RNA–Protein interactions for RNA: YMR198W

CIK1, Transcript of Kinesin-associated protein, yeastyeast

Gene CIK1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIK1YMR198W MTC1P47018 478 aaKnown RBP14.84□□□□□ -0.03
CIK1YMR198W DRS1P32892 752 aaKnown RBP14.12□□□□□ -0.15
CIK1YMR198W FAP1P53971 965 aa12.97□□□□□ -0.33
CIK1YMR198W PRI1P10363 409 aa12.35□□□□□ -0.43
CIK1YMR198W DIP2Q12220 943 aaPredicted RBP12.28□□□□□ -0.44
CIK1YMR198W PRY3P47033 881 aa12.2□□□□□ -0.46
CIK1YMR198W AAD16Q02895 342 aa12.2□□□□□ -0.46
CIK1YMR198W ISW2Q08773 1120 aa12.18□□□□□ -0.46
CIK1YMR198W RPG1P38249 964 aaKnown RBP12.07□□□□□ -0.48
CIK1YMR198W AVT3P36062 692 aa11.97□□□□□ -0.49
CIK1YMR198W BFR2Q06631 534 aaKnown RBP11.86□□□□□ -0.51
CIK1YMR198W RSE1Q04693 1361 aaKnown RBP11.76□□□□□ -0.53
CIK1YMR198W TSR3Q12094 313 aaKnown RBP11.68□□□□□ -0.54
CIK1YMR198W YCK3P39962 524 aa11.67□□□□□ -0.54
CIK1YMR198W HAA1Q12753 694 aaKnown RBP11.43□□□□□ -0.58
CIK1YMR198W RPL17AP05740 184 aaKnown RBP11.39□□□□□ -0.59
CIK1YMR198W RPL17BP46990 184 aaKnown RBP11.39□□□□□ -0.59
CIK1YMR198W REB1P21538 810 aa11.28□□□□□ -0.6
CIK1YMR198W MRPL32P25348 183 aa11.16□□□□□ -0.62
CIK1YMR198W SPT21P35209 758 aa11□□□□□ -0.65
CIK1YMR198W YKR023WP36119 530 aaKnown RBP10.8□□□□□ -0.68
CIK1YMR198W CDC27P38042 758 aa10.76□□□□□ -0.69
CIK1YMR198W TFA1P36100 482 aa10.67□□□□□ -0.7
CIK1YMR198W RIM101P33400 625 aa10.64□□□□□ -0.71
CIK1YMR198W YGL015CP33199 130 aa10.62□□□□□ -0.71
CIK1YMR198W TFC8Q12308 588 aa10.56□□□□□ -0.72
CIK1YMR198W HOP09932 586 aa10.55□□□□□ -0.72
CIK1YMR198W DCD1P06773 312 aa10.53□□□□□ -0.72
CIK1YMR198W MAP2P38174 421 aaKnown RBP10.37□□□□□ -0.75
CIK1YMR198W UBP10P53874 792 aaPredicted RBP10.35□□□□□ -0.75
CIK1YMR198W OXP1P28273 1286 aa10.31□□□□□ -0.76
CIK1YMR198W BCH2P36122 765 aa10.22□□□□□ -0.77
CIK1YMR198W SCY1P53009 804 aa10.19□□□□□ -0.78
CIK1YMR198W PTP3P40048 928 aa10.06□□□□□ -0.8
CIK1YMR198W YIL055CP40523 627 aaKnown RBP10.05□□□□□ -0.8
CIK1YMR198W SLX5P32828 619 aaKnown RBP10.01□□□□□ -0.81
CIK1YMR198W YAH1Q12184 172 aaKnown RBP10□□□□□ -0.81
CIK1YMR198W EPS1P40557 701 aa9.98□□□□□ -0.81
CIK1YMR198W RSM7P47150 247 aa9.95□□□□□ -0.82
CIK1YMR198W BDF1P35817 686 aa9.94□□□□□ -0.82
CIK1YMR198W YLR271WQ06152 274 aa9.89□□□□□ -0.83
CIK1YMR198W TIF4632P39936 914 aaKnown RBP9.87□□□□□ -0.83
CIK1YMR198W AI2P03876 854 aa9.86□□□□□ -0.83
CIK1YMR198W TGL3P40308 642 aa9.86□□□□□ -0.83
CIK1YMR198W SSP1P38871 571 aa9.79□□□□□ -0.84
CIK1YMR198W BBC1P47068 1157 aa9.78□□□□□ -0.84
CIK1YMR198W PSD2P53037 1138 aaKnown RBP9.72□□□□□ -0.85
CIK1YMR198W BUD31P25337 157 aaPredicted RBP9.65□□□□□ -0.86
CIK1YMR198W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.65□□□□□ -0.86not detected
CIK1YMR198W CST9Q06032 482 aa9.58□□□□□ -0.88
CIK1YMR198W NSR1P27476 414 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88not detected
CIK1YMR198W MST1P07236 462 aa9.52□□□□□ -0.88
CIK1YMR198W MGA2P40578 1113 aa9.52□□□□□ -0.88
CIK1YMR198W MRM1P25270 412 aa9.52□□□□□ -0.89
CIK1YMR198W YOR238WQ08634 303 aa9.46□□□□□ -0.9
CIK1YMR198W YAP5P40574 245 aa9.45□□□□□ -0.9
CIK1YMR198W UBP9P39967 754 aa9.4□□□□□ -0.9
CIK1YMR198W RCR1P38212 213 aa9.35□□□□□ -0.91
CIK1YMR198W VPS29P38759 282 aa9.33□□□□□ -0.92
CIK1YMR198W YBL029C-AQ3E756 94 aa9.32□□□□□ -0.92
CIK1YMR198W PIB1Q06651 286 aa9.31□□□□□ -0.92
CIK1YMR198W RTG3P38165 486 aa9.3□□□□□ -0.92
CIK1YMR198W YMR1P47147 688 aaKnown RBP RIP-Chip data9.25□□□□□ -0.93not detected
CIK1YMR198W STS1P38637 319 aa9.24□□□□□ -0.93
CIK1YMR198W VNX1P42839 908 aa9.22□□□□□ -0.93
CIK1YMR198W DBP1P24784 617 aaKnown RBP9.22□□□□□ -0.93
CIK1YMR198W YFR006WP43590 535 aa9.2□□□□□ -0.94
CIK1YMR198W WSC3Q12215 556 aa9.19□□□□□ -0.94
CIK1YMR198W GTT3P39996 337 aa9.18□□□□□ -0.94
CIK1YMR198W SIS1P25294 352 aaKnown RBP9.16□□□□□ -0.94
CIK1YMR198W VMA1P17255 1071 aaKnown RBP9.11□□□□□ -0.95
CIK1YMR198W RAM2P29703 316 aa9.11□□□□□ -0.95
CIK1YMR198W SPP1Q03012 353 aa9.11□□□□□ -0.95
CIK1YMR198W TIF11P38912 153 aaKnown RBP9.07□□□□□ -0.96
CIK1YMR198W YOL036WQ08206 761 aa9.05□□□□□ -0.96
CIK1YMR198W SAM3Q08986 587 aa9.04□□□□□ -0.96
CIK1YMR198W SET4P42948 560 aa9.01□□□□□ -0.97
CIK1YMR198W MSB4Q12317 492 aa9.01□□□□□ -0.97
CIK1YMR198W MAK11P20484 414 aaKnown RBP9□□□□□ -0.97
CIK1YMR198W IOC2Q12072 812 aa8.99□□□□□ -0.97
CIK1YMR198W ULI1P43604 169 aa8.98□□□□□ -0.97
CIK1YMR198W LDB19Q12502 818 aa8.94□□□□□ -0.98
CIK1YMR198W EDS1P38073 919 aa8.93□□□□□ -0.98
CIK1YMR198W FKH1P40466 484 aa8.93□□□□□ -0.98
CIK1YMR198W TRP5P00931 707 aaKnown RBP8.91□□□□□ -0.98
CIK1YMR198W EAP1P36041 632 aaKnown RBP8.91□□□□□ -0.98
CIK1YMR198W AIR2Q12476 344 aaKnown RBP8.91□□□□□ -0.98
CIK1YMR198W MIF2P35201 549 aa8.89□□□□□ -0.99
CIK1YMR198W GYP5Q12344 894 aa8.89□□□□□ -0.99
CIK1YMR198W COQ8P27697 501 aa8.88□□□□□ -0.99
CIK1YMR198W PTC3P34221 468 aaKnown RBP8.84□□□□□ -0.99
CIK1YMR198W ABP1P15891 592 aaKnown RBP8.82□□□□□ -1
CIK1YMR198W DCW1P36091 449 aa8.82□□□□□ -1
CIK1YMR198W RTG1P32607 177 aa8.81□□□□□ -1
CIK1YMR198W GRE2Q12068 342 aaKnown RBP8.81□□□□□ -1
CIK1YMR198W HTA1P04911 132 aaKnown RBP8.78□□□□□ -1
CIK1YMR198W HTA2P04912 132 aa8.78□□□□□ -1
CIK1YMR198W DAN4P47179 1161 aa8.78□□□□□ -1
CIK1YMR198W YNL035CP53962 389 aaKnown RBP8.78□□□□□ -1
CIK1YMR198W YEL023CP39992 682 aa8.75□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 181.3 ms