1YEL031W TY1B-GR1Q12141 1755 aa3.17□□□□□ -1.9
SPF1YEL031W TY1B-BLQ12490 1755 aa3.17□□□□□ -1.9
SPF1YEL031W MDS3P53094 1487 aa3.17□□□□□ -1.9
SPF1YEL031W SMC4Q12267 1418 aa3.17□□□□□ -1.9
SPF1YEL031W STH1P32597 1359 aa3.16□□□□□ -1.9
SPF1YEL031W DMA1P38823 416 aa3.16□□□□□ -1.9
SPF1YEL031W TAF2P23255 1407 aa3.15□□□□□ -1.9
SPF1YEL031W RPA190P10964 1664 aaKnown RBP3.15□□□□□ -1.91
SPF1YEL031W RPG1P38249 964 aaKnown RBP3.15□□□□□ -1.91
SPF1YEL031W MYO2P19524 1574 aaKnown RBP3.15□□□□□ -1.91
SPF1YEL031W STU1P38198 1513 aa3.13□□□□□ -1.91
SPF1YEL031W YPK9Q12697 1472 aa3.13□□□□□ -1.91
SPF1YEL031W TRM732Q03496 1420 aa3.13□□□□□ -1.91
SPF1YEL031W QCR6P00127 147 aa3.13□□□□□ -1.91
SPF1YEL031W BUD4P47136 1447 aa3.12□□□□□ -1.91
SPF1YEL031W ECM5Q03214 1411 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms