Protein–RNA interactions for Protein: Q3E7C1

TFB5, General transcription and DNA repair factor IIH subunit TFB5, yeastyeast

Predicted RBP Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFB5Q3E7C1 NSR1YGR159C 1245 nt17.18■□□□□ 0.34
TFB5Q3E7C1 YML009W-BYML009W-B 477 nt16.76■□□□□ 0.27
TFB5Q3E7C1 NOP1YDL014W 984 nt16.17■□□□□ 0.18
TFB5Q3E7C1 MDJ1YFL016C 1536 nt15.64■□□□□ 0.09
TFB5Q3E7C1 YJL027CYJL027C 417 nt14.45□□□□□ -0.1
TFB5Q3E7C1 YKL036CYKL036C 393 nt14.39□□□□□ -0.11
TFB5Q3E7C1 SRX1YKL086W 384 nt14.09□□□□□ -0.15
TFB5Q3E7C1 Q0297Q0297 156 nt13.97□□□□□ -0.17
TFB5Q3E7C1 DBP2YNL112W 1641 nt13.64□□□□□ -0.23
TFB5Q3E7C1 YBR190WYBR190W 312 nt13.56□□□□□ -0.24
TFB5Q3E7C1 YCR051WYCR051W 669 nt13.28□□□□□ -0.28
TFB5Q3E7C1 RTC3YHR087W 336 nt13.17□□□□□ -0.3
TFB5Q3E7C1 SSA3YBL075C 1950 nt13.09□□□□□ -0.31
TFB5Q3E7C1 TRN1tP(UGG)A 72 nt13.05□□□□□ -0.32
TFB5Q3E7C1 SUF9tP(UGG)F 72 nt13.05□□□□□ -0.32
TFB5Q3E7C1 SUF8tP(UGG)H 72 nt13.05□□□□□ -0.32
TFB5Q3E7C1 tP(UGG)LtP(UGG)L 72 nt13.05□□□□□ -0.32
TFB5Q3E7C1 SUF7tP(UGG)M 72 nt13.05□□□□□ -0.32
TFB5Q3E7C1 tP(UGG)N1tP(UGG)N1 72 nt13.05□□□□□ -0.32
TFB5Q3E7C1 tP(UGG)N2tP(UGG)N2 72 nt13.05□□□□□ -0.32
TFB5Q3E7C1 tP(UGG)O1tP(UGG)O1 72 nt13.05□□□□□ -0.32
TFB5Q3E7C1 SUF11tP(UGG)O2 72 nt13.05□□□□□ -0.32
TFB5Q3E7C1 CCC1YLR220W 969 nt12.83□□□□□ -0.36
TFB5Q3E7C1 RVS167YDR388W 1449 nt12.8□□□□□ -0.36
TFB5Q3E7C1 SCS3YGL126W 1143 nt12.8□□□□□ -0.36
TFB5Q3E7C1 PUT4YOR348C 1884 nt12.67□□□□□ -0.38
TFB5Q3E7C1 SCJ1YMR214W 1134 nt12.54□□□□□ -0.4
TFB5Q3E7C1 RPP1BYDL130W 321 nt12.51□□□□□ -0.41
TFB5Q3E7C1 YOL085CYOL085C 342 nt12.47□□□□□ -0.41
TFB5Q3E7C1 ARE1YCR048W 1833 nt12.27□□□□□ -0.45
TFB5Q3E7C1 PKP1YIL042C 1185 nt12.26□□□□□ -0.45
TFB5Q3E7C1 SHR5YOL110W 714 nt12.21□□□□□ -0.45
TFB5Q3E7C1 POA1YBR022W 534 nt12.19□□□□□ -0.46
TFB5Q3E7C1 tP(UGG)O3tP(UGG)O3 72 nt12.15□□□□□ -0.46
TFB5Q3E7C1 Q0182Q0182 405 nt12.15□□□□□ -0.46
TFB5Q3E7C1 URN1YPR152C 1398 nt12.15□□□□□ -0.46
TFB5Q3E7C1 YHR049C-AYHR049C-A 297 nt12.12□□□□□ -0.47
TFB5Q3E7C1 SAH1YER043C 1350 nt12.11□□□□□ -0.47
TFB5Q3E7C1 OPI9YLR338W 858 nt12.11□□□□□ -0.47
TFB5Q3E7C1 BSC6YOL137W 1494 nt12.06□□□□□ -0.48
TFB5Q3E7C1 PET122YER153C 765 nt11.97□□□□□ -0.49
TFB5Q3E7C1 RPN10YHR200W 807 nt11.93□□□□□ -0.5
TFB5Q3E7C1 DEP1YAL013W 1218 nt11.93□□□□□ -0.5
TFB5Q3E7C1 SPT5YML010W 3192 nt11.89□□□□□ -0.51
TFB5Q3E7C1 YDJ1YNL064C 1230 nt11.81□□□□□ -0.52
TFB5Q3E7C1 YNL208WYNL208W 600 nt11.79□□□□□ -0.52
TFB5Q3E7C1 PUN1YLR414C 792 nt11.78□□□□□ -0.52
TFB5Q3E7C1 BUD23YCR047C 828 nt11.77□□□□□ -0.53
TFB5Q3E7C1 SCR1SCR1 522 nt11.76□□□□□ -0.53
TFB5Q3E7C1 SSA4YER103W 1929 nt11.72□□□□□ -0.53
TFB5Q3E7C1 PTC2YER089C 1395 nt11.67□□□□□ -0.54
TFB5Q3E7C1 NAB2YGL122C 1578 nt11.62□□□□□ -0.55
TFB5Q3E7C1 YJR018WYJR018W 363 nt11.57□□□□□ -0.56
TFB5Q3E7C1 RRN5YLR141W 1092 nt11.57□□□□□ -0.56
TFB5Q3E7C1 GAR1YHR089C 618 nt11.55□□□□□ -0.56
TFB5Q3E7C1 MEP2YNL142W 1500 nt11.4□□□□□ -0.59
TFB5Q3E7C1 FIS1YIL065C 468 nt11.39□□□□□ -0.59
TFB5Q3E7C1 DAL1YIR027C 1383 nt11.38□□□□□ -0.59
TFB5Q3E7C1 MOT3YMR070W 1473 nt11.36□□□□□ -0.59
TFB5Q3E7C1 YER088W-BYER088W-B 147 nt11.35□□□□□ -0.59
TFB5Q3E7C1 BDF1YLR399C 2061 nt11.32□□□□□ -0.6
TFB5Q3E7C1 ATS1YAL020C 1002 nt11.3□□□□□ -0.6
TFB5Q3E7C1 INM2YDR287W 879 nt11.27□□□□□ -0.61
TFB5Q3E7C1 FPR4YLR449W 1179 nt11.26□□□□□ -0.61
TFB5Q3E7C1 PHO4YFR034C 939 nt11.25□□□□□ -0.61
TFB5Q3E7C1 YJR120WYJR120W 351 nt11.25□□□□□ -0.61
TFB5Q3E7C1 RPP2BYDR382W 333 nt11.23□□□□□ -0.61
TFB5Q3E7C1 YPS1YLR120C 1710 nt11.22□□□□□ -0.61
TFB5Q3E7C1 TIR1YER011W 765 nt11.21□□□□□ -0.61
TFB5Q3E7C1 RSB1YOR049C 1065 nt11.18□□□□□ -0.62
TFB5Q3E7C1 TAT1YBR069C 1860 nt11.18□□□□□ -0.62
TFB5Q3E7C1 SSA1YAL005C 1929 nt11.15□□□□□ -0.62
TFB5Q3E7C1 DCW1YKL046C 1350 nt11.15□□□□□ -0.63
TFB5Q3E7C1 YJL225CYJL225C 5277 nt11.14□□□□□ -0.63
TFB5Q3E7C1 YHR165W-AYHR165W-A 312 nt11.12□□□□□ -0.63
TFB5Q3E7C1 YDR095CYDR095C 411 nt11.09□□□□□ -0.63
TFB5Q3E7C1 YMR090WYMR090W 684 nt11.06□□□□□ -0.64
TFB5Q3E7C1 YBL100CYBL100C 315 nt11.04□□□□□ -0.64
TFB5Q3E7C1 EMI2YDR516C 1503 nt11.03□□□□□ -0.64
TFB5Q3E7C1 YBR220CYBR220C 1683 nt11□□□□□ -0.65
TFB5Q3E7C1 YDL221WYDL221W 552 nt10.93□□□□□ -0.66
TFB5Q3E7C1 RDN37-1RDN37-1 5354 nt10.9□□□□□ -0.66
TFB5Q3E7C1 RDN37-2RDN37-2 5354 nt10.9□□□□□ -0.66
TFB5Q3E7C1 BDH2YAL061W 1254 nt10.9□□□□□ -0.66
TFB5Q3E7C1 SDH1YKL148C 1923 nt10.88□□□□□ -0.67
TFB5Q3E7C1 FUN26YAL022C 1554 nt10.88□□□□□ -0.67
TFB5Q3E7C1 RPP2AYOL039W 321 nt10.87□□□□□ -0.67
TFB5Q3E7C1 ALF1YNL148C 765 nt10.86□□□□□ -0.67
TFB5Q3E7C1 PTP1YDL230W 1008 nt10.85□□□□□ -0.67
TFB5Q3E7C1 SRB2YHR041C 633 nt10.82□□□□□ -0.68
TFB5Q3E7C1 CAC2YML102W 1407 nt10.82□□□□□ -0.68
TFB5Q3E7C1 TRM9YML014W 840 nt10.78□□□□□ -0.68
TFB5Q3E7C1 PAC11YDR488C 1602 nt10.76□□□□□ -0.69
TFB5Q3E7C1 SEC11YIR022W 504 nt10.76□□□□□ -0.69
TFB5Q3E7C1 SCC4YER147C 1875 nt10.73□□□□□ -0.69
TFB5Q3E7C1 PCH2YBR186W 1695 nt10.73□□□□□ -0.69
TFB5Q3E7C1 CCT6YDR188W 1641 nt10.72□□□□□ -0.69
TFB5Q3E7C1 SIS1YNL007C 1059 nt10.71□□□□□ -0.69
TFB5Q3E7C1 SUF2tP(AGG)C 72 nt10.7□□□□□ -0.7
TFB5Q3E7C1 SUF10tP(AGG)N 72 nt10.7□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms