RNA–Protein interactions for RNA: YMR198W

CIK1, Transcript of Kinesin-associated protein, yeastyeast

Gene CIK1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIK1YMR198W AQR1P53943 586 aa3.05□□□□□ -1.92
CIK1YMR198W ELP3Q02908 557 aaKnown RBP3.05□□□□□ -1.92
CIK1YMR198W ABZ2Q03266 374 aa3.05□□□□□ -1.92
CIK1YMR198W YDR239CQ03780 787 aa3.05□□□□□ -1.92
CIK1YMR198W MSC3Q05812 728 aa3.05□□□□□ -1.92
CIK1YMR198W YLR413WQ06689 675 aa3.05□□□□□ -1.92
CIK1YMR198W YDR061WQ12298 539 aa3.05□□□□□ -1.92
CIK1YMR198W TFB5Q3E7C1 72 aaPredicted RBP3.05□□□□□ -1.92
CIK1YMR198W NBL1Q3E7Y6 73 aa3.05□□□□□ -1.92
CIK1YMR198W HXT1P32465 570 aa3.05□□□□□ -1.92
CIK1YMR198W EFB1P32471 206 aaKnown RBP3.05□□□□□ -1.92
CIK1YMR198W DOA4P32571 926 aa3.05□□□□□ -1.92
CIK1YMR198W SHP1P34223 423 aa3.05□□□□□ -1.92
CIK1YMR198W SWD3P38123 315 aa3.05□□□□□ -1.92
CIK1YMR198W BNA4P38169 460 aa3.05□□□□□ -1.92
CIK1YMR198W PEX32P38292 413 aa3.05□□□□□ -1.92
CIK1YMR198W AFG3P39925 761 aa3.05□□□□□ -1.92
CIK1YMR198W SGN1P40561 250 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
CIK1YMR198W INA22P40576 216 aa3.05□□□□□ -1.92
CIK1YMR198W RRT5P43607 289 aa3.05□□□□□ -1.92
CIK1YMR198W IPI3P53877 555 aa3.05□□□□□ -1.92
CIK1YMR198W RHO5P53879 331 aaKnown RBP3.05□□□□□ -1.92
CIK1YMR198W VPS38Q05919 439 aa3.05□□□□□ -1.92
CIK1YMR198W SMD2Q06217 110 aaKnown RBP3.05□□□□□ -1.92
CIK1YMR198W UAF30Q08747 228 aa3.05□□□□□ -1.92
CIK1YMR198W TY3A-GQ12173 290 aa3.05□□□□□ -1.92
CIK1YMR198W TY3A-IQ99219 290 aa3.05□□□□□ -1.92
CIK1YMR198W SUP35P05453 685 aaKnown RBP3.04□□□□□ -1.92
CIK1YMR198W GCD2P12754 651 aaPredicted RBP3.04□□□□□ -1.92
CIK1YMR198W SPS22P25380 463 aa3.04□□□□□ -1.92
CIK1YMR198W CRM1P30822 1084 aaKnown RBP3.04□□□□□ -1.92
CIK1YMR198W AFG1P32317 509 aa3.04□□□□□ -1.92
CIK1YMR198W SPR1P32603 445 aa3.04□□□□□ -1.92
CIK1YMR198W PMT1P33775 817 aa3.04□□□□□ -1.92
CIK1YMR198W SLM4P38247 162 aa3.04□□□□□ -1.92
CIK1YMR198W GCN20P43535 752 aaKnown RBP3.04□□□□□ -1.92
CIK1YMR198W TIS11P47977 285 aa3.04□□□□□ -1.92
CIK1YMR198W TWF1P53250 332 aa3.04□□□□□ -1.92
CIK1YMR198W HEF3P53978 1044 aaKnown RBP3.04□□□□□ -1.92
CIK1YMR198W PIR3Q03180 325 aa3.04□□□□□ -1.92
CIK1YMR198W VTA1Q06263 330 aa3.04□□□□□ -1.92
CIK1YMR198W MHR1Q06630 226 aa3.04□□□□□ -1.92
CIK1YMR198W MRPL35Q06678 367 aa3.04□□□□□ -1.92
CIK1YMR198W TSR1Q07381 788 aaKnown RBP3.04□□□□□ -1.92
CIK1YMR198W AVL9Q12500 764 aa3.04□□□□□ -1.92
CIK1YMR198W YLR278CQ05854 1341 aa3.03□□□□□ -1.92
CIK1YMR198W MES1P00958 751 aaKnown RBP3.03□□□□□ -1.92
CIK1YMR198W CBP2P03874 630 aaPredicted RBP3.03□□□□□ -1.92
CIK1YMR198W GAL80P04387 435 aa3.03□□□□□ -1.92
CIK1YMR198W RPL3P14126 387 aaKnown RBP3.03□□□□□ -1.92
CIK1YMR198W HEM15P16622 393 aa3.03□□□□□ -1.92
CIK1YMR198W DEG1P31115 442 aaKnown RBP3.03□□□□□ -1.92
CIK1YMR198W YME2P32843 850 aa3.03□□□□□ -1.92
CIK1YMR198W YBL059WP34224 193 aa3.03□□□□□ -1.92
CIK1YMR198W THI2P38141 450 aa3.03□□□□□ -1.92
CIK1YMR198W KEL1P38853 1164 aaKnown RBP3.03□□□□□ -1.92
CIK1YMR198W HXT14P42833 540 aa3.03□□□□□ -1.92
CIK1YMR198W PET130P47065 347 aa3.03□□□□□ -1.92
CIK1YMR198W IMD4P50094 524 aaKnown RBP3.03□□□□□ -1.92
CIK1YMR198W VID30P53076 958 aa3.03□□□□□ -1.92
CIK1YMR198W HOP2P53187 214 aa3.03□□□□□ -1.92
CIK1YMR198W CGR1P53188 120 aa3.03□□□□□ -1.92
CIK1YMR198W YNL143CP53908 130 aa3.03□□□□□ -1.92
CIK1YMR198W RPN9Q04062 393 aaKnown RBP3.03□□□□□ -1.92
CIK1YMR198W VPS20Q04272 221 aa3.03□□□□□ -1.92
CIK1YMR198W MRPL23Q12487 163 aaPredicted RBP3.03□□□□□ -1.92
CIK1YMR198W RAD61Q99359 647 aa3.03□□□□□ -1.92
CIK1YMR198W EXO70P19658 623 aa3.02□□□□□ -1.93
CIK1YMR198W SNT1P25357 1226 aa3.02□□□□□ -1.93
CIK1YMR198W RPL5P26321 297 aaKnown RBP3.02□□□□□ -1.93
CIK1YMR198W MRE11P32829 692 aa3.02□□□□□ -1.93
CIK1YMR198W SEC66P33754 206 aa3.02□□□□□ -1.93
CIK1YMR198W HCS1P34243 683 aa3.02□□□□□ -1.93
CIK1YMR198W MMS4P38257 691 aa3.02□□□□□ -1.93
CIK1YMR198W NTC20P38302 140 aaPredicted RBP3.02□□□□□ -1.93
CIK1YMR198W RFC3P38629 340 aa3.02□□□□□ -1.93
CIK1YMR198W NDT80P38830 627 aa3.02□□□□□ -1.93
CIK1YMR198W LIN1P38852 340 aaPredicted RBP3.02□□□□□ -1.93
CIK1YMR198W MNN9P39107 395 aaKnown RBP3.02□□□□□ -1.93
CIK1YMR198W ELP2P42935 788 aa3.02□□□□□ -1.93
CIK1YMR198W YFR018CP43599 363 aa3.02□□□□□ -1.93
CIK1YMR198W RRP46P53256 223 aaPredicted RBP3.02□□□□□ -1.93
CIK1YMR198W SNZ1Q03148 297 aa3.02□□□□□ -1.93
CIK1YMR198W PBA1Q05778 276 aa3.02□□□□□ -1.93
CIK1YMR198W ARR1Q06596 294 aa3.02□□□□□ -1.93
CIK1YMR198W RBD2Q12270 262 aa3.02□□□□□ -1.93
CIK1YMR198W YML133CQ03099 1374 aa3.02□□□□□ -1.93
CIK1YMR198W YLL067CQ07888 1374 aa3.02□□□□□ -1.93
CIK1YMR198W YLL066CQ99208 1374 aa3.02□□□□□ -1.93
CIK1YMR198W SOD1P00445 154 aaKnown RBP3.02□□□□□ -1.93
CIK1YMR198W UNG1P12887 359 aa3.02□□□□□ -1.93
CIK1YMR198W CLN3P13365 580 aa3.02□□□□□ -1.93
CIK1YMR198W MSS116P15424 664 aaKnown RBP3.02□□□□□ -1.93
CIK1YMR198W PRP2P20095 876 aaPredicted RBP3.02□□□□□ -1.93
CIK1YMR198W PRD1P25375 712 aa3.02□□□□□ -1.93
CIK1YMR198W KRE6P32486 720 aa3.02□□□□□ -1.93
CIK1YMR198W COT1P32798 439 aa3.02□□□□□ -1.93
CIK1YMR198W RRP1P35178 278 aaPredicted RBP3.02□□□□□ -1.93
CIK1YMR198W TPO5P36029 618 aa3.02□□□□□ -1.93
CIK1YMR198W MRPL37P36532 105 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms