RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C DAP2P18962 818 aa2.62□□□□□ -1.99
NYV1YLR093C SPB1P25582 841 aaPredicted RBP2.62□□□□□ -1.99
NYV1YLR093C BRF1P29056 596 aa2.62□□□□□ -1.99
NYV1YLR093C KKQ8P36004 724 aa2.62□□□□□ -1.99
NYV1YLR093C ISC1P40015 477 aaKnown RBP2.62□□□□□ -1.99
NYV1YLR093C MEP1P40260 492 aa2.62□□□□□ -1.99
NYV1YLR093C NCA3P46955 337 aa2.62□□□□□ -1.99
NYV1YLR093C MDE1P47095 244 aa2.62□□□□□ -1.99
NYV1YLR093C YGL138CP53122 345 aa2.62□□□□□ -1.99
NYV1YLR093C CAF130P53280 1122 aaPredicted RBP2.62□□□□□ -1.99
NYV1YLR093C RRP45Q05636 305 aaKnown RBP2.62□□□□□ -1.99
NYV1YLR093C RAD61Q99359 647 aa2.62□□□□□ -1.99
NYV1YLR093C SPS4P09937 338 aa2.61□□□□□ -1.99
NYV1YLR093C RPS8AP0CX39 200 aaKnown RBP2.61□□□□□ -1.99
NYV1YLR093C RPS8BP0CX40 200 aaKnown RBP2.61□□□□□ -1.99
NYV1YLR093C CLN1P20437 546 aa2.61□□□□□ -1.99
NYV1YLR093C TRX1P22217 103 aaKnown RBP2.61□□□□□ -1.99
NYV1YLR093C RAD14P28519 371 aa2.61□□□□□ -1.99
NYV1YLR093C MSP1P28737 362 aa2.61□□□□□ -1.99
NYV1YLR093C MNS1P32906 549 aa2.61□□□□□ -1.99
NYV1YLR093C DAD2P36162 133 aa2.61□□□□□ -1.99
NYV1YLR093C YSW1P38280 609 aa2.61□□□□□ -1.99
NYV1YLR093C MBB1P39534 108 aa2.61□□□□□ -1.99
NYV1YLR093C MST28P39552 234 aa2.61□□□□□ -1.99
NYV1YLR093C SYG1P40528 902 aa2.61□□□□□ -1.99
NYV1YLR093C TRS85P46944 698 aa2.61□□□□□ -1.99
NYV1YLR093C YGR149WP48236 432 aa2.61□□□□□ -1.99
NYV1YLR093C YGL108CP53139 140 aa2.61□□□□□ -1.99
NYV1YLR093C MLC1P53141 149 aa2.61□□□□□ -1.99
NYV1YLR093C KTR5P53966 522 aaPredicted RBP2.61□□□□□ -1.99
NYV1YLR093C DBP9Q06218 594 aaKnown RBP2.61□□□□□ -1.99
NYV1YLR093C DCI1Q08558 271 aa2.61□□□□□ -1.99
NYV1YLR093C REX3Q12090 404 aa2.61□□□□□ -1.99
NYV1YLR093C PSY3Q12318 242 aa2.61□□□□□ -1.99
NYV1YLR093C RAV1P47104 1357 aa2.61□□□□□ -1.99
NYV1YLR093C LEU4P06208 619 aaKnown RBP2.6□□□□□ -1.99
NYV1YLR093C GPH1P06738 902 aaKnown RBP2.6□□□□□ -1.99
NYV1YLR093C RIP1P08067 215 aa2.6□□□□□ -1.99
NYV1YLR093C SAM1P10659 382 aaKnown RBP2.6□□□□□ -1.99
NYV1YLR093C ARO3P14843 370 aaKnown RBP2.6□□□□□ -1.99
NYV1YLR093C SEC63P14906 663 aa2.6□□□□□ -1.99
NYV1YLR093C SAM2P19358 384 aaKnown RBP2.6□□□□□ -1.99
NYV1YLR093C URA4P20051 364 aa2.6□□□□□ -1.99
NYV1YLR093C AFG1P32317 509 aa2.6□□□□□ -1.99
NYV1YLR093C YEL043WP32618 956 aa2.6□□□□□ -1.99
NYV1YLR093C GYP6P32806 458 aa2.6□□□□□ -1.99
NYV1YLR093C RIB5P38145 238 aa2.6□□□□□ -1.99
NYV1YLR093C NTC20P38302 140 aaPredicted RBP2.6□□□□□ -1.99
NYV1YLR093C MLH1P38920 769 aa2.6□□□□□ -1.99
NYV1YLR093C MTM1P53320 366 aa2.6□□□□□ -1.99
NYV1YLR093C CWC25P53854 179 aaKnown RBP2.6□□□□□ -1.99
NYV1YLR093C RHO5P53879 331 aaKnown RBP2.6□□□□□ -1.99
NYV1YLR093C PRO2P54885 456 aaKnown RBP2.6□□□□□ -1.99
NYV1YLR093C YDR341CQ05506 607 aaKnown RBP2.6□□□□□ -1.99
NYV1YLR093C YLR456WQ06199 204 aa2.6□□□□□ -1.99
NYV1YLR093C RKM1Q08961 583 aaPredicted RBP2.6□□□□□ -1.99
NYV1YLR093C VPS54Q12071 889 aa2.6□□□□□ -1.99
NYV1YLR093C VAM3Q12241 283 aa2.6□□□□□ -1.99
NYV1YLR093C RHO2P06781 192 aa2.59□□□□□ -1.99
NYV1YLR093C NFT1P0CE68 1218 aa2.59□□□□□ -1.99
NYV1YLR093C SPO7P18410 259 aa2.59□□□□□ -1.99
NYV1YLR093C PHO84P25297 587 aaKnown RBP2.59□□□□□ -1.99
NYV1YLR093C KRE2P27809 442 aa2.59□□□□□ -1.99
NYV1YLR093C HIR2P32480 875 aa2.59□□□□□ -1.99
NYV1YLR093C SMI1P32566 505 aa2.59□□□□□ -1.99
NYV1YLR093C RFC3P38629 340 aa2.59□□□□□ -1.99
NYV1YLR093C VHS2P40463 436 aa2.59□□□□□ -1.99
NYV1YLR093C CHS6P40955 746 aa2.59□□□□□ -1.99
NYV1YLR093C GAB1P41733 394 aa2.59□□□□□ -1.99
NYV1YLR093C TFG2P41896 400 aaPredicted RBP2.59□□□□□ -1.99
NYV1YLR093C MPP10P47083 593 aaKnown RBP2.59□□□□□ -1.99
NYV1YLR093C OCA1P50946 238 aaPredicted RBP2.59□□□□□ -1.99
NYV1YLR093C PRP3Q03338 469 aaPredicted RBP2.59□□□□□ -1.99
NYV1YLR093C YMR130WQ04223 302 aa2.59□□□□□ -1.99
NYV1YLR093C MDM30Q05930 598 aa2.59□□□□□ -1.99
NYV1YLR093C DCS1Q06151 350 aa2.59□□□□□ -1.99
NYV1YLR093C HSP42Q12329 375 aa2.59□□□□□ -1.99
NYV1YLR093C COX3P00420 269 aa2.58□□□□□ -2
NYV1YLR093C ATP10P18496 279 aa2.58□□□□□ -2
NYV1YLR093C SIN4P32259 974 aa2.58□□□□□ -2
NYV1YLR093C NIP1P32497 812 aaKnown RBP2.58□□□□□ -2
NYV1YLR093C NUP2P32499 720 aa2.58□□□□□ -2
NYV1YLR093C ARA1P38115 344 aa2.58□□□□□ -2
NYV1YLR093C POP1P41812 875 aa2.58□□□□□ -2
NYV1YLR093C BRO1P48582 844 aa2.58□□□□□ -2
NYV1YLR093C SHE4P51534 789 aa2.58□□□□□ -2
NYV1YLR093C PDR16P53860 351 aaKnown RBP2.58□□□□□ -2
NYV1YLR093C NCS2P53923 493 aaPredicted RBP2.58□□□□□ -2
NYV1YLR093C HXT11P54862 567 aa2.58□□□□□ -2
NYV1YLR093C PPM1Q04081 328 aa2.58□□□□□ -2
NYV1YLR093C MGR3Q04472 501 aa2.58□□□□□ -2
NYV1YLR093C RRP9Q06506 573 aaKnown RBP2.58□□□□□ -2
NYV1YLR093C NDL1Q06568 189 aa2.58□□□□□ -2
NYV1YLR093C PML1Q07930 204 aaPredicted RBP2.58□□□□□ -2
NYV1YLR093C IRC25Q07951 179 aa2.58□□□□□ -2
NYV1YLR093C MUM3Q08750 479 aa2.58□□□□□ -2
NYV1YLR093C AEP3Q12089 606 aa2.58□□□□□ -2
NYV1YLR093C MED2Q12124 431 aa2.58□□□□□ -2
NYV1YLR093C STF1P01098 86 aa2.57□□□□□ -2
NYV1YLR093C ASC1P38011 319 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms