Protein–RNA interactions for Protein: P47180

PGU1, Polygalacturonase, yeastyeast

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGU1P47180 YML009W-BYML009W-B 477 nt18.54■□□□□ 0.56
PGU1P47180 NSR1YGR159C 1245 nt18.32■□□□□ 0.52
PGU1P47180 NOP1YDL014W 984 nt18.05■□□□□ 0.48
PGU1P47180 YKL036CYKL036C 393 nt16.75■□□□□ 0.27
PGU1P47180 MDJ1YFL016C 1536 nt16.19■□□□□ 0.18
PGU1P47180 Q0297Q0297 156 nt15.83■□□□□ 0.12
PGU1P47180 SRX1YKL086W 384 nt15.77■□□□□ 0.12
PGU1P47180 YJL027CYJL027C 417 nt15.65■□□□□ 0.1
PGU1P47180 SCS3YGL126W 1143 nt15.29■□□□□ 0.04
PGU1P47180 YCR051WYCR051W 669 nt14.99□□□□□ -0.01
PGU1P47180 YOL085CYOL085C 342 nt14.49□□□□□ -0.09
PGU1P47180 DBP2YNL112W 1641 nt14.35□□□□□ -0.11
PGU1P47180 PKP1YIL042C 1185 nt14.28□□□□□ -0.12
PGU1P47180 RPP1BYDL130W 321 nt14.21□□□□□ -0.13
PGU1P47180 TRN1tP(UGG)A 72 nt14.21□□□□□ -0.13
PGU1P47180 SUF9tP(UGG)F 72 nt14.21□□□□□ -0.13
PGU1P47180 SUF8tP(UGG)H 72 nt14.21□□□□□ -0.13
PGU1P47180 tP(UGG)LtP(UGG)L 72 nt14.21□□□□□ -0.13
PGU1P47180 SUF7tP(UGG)M 72 nt14.21□□□□□ -0.13
PGU1P47180 tP(UGG)N1tP(UGG)N1 72 nt14.21□□□□□ -0.13
PGU1P47180 tP(UGG)N2tP(UGG)N2 72 nt14.21□□□□□ -0.13
PGU1P47180 tP(UGG)O1tP(UGG)O1 72 nt14.21□□□□□ -0.13
PGU1P47180 SUF11tP(UGG)O2 72 nt14.21□□□□□ -0.13
PGU1P47180 CCC1YLR220W 969 nt14.07□□□□□ -0.16
PGU1P47180 YBR190WYBR190W 312 nt13.78□□□□□ -0.2
PGU1P47180 ATS1YAL020C 1002 nt13.69□□□□□ -0.22
PGU1P47180 SCJ1YMR214W 1134 nt13.64□□□□□ -0.23
PGU1P47180 PET122YER153C 765 nt13.57□□□□□ -0.24
PGU1P47180 RVS167YDR388W 1449 nt13.53□□□□□ -0.24
PGU1P47180 RTC3YHR087W 336 nt13.49□□□□□ -0.25
PGU1P47180 tP(UGG)O3tP(UGG)O3 72 nt13.47□□□□□ -0.25
PGU1P47180 SCR1SCR1 522 nt13.45□□□□□ -0.26
PGU1P47180 RRN5YLR141W 1092 nt13.18□□□□□ -0.3
PGU1P47180 SHR5YOL110W 714 nt13.07□□□□□ -0.32
PGU1P47180 YDJ1YNL064C 1230 nt13.03□□□□□ -0.32
PGU1P47180 RSB1YOR049C 1065 nt12.95□□□□□ -0.34
PGU1P47180 YER088W-BYER088W-B 147 nt12.91□□□□□ -0.34
PGU1P47180 GAR1YHR089C 618 nt12.73□□□□□ -0.37
PGU1P47180 DEP1YAL013W 1218 nt12.69□□□□□ -0.38
PGU1P47180 URN1YPR152C 1398 nt12.66□□□□□ -0.38
PGU1P47180 PST2YDR032C 597 nt12.65□□□□□ -0.38
PGU1P47180 RPN10YHR200W 807 nt12.5□□□□□ -0.41
PGU1P47180 YNL208WYNL208W 600 nt12.48□□□□□ -0.41
PGU1P47180 OPI9YLR338W 858 nt12.46□□□□□ -0.41
PGU1P47180 PUT4YOR348C 1884 nt12.42□□□□□ -0.42
PGU1P47180 SAH1YER043C 1350 nt12.35□□□□□ -0.43
PGU1P47180 TIR1YER011W 765 nt12.3□□□□□ -0.44
PGU1P47180 ARE1YCR048W 1833 nt12.24□□□□□ -0.45
PGU1P47180 YKL097CYKL097C 411 nt12.22□□□□□ -0.45
PGU1P47180 SHU1YHL006C 453 nt12.14□□□□□ -0.47
PGU1P47180 SSA1YAL005C 1929 nt12.13□□□□□ -0.47
PGU1P47180 PUN1YLR414C 792 nt12.1□□□□□ -0.47
PGU1P47180 YHR049C-AYHR049C-A 297 nt12.09□□□□□ -0.47
PGU1P47180 YJR018WYJR018W 363 nt12.09□□□□□ -0.47
PGU1P47180 POA1YBR022W 534 nt12.05□□□□□ -0.48
PGU1P47180 SRB2YHR041C 633 nt11.93□□□□□ -0.5
PGU1P47180 YAL037C-BYAL037C-B 975 nt11.93□□□□□ -0.5
PGU1P47180 PTC2YER089C 1395 nt11.92□□□□□ -0.5
PGU1P47180 YJR120WYJR120W 351 nt11.91□□□□□ -0.5
PGU1P47180 RPP2BYDR382W 333 nt11.87□□□□□ -0.51
PGU1P47180 BUD23YCR047C 828 nt11.83□□□□□ -0.52
PGU1P47180 WWM1YFL010C 636 nt11.78□□□□□ -0.52
PGU1P47180 BSC6YOL137W 1494 nt11.77□□□□□ -0.52
PGU1P47180 NAB2YGL122C 1578 nt11.76□□□□□ -0.53
PGU1P47180 YGR021WYGR021W 873 nt11.74□□□□□ -0.53
PGU1P47180 YOR139CYOR139C 393 nt11.71□□□□□ -0.53
PGU1P47180 HOM6YJR139C 1080 nt11.69□□□□□ -0.54
PGU1P47180 MNP1YGL068W 585 nt11.67□□□□□ -0.54
PGU1P47180 BDH2YAL061W 1254 nt11.65□□□□□ -0.54
PGU1P47180 INM2YDR287W 879 nt11.63□□□□□ -0.55
PGU1P47180 DAL1YIR027C 1383 nt11.63□□□□□ -0.55
PGU1P47180 FPR4YLR449W 1179 nt11.61□□□□□ -0.55
PGU1P47180 NPL3YDR432W 1245 nt11.6□□□□□ -0.55
PGU1P47180 FIS1YIL065C 468 nt11.6□□□□□ -0.55
PGU1P47180 YFL021C-AYFL021C-A 855 nt11.58□□□□□ -0.56
PGU1P47180 SSA3YBL075C 1950 nt11.57□□□□□ -0.56
PGU1P47180 YBL100CYBL100C 315 nt11.55□□□□□ -0.56
PGU1P47180 PHO4YFR034C 939 nt11.52□□□□□ -0.57
PGU1P47180 RKM5YLR137W 1104 nt11.52□□□□□ -0.57
PGU1P47180 LSM3YLR438C-A 270 nt11.5□□□□□ -0.57
PGU1P47180 YOL037CYOL037C 354 nt11.5□□□□□ -0.57
PGU1P47180 FUN26YAL022C 1554 nt11.41□□□□□ -0.58
PGU1P47180 TRM9YML014W 840 nt11.41□□□□□ -0.58
PGU1P47180 CCT6YDR188W 1641 nt11.28□□□□□ -0.6
PGU1P47180 tM(CAU)CtM(CAU)C 72 nt11.25□□□□□ -0.61
PGU1P47180 IMT4tM(CAU)E 72 nt11.25□□□□□ -0.61
PGU1P47180 IMT3tM(CAU)J3 72 nt11.25□□□□□ -0.61
PGU1P47180 IMT1tM(CAU)O1 72 nt11.25□□□□□ -0.61
PGU1P47180 IMT2tM(CAU)P 72 nt11.25□□□□□ -0.61
PGU1P47180 YPS1YLR120C 1710 nt11.25□□□□□ -0.61
PGU1P47180 ALF1YNL148C 765 nt11.24□□□□□ -0.61
PGU1P47180 YLR281CYLR281C 468 nt11.21□□□□□ -0.61
PGU1P47180 YDR095CYDR095C 411 nt11.2□□□□□ -0.62
PGU1P47180 SUF2tP(AGG)C 72 nt11.19□□□□□ -0.62
PGU1P47180 SUF10tP(AGG)N 72 nt11.19□□□□□ -0.62
PGU1P47180 WHI5YOR083W 888 nt11.17□□□□□ -0.62
PGU1P47180 PUS2YGL063W 1113 nt11.15□□□□□ -0.62
PGU1P47180 YHR165W-AYHR165W-A 312 nt11.13□□□□□ -0.63
PGU1P47180 SPT5YML010W 3192 nt11.09□□□□□ -0.63
PGU1P47180 YLR154C-GYLR154C-G 150 nt11.09□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms