Protein–RNA interactions for Protein: P00445

SOD1, Superoxide dismutase [Cu-Zn], yeastyeast

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SOD1P00445 NSR1YGR159C 1245 nt16.36■□□□□ 0.21
SOD1P00445 YML009W-BYML009W-B 477 nt16.31■□□□□ 0.2
SOD1P00445 NOP1YDL014W 984 nt15.74■□□□□ 0.11
SOD1P00445 MDJ1YFL016C 1536 nt14.76□□□□□ -0.05
SOD1P00445 YKL036CYKL036C 393 nt14.36□□□□□ -0.11
SOD1P00445 SRX1YKL086W 384 nt13.77□□□□□ -0.21
SOD1P00445 Q0297Q0297 156 nt13.73□□□□□ -0.21
SOD1P00445 YJL027CYJL027C 417 nt13.57□□□□□ -0.24
SOD1P00445 YCR051WYCR051W 669 nt13.06□□□□□ -0.32
SOD1P00445 SCS3YGL126W 1143 nt12.98□□□□□ -0.33
SOD1P00445 DBP2YNL112W 1641 nt12.97□□□□□ -0.33
SOD1P00445 YBR190WYBR190W 312 nt12.6□□□□□ -0.39
SOD1P00445 TRN1tP(UGG)A 72 nt12.58□□□□□ -0.4
SOD1P00445 SUF9tP(UGG)F 72 nt12.58□□□□□ -0.4
SOD1P00445 SUF8tP(UGG)H 72 nt12.58□□□□□ -0.4
SOD1P00445 tP(UGG)LtP(UGG)L 72 nt12.58□□□□□ -0.4
SOD1P00445 SUF7tP(UGG)M 72 nt12.58□□□□□ -0.4
SOD1P00445 tP(UGG)N1tP(UGG)N1 72 nt12.58□□□□□ -0.4
SOD1P00445 tP(UGG)N2tP(UGG)N2 72 nt12.58□□□□□ -0.4
SOD1P00445 tP(UGG)O1tP(UGG)O1 72 nt12.58□□□□□ -0.4
SOD1P00445 SUF11tP(UGG)O2 72 nt12.58□□□□□ -0.4
SOD1P00445 CCC1YLR220W 969 nt12.46□□□□□ -0.41
SOD1P00445 YOL085CYOL085C 342 nt12.46□□□□□ -0.41
SOD1P00445 RPP1BYDL130W 321 nt12.32□□□□□ -0.44
SOD1P00445 RTC3YHR087W 336 nt12.32□□□□□ -0.44
SOD1P00445 PKP1YIL042C 1185 nt12.31□□□□□ -0.44
SOD1P00445 SSA3YBL075C 1950 nt12.29□□□□□ -0.44
SOD1P00445 RVS167YDR388W 1449 nt12.11□□□□□ -0.47
SOD1P00445 SCJ1YMR214W 1134 nt12.07□□□□□ -0.48
SOD1P00445 tP(UGG)O3tP(UGG)O3 72 nt11.83□□□□□ -0.52
SOD1P00445 PET122YER153C 765 nt11.82□□□□□ -0.52
SOD1P00445 PUT4YOR348C 1884 nt11.66□□□□□ -0.54
SOD1P00445 SHR5YOL110W 714 nt11.65□□□□□ -0.54
SOD1P00445 SCR1SCR1 522 nt11.6□□□□□ -0.55
SOD1P00445 ATS1YAL020C 1002 nt11.54□□□□□ -0.56
SOD1P00445 URN1YPR152C 1398 nt11.47□□□□□ -0.57
SOD1P00445 RRN5YLR141W 1092 nt11.45□□□□□ -0.58
SOD1P00445 YDJ1YNL064C 1230 nt11.43□□□□□ -0.58
SOD1P00445 DEP1YAL013W 1218 nt11.42□□□□□ -0.58
SOD1P00445 ARE1YCR048W 1833 nt11.35□□□□□ -0.59
SOD1P00445 SAH1YER043C 1350 nt11.33□□□□□ -0.6
SOD1P00445 OPI9YLR338W 858 nt11.33□□□□□ -0.6
SOD1P00445 POA1YBR022W 534 nt11.24□□□□□ -0.61
SOD1P00445 GAR1YHR089C 618 nt11.23□□□□□ -0.61
SOD1P00445 YER088W-BYER088W-B 147 nt11.22□□□□□ -0.61
SOD1P00445 RPN10YHR200W 807 nt11.22□□□□□ -0.61
SOD1P00445 YHR049C-AYHR049C-A 297 nt11.2□□□□□ -0.62
SOD1P00445 YNL208WYNL208W 600 nt11.19□□□□□ -0.62
SOD1P00445 RSB1YOR049C 1065 nt11.15□□□□□ -0.62
SOD1P00445 BSC6YOL137W 1494 nt11.11□□□□□ -0.63
SOD1P00445 SPT5YML010W 3192 nt11.05□□□□□ -0.64
SOD1P00445 PUN1YLR414C 792 nt10.99□□□□□ -0.65
SOD1P00445 BUD23YCR047C 828 nt10.93□□□□□ -0.66
SOD1P00445 SSA4YER103W 1929 nt10.92□□□□□ -0.66
SOD1P00445 YJR018WYJR018W 363 nt10.92□□□□□ -0.66
SOD1P00445 PTC2YER089C 1395 nt10.91□□□□□ -0.66
SOD1P00445 TIR1YER011W 765 nt10.86□□□□□ -0.67
SOD1P00445 SSA1YAL005C 1929 nt10.79□□□□□ -0.68
SOD1P00445 NAB2YGL122C 1578 nt10.77□□□□□ -0.68
SOD1P00445 YJR120WYJR120W 351 nt10.75□□□□□ -0.69
SOD1P00445 PST2YDR032C 597 nt10.73□□□□□ -0.69
SOD1P00445 FIS1YIL065C 468 nt10.64□□□□□ -0.71
SOD1P00445 RPP2BYDR382W 333 nt10.62□□□□□ -0.71
SOD1P00445 SRB2YHR041C 633 nt10.61□□□□□ -0.71
SOD1P00445 DAL1YIR027C 1383 nt10.61□□□□□ -0.71
SOD1P00445 FPR4YLR449W 1179 nt10.59□□□□□ -0.71
SOD1P00445 BDF1YLR399C 2061 nt10.56□□□□□ -0.72
SOD1P00445 INM2YDR287W 879 nt10.53□□□□□ -0.72
SOD1P00445 PHO4YFR034C 939 nt10.52□□□□□ -0.73
SOD1P00445 MEP2YNL142W 1500 nt10.49□□□□□ -0.73
SOD1P00445 TAT1YBR069C 1860 nt10.42□□□□□ -0.74
SOD1P00445 YBL100CYBL100C 315 nt10.42□□□□□ -0.74
SOD1P00445 BDH2YAL061W 1254 nt10.39□□□□□ -0.75
SOD1P00445 YPS1YLR120C 1710 nt10.38□□□□□ -0.75
SOD1P00445 WWM1YFL010C 636 nt10.37□□□□□ -0.75
SOD1P00445 SHU1YHL006C 453 nt10.35□□□□□ -0.75
SOD1P00445 DCW1YKL046C 1350 nt10.3□□□□□ -0.76
SOD1P00445 FUN26YAL022C 1554 nt10.3□□□□□ -0.76
SOD1P00445 YDR095CYDR095C 411 nt10.28□□□□□ -0.76
SOD1P00445 YHR165W-AYHR165W-A 312 nt10.28□□□□□ -0.76
SOD1P00445 YAL037C-BYAL037C-B 975 nt10.28□□□□□ -0.76
SOD1P00445 TRM9YML014W 840 nt10.23□□□□□ -0.77
SOD1P00445 YGR021WYGR021W 873 nt10.21□□□□□ -0.77
SOD1P00445 LSM3YLR438C-A 270 nt10.21□□□□□ -0.77
SOD1P00445 YKL097CYKL097C 411 nt10.19□□□□□ -0.78
SOD1P00445 HOM6YJR139C 1080 nt10.18□□□□□ -0.78
SOD1P00445 ALF1YNL148C 765 nt10.18□□□□□ -0.78
SOD1P00445 YFL021C-AYFL021C-A 855 nt10.17□□□□□ -0.78
SOD1P00445 YBR220CYBR220C 1683 nt10.17□□□□□ -0.78
SOD1P00445 EMI2YDR516C 1503 nt10.16□□□□□ -0.78
SOD1P00445 PAC11YDR488C 1602 nt10.15□□□□□ -0.78
SOD1P00445 YMR090WYMR090W 684 nt10.14□□□□□ -0.79
SOD1P00445 CCT6YDR188W 1641 nt10.14□□□□□ -0.79
SOD1P00445 MNP1YGL068W 585 nt10.13□□□□□ -0.79
SOD1P00445 PTP1YDL230W 1008 nt10.09□□□□□ -0.79
SOD1P00445 RPP2AYOL039W 321 nt10.09□□□□□ -0.79
SOD1P00445 SUF2tP(AGG)C 72 nt10.05□□□□□ -0.8
SOD1P00445 SUF10tP(AGG)N 72 nt10.05□□□□□ -0.8
SOD1P00445 CAC2YML102W 1407 nt10.05□□□□□ -0.8
SOD1P00445 YDL221WYDL221W 552 nt10.04□□□□□ -0.8
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms