RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C MTC1P47018 478 aaKnown RBP15.49■□□□□ 0.07
NYV1YLR093C DRS1P32892 752 aaKnown RBP14.35□□□□□ -0.11
NYV1YLR093C FAP1P53971 965 aa13.88□□□□□ -0.19
NYV1YLR093C PRI1P10363 409 aa13.07□□□□□ -0.32
NYV1YLR093C PRY3P47033 881 aa13.05□□□□□ -0.32
NYV1YLR093C AAD16Q02895 342 aa12.99□□□□□ -0.33
NYV1YLR093C ISW2Q08773 1120 aa12.84□□□□□ -0.35
NYV1YLR093C RPG1P38249 964 aaKnown RBP12.66□□□□□ -0.38
NYV1YLR093C DIP2Q12220 943 aaPredicted RBP12.62□□□□□ -0.39
NYV1YLR093C YCK3P39962 524 aa12.37□□□□□ -0.43
NYV1YLR093C HAA1Q12753 694 aaKnown RBP12.33□□□□□ -0.44
NYV1YLR093C TSR3Q12094 313 aaKnown RBP12.28□□□□□ -0.44
NYV1YLR093C RSE1Q04693 1361 aaKnown RBP12.23□□□□□ -0.45
NYV1YLR093C AVT3P36062 692 aa12.18□□□□□ -0.46
NYV1YLR093C BFR2Q06631 534 aaKnown RBP11.92□□□□□ -0.5
NYV1YLR093C MRPL32P25348 183 aa11.85□□□□□ -0.51
NYV1YLR093C RPL17AP05740 184 aaKnown RBP11.82□□□□□ -0.52
NYV1YLR093C RPL17BP46990 184 aaKnown RBP11.82□□□□□ -0.52
NYV1YLR093C REB1P21538 810 aa11.77□□□□□ -0.53
NYV1YLR093C YGL015CP33199 130 aa11.4□□□□□ -0.58
NYV1YLR093C SPT21P35209 758 aa11.36□□□□□ -0.59
NYV1YLR093C CDC27P38042 758 aa11.23□□□□□ -0.61
NYV1YLR093C YKR023WP36119 530 aaKnown RBP11.21□□□□□ -0.61
NYV1YLR093C UBP10P53874 792 aaPredicted RBP11.01□□□□□ -0.65
NYV1YLR093C TFC8Q12308 588 aa10.99□□□□□ -0.65
NYV1YLR093C RIM101P33400 625 aa10.96□□□□□ -0.65
NYV1YLR093C HOP09932 586 aa10.93□□□□□ -0.66
NYV1YLR093C MAP2P38174 421 aaKnown RBP10.89□□□□□ -0.67
NYV1YLR093C DCD1P06773 312 aa10.85□□□□□ -0.67
NYV1YLR093C SCY1P53009 804 aa10.65□□□□□ -0.7
NYV1YLR093C BCH2P36122 765 aa10.61□□□□□ -0.71
NYV1YLR093C SLX5P32828 619 aaKnown RBP10.57□□□□□ -0.72
NYV1YLR093C OXP1P28273 1286 aa10.55□□□□□ -0.72
NYV1YLR093C TIF4632P39936 914 aaKnown RBP10.54□□□□□ -0.72
NYV1YLR093C TFA1P36100 482 aa10.5□□□□□ -0.73
NYV1YLR093C TGL3P40308 642 aa10.5□□□□□ -0.73
NYV1YLR093C BUD31P25337 157 aaPredicted RBP10.48□□□□□ -0.73
NYV1YLR093C YIL055CP40523 627 aaKnown RBP10.38□□□□□ -0.75
NYV1YLR093C PTP3P40048 928 aa10.36□□□□□ -0.75
NYV1YLR093C EPS1P40557 701 aa10.35□□□□□ -0.75
NYV1YLR093C BDF1P35817 686 aa10.31□□□□□ -0.76
NYV1YLR093C RSM7P47150 247 aa10.26□□□□□ -0.77
NYV1YLR093C BBC1P47068 1157 aa10.19□□□□□ -0.78
NYV1YLR093C UBP9P39967 754 aa10.18□□□□□ -0.78
NYV1YLR093C YAH1Q12184 172 aaKnown RBP10.17□□□□□ -0.78
NYV1YLR093C AI2P03876 854 aa10.16□□□□□ -0.78
NYV1YLR093C NSR1P27476 414 aaKnown RBP RIP-Chip data10.1□□□□□ -0.79not detected
NYV1YLR093C MST1P07236 462 aa10.09□□□□□ -0.79
NYV1YLR093C YLR271WQ06152 274 aa10.06□□□□□ -0.8
NYV1YLR093C YOR238WQ08634 303 aa10.01□□□□□ -0.81
NYV1YLR093C PSD2P53037 1138 aaKnown RBP9.96□□□□□ -0.82
NYV1YLR093C SSP1P38871 571 aa9.95□□□□□ -0.82
NYV1YLR093C YAP5P40574 245 aa9.94□□□□□ -0.82
NYV1YLR093C SIS1P25294 352 aaKnown RBP9.93□□□□□ -0.82
NYV1YLR093C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
NYV1YLR093C YBL029C-AQ3E756 94 aa9.83□□□□□ -0.84
NYV1YLR093C MRM1P25270 412 aa9.77□□□□□ -0.85
NYV1YLR093C VNX1P42839 908 aa9.77□□□□□ -0.85
NYV1YLR093C MGA2P40578 1113 aa9.73□□□□□ -0.85
NYV1YLR093C GTT3P39996 337 aa9.69□□□□□ -0.86
NYV1YLR093C CST9Q06032 482 aa9.68□□□□□ -0.86
NYV1YLR093C SPP1Q03012 353 aa9.66□□□□□ -0.86
NYV1YLR093C WSC3Q12215 556 aa9.66□□□□□ -0.86
NYV1YLR093C TIF11P38912 153 aaKnown RBP9.62□□□□□ -0.87
NYV1YLR093C RTG3P38165 486 aa9.61□□□□□ -0.87
NYV1YLR093C VPS29P38759 282 aa9.59□□□□□ -0.87
NYV1YLR093C YMR1P47147 688 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87not detected
NYV1YLR093C PIB1Q06651 286 aa9.58□□□□□ -0.88
NYV1YLR093C MSB4Q12317 492 aa9.54□□□□□ -0.88
NYV1YLR093C DBP1P24784 617 aaKnown RBP9.51□□□□□ -0.89
NYV1YLR093C FKH1P40466 484 aa9.5□□□□□ -0.89
NYV1YLR093C IOC2Q12072 812 aa9.48□□□□□ -0.89
NYV1YLR093C EAP1P36041 632 aaKnown RBP9.47□□□□□ -0.89
NYV1YLR093C STS1P38637 319 aa9.47□□□□□ -0.89
NYV1YLR093C ULI1P43604 169 aa9.47□□□□□ -0.89
NYV1YLR093C AIR2Q12476 344 aaKnown RBP9.47□□□□□ -0.89
NYV1YLR093C YOL036WQ08206 761 aa9.45□□□□□ -0.9
NYV1YLR093C VMA1P17255 1071 aaKnown RBP9.44□□□□□ -0.9
NYV1YLR093C RCR1P38212 213 aa9.44□□□□□ -0.9
NYV1YLR093C YFR006WP43590 535 aa9.44□□□□□ -0.9
NYV1YLR093C SAM3Q08986 587 aa9.44□□□□□ -0.9
NYV1YLR093C LDB19Q12502 818 aa9.44□□□□□ -0.9
NYV1YLR093C SET4P42948 560 aa9.38□□□□□ -0.91
NYV1YLR093C YJL171CP46992 396 aa9.35□□□□□ -0.91
NYV1YLR093C TRP5P00931 707 aaKnown RBP9.34□□□□□ -0.91
NYV1YLR093C ABP1P15891 592 aaKnown RBP9.32□□□□□ -0.92
NYV1YLR093C RTG1P32607 177 aa9.28□□□□□ -0.92
NYV1YLR093C YNL035CP53962 389 aaKnown RBP9.28□□□□□ -0.92
NYV1YLR093C BMT6Q12291 365 aa9.27□□□□□ -0.93
NYV1YLR093C SEC61P32915 480 aa9.26□□□□□ -0.93
NYV1YLR093C GYP5Q12344 894 aa9.25□□□□□ -0.93
NYV1YLR093C MAK11P20484 414 aaKnown RBP9.23□□□□□ -0.93
NYV1YLR093C NCR1Q12200 1170 aa9.22□□□□□ -0.93
NYV1YLR093C JIP4Q03361 876 aa9.21□□□□□ -0.94
NYV1YLR093C RAM2P29703 316 aa9.2□□□□□ -0.94
NYV1YLR093C HTA1P04911 132 aaKnown RBP9.19□□□□□ -0.94
NYV1YLR093C HTA2P04912 132 aa9.19□□□□□ -0.94
NYV1YLR093C DAN4P47179 1161 aa9.17□□□□□ -0.94
NYV1YLR093C DCW1P36091 449 aa9.13□□□□□ -0.95
NYV1YLR093C TFG1P41895 735 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms