Protein–RNA interactions for Protein: P32571

DOA4, Ubiquitin carboxyl-terminal hydrolase 4, yeastyeast

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DOA4P32571 NSR1YGR159C 1245 nt18.01■□□□□ 0.47
DOA4P32571 YML009W-BYML009W-B 477 nt17.8■□□□□ 0.44
DOA4P32571 NOP1YDL014W 984 nt17.16■□□□□ 0.34
DOA4P32571 MDJ1YFL016C 1536 nt16.36■□□□□ 0.21
DOA4P32571 YKL036CYKL036C 393 nt15.44■□□□□ 0.06
DOA4P32571 YJL027CYJL027C 417 nt15.09■□□□□ 0.01
DOA4P32571 SRX1YKL086W 384 nt14.96□□□□□ -0.01
DOA4P32571 Q0297Q0297 156 nt14.85□□□□□ -0.03
DOA4P32571 DBP2YNL112W 1641 nt14.29□□□□□ -0.12
DOA4P32571 YCR051WYCR051W 669 nt14.19□□□□□ -0.14
DOA4P32571 YBR190WYBR190W 312 nt14.06□□□□□ -0.16
DOA4P32571 SCS3YGL126W 1143 nt13.83□□□□□ -0.2
DOA4P32571 RTC3YHR087W 336 nt13.76□□□□□ -0.21
DOA4P32571 TRN1tP(UGG)A 72 nt13.74□□□□□ -0.21
DOA4P32571 SUF9tP(UGG)F 72 nt13.74□□□□□ -0.21
DOA4P32571 SUF8tP(UGG)H 72 nt13.74□□□□□ -0.21
DOA4P32571 tP(UGG)LtP(UGG)L 72 nt13.74□□□□□ -0.21
DOA4P32571 SUF7tP(UGG)M 72 nt13.74□□□□□ -0.21
DOA4P32571 tP(UGG)N1tP(UGG)N1 72 nt13.74□□□□□ -0.21
DOA4P32571 tP(UGG)N2tP(UGG)N2 72 nt13.74□□□□□ -0.21
DOA4P32571 tP(UGG)O1tP(UGG)O1 72 nt13.74□□□□□ -0.21
DOA4P32571 SUF11tP(UGG)O2 72 nt13.74□□□□□ -0.21
DOA4P32571 CCC1YLR220W 969 nt13.65□□□□□ -0.22
DOA4P32571 SSA3YBL075C 1950 nt13.62□□□□□ -0.23
DOA4P32571 RVS167YDR388W 1449 nt13.41□□□□□ -0.26
DOA4P32571 YOL085CYOL085C 342 nt13.38□□□□□ -0.27
DOA4P32571 RPP1BYDL130W 321 nt13.34□□□□□ -0.27
DOA4P32571 PKP1YIL042C 1185 nt13.23□□□□□ -0.29
DOA4P32571 SCJ1YMR214W 1134 nt13.2□□□□□ -0.3
DOA4P32571 PUT4YOR348C 1884 nt13.05□□□□□ -0.32
DOA4P32571 tP(UGG)O3tP(UGG)O3 72 nt12.89□□□□□ -0.35
DOA4P32571 SHR5YOL110W 714 nt12.82□□□□□ -0.36
DOA4P32571 PET122YER153C 765 nt12.78□□□□□ -0.36
DOA4P32571 URN1YPR152C 1398 nt12.71□□□□□ -0.37
DOA4P32571 ARE1YCR048W 1833 nt12.69□□□□□ -0.38
DOA4P32571 POA1YBR022W 534 nt12.63□□□□□ -0.39
DOA4P32571 SAH1YER043C 1350 nt12.62□□□□□ -0.39
DOA4P32571 DEP1YAL013W 1218 nt12.6□□□□□ -0.39
DOA4P32571 OPI9YLR338W 858 nt12.59□□□□□ -0.39
DOA4P32571 SCR1SCR1 522 nt12.57□□□□□ -0.4
DOA4P32571 YHR049C-AYHR049C-A 297 nt12.55□□□□□ -0.4
DOA4P32571 YDJ1YNL064C 1230 nt12.46□□□□□ -0.41
DOA4P32571 RPN10YHR200W 807 nt12.45□□□□□ -0.42
DOA4P32571 BSC6YOL137W 1494 nt12.42□□□□□ -0.42
DOA4P32571 RRN5YLR141W 1092 nt12.38□□□□□ -0.43
DOA4P32571 YNL208WYNL208W 600 nt12.36□□□□□ -0.43
DOA4P32571 ATS1YAL020C 1002 nt12.28□□□□□ -0.44
DOA4P32571 GAR1YHR089C 618 nt12.27□□□□□ -0.45
DOA4P32571 BUD23YCR047C 828 nt12.26□□□□□ -0.45
DOA4P32571 PUN1YLR414C 792 nt12.24□□□□□ -0.45
DOA4P32571 PTC2YER089C 1395 nt12.17□□□□□ -0.46
DOA4P32571 YER088W-BYER088W-B 147 nt12.13□□□□□ -0.47
DOA4P32571 YJR018WYJR018W 363 nt12.1□□□□□ -0.47
DOA4P32571 SPT5YML010W 3192 nt12.07□□□□□ -0.48
DOA4P32571 NAB2YGL122C 1578 nt12.06□□□□□ -0.48
DOA4P32571 RSB1YOR049C 1065 nt12.03□□□□□ -0.48
DOA4P32571 SSA1YAL005C 1929 nt11.98□□□□□ -0.49
DOA4P32571 TIR1YER011W 765 nt11.87□□□□□ -0.51
DOA4P32571 SSA4YER103W 1929 nt11.87□□□□□ -0.51
DOA4P32571 FPR4YLR449W 1179 nt11.82□□□□□ -0.52
DOA4P32571 DAL1YIR027C 1383 nt11.81□□□□□ -0.52
DOA4P32571 FIS1YIL065C 468 nt11.81□□□□□ -0.52
DOA4P32571 FPS1YLL043W 2010 nt11.81□□□□□ -0.52
DOA4P32571 RPP2BYDR382W 333 nt11.78□□□□□ -0.52
DOA4P32571 YJR120WYJR120W 351 nt11.77□□□□□ -0.53
DOA4P32571 NVJ2YPR091C 2313 nt11.77□□□□□ -0.53
DOA4P32571 PAC11YDR488C 1602 nt11.76□□□□□ -0.53
DOA4P32571 INM2YDR287W 879 nt11.73□□□□□ -0.53
DOA4P32571 PHO4YFR034C 939 nt11.7□□□□□ -0.54
DOA4P32571 MEP2YNL142W 1500 nt11.7□□□□□ -0.54
DOA4P32571 Q0182Q0182 405 nt11.69□□□□□ -0.54
DOA4P32571 YPS1YLR120C 1710 nt11.6□□□□□ -0.55
DOA4P32571 YBL100CYBL100C 315 nt11.55□□□□□ -0.56
DOA4P32571 YHR165W-AYHR165W-A 312 nt11.54□□□□□ -0.56
DOA4P32571 DCW1YKL046C 1350 nt11.5□□□□□ -0.57
DOA4P32571 SRB2YHR041C 633 nt11.48□□□□□ -0.57
DOA4P32571 YDR095CYDR095C 411 nt11.46□□□□□ -0.57
DOA4P32571 BDH2YAL061W 1254 nt11.45□□□□□ -0.58
DOA4P32571 PST2YDR032C 597 nt11.43□□□□□ -0.58
DOA4P32571 BDF1YLR399C 2061 nt11.42□□□□□ -0.58
DOA4P32571 FUN26YAL022C 1554 nt11.4□□□□□ -0.58
DOA4P32571 EMI2YDR516C 1503 nt11.35□□□□□ -0.59
DOA4P32571 YMR090WYMR090W 684 nt11.35□□□□□ -0.59
DOA4P32571 ALF1YNL148C 765 nt11.35□□□□□ -0.59
DOA4P32571 TRM9YML014W 840 nt11.32□□□□□ -0.6
DOA4P32571 WWM1YFL010C 636 nt11.27□□□□□ -0.61
DOA4P32571 TAT1YBR069C 1860 nt11.26□□□□□ -0.61
DOA4P32571 RPP2AYOL039W 321 nt11.26□□□□□ -0.61
DOA4P32571 YBR220CYBR220C 1683 nt11.26□□□□□ -0.61
DOA4P32571 YDL221WYDL221W 552 nt11.24□□□□□ -0.61
DOA4P32571 PTP1YDL230W 1008 nt11.23□□□□□ -0.61
DOA4P32571 LSM3YLR438C-A 270 nt11.23□□□□□ -0.61
DOA4P32571 CAC2YML102W 1407 nt11.22□□□□□ -0.61
DOA4P32571 CCT6YDR188W 1641 nt11.2□□□□□ -0.62
DOA4P32571 SDH1YKL148C 1923 nt11.17□□□□□ -0.62
DOA4P32571 SUF2tP(AGG)C 72 nt11.16□□□□□ -0.62
DOA4P32571 SUF10tP(AGG)N 72 nt11.16□□□□□ -0.62
DOA4P32571 SIS1YNL007C 1059 nt11.14□□□□□ -0.63
DOA4P32571 YFL021C-AYFL021C-A 855 nt11.1□□□□□ -0.63
DOA4P32571 YGR021WYGR021W 873 nt11.1□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms