RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W YGR067CP53243 804 aa2.29□□□□□ -2.04
VPS41YDR080W NHP10Q03435 203 aa2.29□□□□□ -2.04
VPS41YDR080W SWA2Q06677 668 aa2.29□□□□□ -2.04
VPS41YDR080W YOR365CQ08844 703 aa2.29□□□□□ -2.04
VPS41YDR080W YDR056CQ12025 205 aa2.29□□□□□ -2.04
VPS41YDR080W SFG1Q12507 346 aa2.29□□□□□ -2.04
VPS41YDR080W COR1P07256 457 aa2.29□□□□□ -2.04
VPS41YDR080W POP4P38336 279 aa2.29□□□□□ -2.04
VPS41YDR080W LSM4P40070 187 aaKnown RBP2.29□□□□□ -2.04
VPS41YDR080W IRC6P43615 237 aa2.29□□□□□ -2.04
VPS41YDR080W APS3P47064 194 aa2.29□□□□□ -2.04
VPS41YDR080W BOL2P53082 120 aa2.29□□□□□ -2.04
VPS41YDR080W YNL260CP53846 198 aa2.29□□□□□ -2.04
VPS41YDR080W BOP2Q06150 570 aa2.29□□□□□ -2.04
VPS41YDR080W RRP40Q08285 240 aaKnown RBP2.29□□□□□ -2.04
VPS41YDR080W ESA1Q08649 445 aa2.29□□□□□ -2.04
VPS41YDR080W RUD3Q12234 484 aaKnown RBP2.29□□□□□ -2.04
VPS41YDR080W PFK27Q12471 397 aaPredicted RBP2.29□□□□□ -2.04
VPS41YDR080W RNA1P11745 407 aaKnown RBP2.28□□□□□ -2.04
VPS41YDR080W NSP1P14907 823 aaKnown RBP2.28□□□□□ -2.04
VPS41YDR080W CLB4P24871 460 aa2.28□□□□□ -2.04
VPS41YDR080W YCL049CP25577 312 aa2.28□□□□□ -2.04
VPS41YDR080W HSM3P38348 480 aa2.28□□□□□ -2.04
VPS41YDR080W YHI9P38765 294 aa2.28□□□□□ -2.04
VPS41YDR080W PSD1P39006 500 aa2.28□□□□□ -2.04
VPS41YDR080W SDT1P53078 280 aa2.28□□□□□ -2.04
VPS41YDR080W KTR5P53966 522 aaPredicted RBP2.28□□□□□ -2.04
VPS41YDR080W RPM2Q02773 1202 aa2.28□□□□□ -2.04
VPS41YDR080W YOL019WQ08157 551 aa2.28□□□□□ -2.04
VPS41YDR080W RSA1Q08932 381 aa2.28□□□□□ -2.04
VPS41YDR080W CDC21P06785 304 aa2.28□□□□□ -2.04
VPS41YDR080W ERD1P16151 362 aa2.28□□□□□ -2.04
VPS41YDR080W CKI1P20485 582 aa2.28□□□□□ -2.04
VPS41YDR080W ERG9P29704 444 aa2.28□□□□□ -2.04
VPS41YDR080W SCO2P38072 301 aa2.28□□□□□ -2.04
VPS41YDR080W AVT7P40501 490 aa2.28□□□□□ -2.04
VPS41YDR080W PRM10P42946 383 aa2.28□□□□□ -2.04
VPS41YDR080W SKI8Q02793 397 aaPredicted RBP2.28□□□□□ -2.04
VPS41YDR080W Q0144Q9ZZW2 109 aa2.28□□□□□ -2.04
VPS41YDR080W MET2P08465 486 aa2.28□□□□□ -2.05
VPS41YDR080W SSC1P0CS90 654 aaKnown RBP2.28□□□□□ -2.05
VPS41YDR080W NFU1P32860 256 aa2.28□□□□□ -2.05
VPS41YDR080W TUL1P36096 758 aa2.28□□□□□ -2.05
VPS41YDR080W ROG1P53118 685 aa2.28□□□□□ -2.05
VPS41YDR080W PKP2P53170 491 aa2.28□□□□□ -2.05
VPS41YDR080W CLD1P53264 445 aa2.28□□□□□ -2.05
VPS41YDR080W YLR460CP54007 376 aa2.28□□□□□ -2.05
VPS41YDR080W GAS3Q03655 524 aa2.28□□□□□ -2.05
VPS41YDR080W SWF1Q04629 336 aa2.28□□□□□ -2.05
VPS41YDR080W SMA2Q04658 369 aa2.28□□□□□ -2.05
VPS41YDR080W YLR446WQ06204 433 aa2.28□□□□□ -2.05
VPS41YDR080W YPR172WQ06608 200 aa2.28□□□□□ -2.05
VPS41YDR080W GPN2Q08726 347 aaPredicted RBP2.28□□□□□ -2.05
VPS41YDR080W SWT1Q12104 458 aa2.28□□□□□ -2.05
VPS41YDR080W NMD4Q12129 218 aa2.28□□□□□ -2.05
VPS41YDR080W STE2D6VTK4 431 aa2.27□□□□□ -2.05
VPS41YDR080W STE7P06784 515 aa2.27□□□□□ -2.05
VPS41YDR080W CBP6P07253 162 aaPredicted RBP2.27□□□□□ -2.05
VPS41YDR080W YSF3P0C074 85 aaPredicted RBP2.27□□□□□ -2.05
VPS41YDR080W YFR010W-AP0C5N0 62 aa2.27□□□□□ -2.05
VPS41YDR080W GPA2P10823 449 aa2.27□□□□□ -2.05
VPS41YDR080W GAL3P13045 520 aa2.27□□□□□ -2.05
VPS41YDR080W HSP26P15992 214 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05 RIP-Chip
VPS41YDR080W RPB4P20433 221 aaPredicted RBP2.27□□□□□ -2.05
VPS41YDR080W TRX2P22803 104 aaKnown RBP2.27□□□□□ -2.05
VPS41YDR080W RPI1P23250 407 aaKnown RBP2.27□□□□□ -2.05
VPS41YDR080W CLB2P24869 491 aa2.27□□□□□ -2.05
VPS41YDR080W RAD57P25301 460 aa2.27□□□□□ -2.05
VPS41YDR080W SSE1P32589 693 aaKnown RBP2.27□□□□□ -2.05
VPS41YDR080W BYE1P36106 594 aa2.27□□□□□ -2.05
VPS41YDR080W SEN34P39707 275 aa2.27□□□□□ -2.05
VPS41YDR080W MET18P40469 1032 aa2.27□□□□□ -2.05
VPS41YDR080W UTP25P40498 721 aaKnown RBP2.27□□□□□ -2.05
VPS41YDR080W RPE1P46969 238 aa2.27□□□□□ -2.05
VPS41YDR080W PGU1P47180 361 aa2.27□□□□□ -2.05
VPS41YDR080W MKC7P53379 596 aa2.27□□□□□ -2.05
VPS41YDR080W APC4Q04601 652 aa2.27□□□□□ -2.05
VPS41YDR080W YMR254CQ04838 102 aa2.27□□□□□ -2.05
VPS41YDR080W REX4Q08237 289 aa2.27□□□□□ -2.05
VPS41YDR080W HXK2P04807 486 aaKnown RBP2.27□□□□□ -2.05
VPS41YDR080W SRV2P17555 526 aaKnown RBP2.27□□□□□ -2.05
VPS41YDR080W DAP2P18962 818 aa2.27□□□□□ -2.05
VPS41YDR080W CBF5P33322 483 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
VPS41YDR080W TDA11P38854 504 aa2.27□□□□□ -2.05
VPS41YDR080W SOK1P40317 901 aa2.27□□□□□ -2.05
VPS41YDR080W YIL001WP40560 513 aa2.27□□□□□ -2.05
VPS41YDR080W CTK2P46962 323 aa2.27□□□□□ -2.05
VPS41YDR080W YJR141WP47172 347 aaPredicted RBP2.27□□□□□ -2.05
VPS41YDR080W API2Q04413 109 aa2.27□□□□□ -2.05
VPS41YDR080W YDR278CQ05612 105 aa2.27□□□□□ -2.05
VPS41YDR080W VPS38Q05919 439 aa2.27□□□□□ -2.05
VPS41YDR080W DCR2Q05924 578 aa2.27□□□□□ -2.05
VPS41YDR080W YDL121CQ07541 149 aa2.27□□□□□ -2.05
VPS41YDR080W YCL012CQ8J0M4 134 aa2.27□□□□□ -2.05
VPS41YDR080W SEC16P48415 2195 aaKnown RBP2.27□□□□□ -2.05
VPS41YDR080W ATP2P00830 511 aaKnown RBP2.26□□□□□ -2.05
VPS41YDR080W SEC53P07283 254 aaKnown RBP2.26□□□□□ -2.05
VPS41YDR080W SEC14P24280 304 aaKnown RBP2.26□□□□□ -2.05
VPS41YDR080W SLM5P25345 492 aaKnown RBP2.26□□□□□ -2.05
VPS41YDR080W HIR2P32480 875 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms