Protein–RNA interactions for Protein: P53846

YNL260C, Uncharacterized ORAOV1 family protein YNL260C, yeastyeast

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL260CP53846 NSR1YGR159C 1245 nt19.86■□□□□ 0.77
YNL260CP53846 YML009W-BYML009W-B 477 nt19.86■□□□□ 0.77
YNL260CP53846 NOP1YDL014W 984 nt19.36■□□□□ 0.69
YNL260CP53846 YKL036CYKL036C 393 nt17.76■□□□□ 0.43
YNL260CP53846 MDJ1YFL016C 1536 nt17.6■□□□□ 0.41
YNL260CP53846 Q0297Q0297 156 nt16.91■□□□□ 0.3
YNL260CP53846 SRX1YKL086W 384 nt16.89■□□□□ 0.29
YNL260CP53846 YJL027CYJL027C 417 nt16.55■□□□□ 0.24
YNL260CP53846 SCS3YGL126W 1143 nt16.08■□□□□ 0.16
YNL260CP53846 YCR051WYCR051W 669 nt15.97■□□□□ 0.15
YNL260CP53846 DBP2YNL112W 1641 nt15.55■□□□□ 0.08
YNL260CP53846 YOL085CYOL085C 342 nt15.36■□□□□ 0.05
YNL260CP53846 TRN1tP(UGG)A 72 nt15.3■□□□□ 0.04
YNL260CP53846 SUF9tP(UGG)F 72 nt15.3■□□□□ 0.04
YNL260CP53846 SUF8tP(UGG)H 72 nt15.3■□□□□ 0.04
YNL260CP53846 tP(UGG)LtP(UGG)L 72 nt15.3■□□□□ 0.04
YNL260CP53846 SUF7tP(UGG)M 72 nt15.3■□□□□ 0.04
YNL260CP53846 tP(UGG)N1tP(UGG)N1 72 nt15.3■□□□□ 0.04
YNL260CP53846 tP(UGG)N2tP(UGG)N2 72 nt15.3■□□□□ 0.04
YNL260CP53846 tP(UGG)O1tP(UGG)O1 72 nt15.3■□□□□ 0.04
YNL260CP53846 SUF11tP(UGG)O2 72 nt15.3■□□□□ 0.04
YNL260CP53846 RPP1BYDL130W 321 nt15.16■□□□□ 0.02
YNL260CP53846 YBR190WYBR190W 312 nt15.11■□□□□ 0.01
YNL260CP53846 CCC1YLR220W 969 nt15.09■□□□□ 0.01
YNL260CP53846 PKP1YIL042C 1185 nt15.08■□□□□ 0
YNL260CP53846 RTC3YHR087W 336 nt14.73□□□□□ -0.05
YNL260CP53846 RVS167YDR388W 1449 nt14.7□□□□□ -0.06
YNL260CP53846 SCJ1YMR214W 1134 nt14.51□□□□□ -0.09
YNL260CP53846 PET122YER153C 765 nt14.44□□□□□ -0.1
YNL260CP53846 tP(UGG)O3tP(UGG)O3 72 nt14.43□□□□□ -0.1
YNL260CP53846 ATS1YAL020C 1002 nt14.38□□□□□ -0.11
YNL260CP53846 SCR1SCR1 522 nt14.34□□□□□ -0.11
YNL260CP53846 SHR5YOL110W 714 nt14.15□□□□□ -0.14
YNL260CP53846 RRN5YLR141W 1092 nt14.03□□□□□ -0.16
YNL260CP53846 YDJ1YNL064C 1230 nt14.01□□□□□ -0.17
YNL260CP53846 URN1YPR152C 1398 nt13.76□□□□□ -0.21
YNL260CP53846 YER088W-BYER088W-B 147 nt13.76□□□□□ -0.21
YNL260CP53846 RSB1YOR049C 1065 nt13.72□□□□□ -0.21
YNL260CP53846 PUT4YOR348C 1884 nt13.72□□□□□ -0.21
YNL260CP53846 DEP1YAL013W 1218 nt13.69□□□□□ -0.22
YNL260CP53846 GAR1YHR089C 618 nt13.64□□□□□ -0.23
YNL260CP53846 RPN10YHR200W 807 nt13.62□□□□□ -0.23
YNL260CP53846 OPI9YLR338W 858 nt13.61□□□□□ -0.23
YNL260CP53846 YNL208WYNL208W 600 nt13.55□□□□□ -0.24
YNL260CP53846 SAH1YER043C 1350 nt13.48□□□□□ -0.25
YNL260CP53846 ARE1YCR048W 1833 nt13.44□□□□□ -0.26
YNL260CP53846 PST2YDR032C 597 nt13.34□□□□□ -0.27
YNL260CP53846 YHR049C-AYHR049C-A 297 nt13.28□□□□□ -0.28
YNL260CP53846 POA1YBR022W 534 nt13.27□□□□□ -0.29
YNL260CP53846 PUN1YLR414C 792 nt13.24□□□□□ -0.29
YNL260CP53846 TIR1YER011W 765 nt13.21□□□□□ -0.29
YNL260CP53846 YJR018WYJR018W 363 nt13.15□□□□□ -0.3
YNL260CP53846 PTC2YER089C 1395 nt13.03□□□□□ -0.32
YNL260CP53846 SSA1YAL005C 1929 nt13.03□□□□□ -0.32
YNL260CP53846 BSC6YOL137W 1494 nt13.01□□□□□ -0.33
YNL260CP53846 BUD23YCR047C 828 nt12.96□□□□□ -0.33
YNL260CP53846 NAB2YGL122C 1578 nt12.9□□□□□ -0.34
YNL260CP53846 RPP2BYDR382W 333 nt12.9□□□□□ -0.34
YNL260CP53846 SSA3YBL075C 1950 nt12.89□□□□□ -0.35
YNL260CP53846 YJR120WYJR120W 351 nt12.87□□□□□ -0.35
YNL260CP53846 SHU1YHL006C 453 nt12.78□□□□□ -0.36
YNL260CP53846 YKL097CYKL097C 411 nt12.78□□□□□ -0.36
YNL260CP53846 INM2YDR287W 879 nt12.73□□□□□ -0.37
YNL260CP53846 SRB2YHR041C 633 nt12.73□□□□□ -0.37
YNL260CP53846 DAL1YIR027C 1383 nt12.72□□□□□ -0.37
YNL260CP53846 FIS1YIL065C 468 nt12.68□□□□□ -0.38
YNL260CP53846 FPR4YLR449W 1179 nt12.64□□□□□ -0.39
YNL260CP53846 BDH2YAL061W 1254 nt12.61□□□□□ -0.39
YNL260CP53846 YGR021WYGR021W 873 nt12.59□□□□□ -0.39
YNL260CP53846 WWM1YFL010C 636 nt12.58□□□□□ -0.4
YNL260CP53846 PHO4YFR034C 939 nt12.58□□□□□ -0.4
YNL260CP53846 YAL037C-BYAL037C-B 975 nt12.56□□□□□ -0.4
YNL260CP53846 YBL100CYBL100C 315 nt12.55□□□□□ -0.4
YNL260CP53846 HOM6YJR139C 1080 nt12.48□□□□□ -0.41
YNL260CP53846 LSM3YLR438C-A 270 nt12.47□□□□□ -0.41
YNL260CP53846 YFL021C-AYFL021C-A 855 nt12.46□□□□□ -0.41
YNL260CP53846 SPT5YML010W 3192 nt12.42□□□□□ -0.42
YNL260CP53846 FUN26YAL022C 1554 nt12.39□□□□□ -0.43
YNL260CP53846 TRM9YML014W 840 nt12.39□□□□□ -0.43
YNL260CP53846 YPS1YLR120C 1710 nt12.36□□□□□ -0.43
YNL260CP53846 MNP1YGL068W 585 nt12.35□□□□□ -0.43
YNL260CP53846 RKM5YLR137W 1104 nt12.3□□□□□ -0.44
YNL260CP53846 YDR095CYDR095C 411 nt12.28□□□□□ -0.44
YNL260CP53846 CCT6YDR188W 1641 nt12.26□□□□□ -0.45
YNL260CP53846 ALF1YNL148C 765 nt12.26□□□□□ -0.45
YNL260CP53846 MEP2YNL142W 1500 nt12.23□□□□□ -0.45
YNL260CP53846 YOR139CYOR139C 393 nt12.23□□□□□ -0.45
YNL260CP53846 YHR165W-AYHR165W-A 312 nt12.22□□□□□ -0.45
YNL260CP53846 YOL037CYOL037C 354 nt12.22□□□□□ -0.45
YNL260CP53846 NPL3YDR432W 1245 nt12.2□□□□□ -0.46
YNL260CP53846 SUF2tP(AGG)C 72 nt12.2□□□□□ -0.46
YNL260CP53846 SUF10tP(AGG)N 72 nt12.2□□□□□ -0.46
YNL260CP53846 SIS1YNL007C 1059 nt12.06□□□□□ -0.48
YNL260CP53846 RPP2AYOL039W 321 nt12.06□□□□□ -0.48
YNL260CP53846 SSA4YER103W 1929 nt11.99□□□□□ -0.49
YNL260CP53846 DCW1YKL046C 1350 nt11.99□□□□□ -0.49
YNL260CP53846 PTP1YDL230W 1008 nt11.97□□□□□ -0.49
YNL260CP53846 YLR281CYLR281C 468 nt11.9□□□□□ -0.5
YNL260CP53846 YLR154C-GYLR154C-G 150 nt11.89□□□□□ -0.51
YNL260CP53846 EMI2YDR516C 1503 nt11.89□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms