RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C RKM1Q08961 583 aaPredicted RBP2.28□□□□□ -2.04
TPM2YIL138C MED2Q12124 431 aa2.28□□□□□ -2.04
TPM2YIL138C PKH2Q12236 1081 aaKnown RBP2.28□□□□□ -2.04
TPM2YIL138C STU1P38198 1513 aa2.27□□□□□ -2.05
TPM2YIL138C SCC2Q04002 1493 aa2.27□□□□□ -2.05
TPM2YIL138C MMS22Q06164 1454 aa2.27□□□□□ -2.05
TPM2YIL138C TEF1P02994 458 aaKnown RBP2.27□□□□□ -2.05
TPM2YIL138C ARG4P04076 463 aaPredicted RBP2.27□□□□□ -2.05
TPM2YIL138C HOM3P10869 527 aa2.27□□□□□ -2.05
TPM2YIL138C CPR2P23285 205 aa2.27□□□□□ -2.05
TPM2YIL138C TIP1P27654 210 aaPredicted RBP2.27□□□□□ -2.05
TPM2YIL138C RRN10P38204 145 aa2.27□□□□□ -2.05
TPM2YIL138C RFC3P38629 340 aa2.27□□□□□ -2.05
TPM2YIL138C SIM1P40472 476 aa2.27□□□□□ -2.05
TPM2YIL138C NCA3P46955 337 aa2.27□□□□□ -2.05
TPM2YIL138C PHB2P50085 310 aa2.27□□□□□ -2.05
TPM2YIL138C CIK1Q01649 594 aa2.27□□□□□ -2.05
TPM2YIL138C RNY1Q02933 434 aaKnown RBP2.27□□□□□ -2.05
TPM2YIL138C GIP3Q03016 1276 aa2.27□□□□□ -2.05
TPM2YIL138C BET5Q03630 159 aa2.27□□□□□ -2.05
TPM2YIL138C GYL1Q04322 720 aa2.27□□□□□ -2.05
TPM2YIL138C MDM30Q05930 598 aa2.27□□□□□ -2.05
TPM2YIL138C SGT1Q08446 395 aa2.27□□□□□ -2.05
TPM2YIL138C AEP3Q12089 606 aa2.27□□□□□ -2.05
TPM2YIL138C TOP2P06786 1428 aaKnown RBP2.26□□□□□ -2.05
TPM2YIL138C SMC4Q12267 1418 aa2.26□□□□□ -2.05
TPM2YIL138C ADH2P00331 348 aaKnown RBP2.26□□□□□ -2.05
TPM2YIL138C SCEIP03882 235 aa2.26□□□□□ -2.05
TPM2YIL138C SLY1P22213 666 aa2.26□□□□□ -2.05
TPM2YIL138C RRP4P38792 359 aaKnown RBP2.26□□□□□ -2.05
TPM2YIL138C PHO86P46956 311 aa2.26□□□□□ -2.05
TPM2YIL138C YGR111WP53265 400 aa2.26□□□□□ -2.05
TPM2YIL138C YNR048WP53740 393 aa2.26□□□□□ -2.05
TPM2YIL138C RSN1Q03516 953 aa2.26□□□□□ -2.05
TPM2YIL138C MRPL35Q06678 367 aa2.26□□□□□ -2.05
TPM2YIL138C YLR108CQ12259 485 aa2.26□□□□□ -2.05
TPM2YIL138C ORT1Q12375 292 aa2.26□□□□□ -2.05
TPM2YIL138C MTR10Q99189 972 aa2.26□□□□□ -2.05
TPM2YIL138C YOR1P53049 1477 aa2.26□□□□□ -2.05
TPM2YIL138C ILV5P06168 395 aaKnown RBP2.25□□□□□ -2.05
TPM2YIL138C CPR4P25334 318 aa2.25□□□□□ -2.05
TPM2YIL138C CTR86P25355 563 aa2.25□□□□□ -2.05
TPM2YIL138C SPS22P25380 463 aa2.25□□□□□ -2.05
TPM2YIL138C GEX1P25596 615 aa2.25□□□□□ -2.05
TPM2YIL138C CDC60P26637 1090 aaKnown RBP2.25□□□□□ -2.05
TPM2YIL138C ITR1P30605 584 aa2.25□□□□□ -2.05
TPM2YIL138C SMY1P32364 656 aaKnown RBP2.25□□□□□ -2.05
TPM2YIL138C KKQ8P36004 724 aa2.25□□□□□ -2.05
TPM2YIL138C YBR056WP38081 501 aa2.25□□□□□ -2.05
TPM2YIL138C MIX23P38162 196 aa2.25□□□□□ -2.05
TPM2YIL138C YML6P51998 286 aa2.25□□□□□ -2.05
TPM2YIL138C RPT4P53549 437 aaKnown RBP2.25□□□□□ -2.05
TPM2YIL138C GPI15P53961 229 aa2.25□□□□□ -2.05
TPM2YIL138C TAF12Q03761 539 aa2.25□□□□□ -2.05
TPM2YIL138C PPM1Q04081 328 aa2.25□□□□□ -2.05
TPM2YIL138C SXM1Q04175 944 aaKnown RBP2.25□□□□□ -2.05
TPM2YIL138C DCI1Q08558 271 aa2.25□□□□□ -2.05
TPM2YIL138C SNX3Q08826 162 aaKnown RBP2.25□□□□□ -2.05
TPM2YIL138C GPM3Q12326 303 aa2.25□□□□□ -2.05
TPM2YIL138C YCF1P39109 1515 aaKnown RBP2.25□□□□□ -2.05
TPM2YIL138C MYO4P32492 1471 aa2.25□□□□□ -2.05
TPM2YIL138C MID2P36027 376 aa2.24□□□□□ -2.05
TPM2YIL138C HEL1P36113 551 aa2.24□□□□□ -2.05
TPM2YIL138C FAD1P38913 306 aa2.24□□□□□ -2.05
TPM2YIL138C PCF11P39081 626 aaPredicted RBP2.24□□□□□ -2.05
TPM2YIL138C SER3P40054 469 aa2.24□□□□□ -2.05
TPM2YIL138C YJL055WP47044 245 aa2.24□□□□□ -2.05
TPM2YIL138C OAZ1Q02803 292 aa2.24□□□□□ -2.05
TPM2YIL138C YMR181CQ03231 154 aa2.24□□□□□ -2.05
TPM2YIL138C SKI7Q08491 747 aaPredicted RBP2.24□□□□□ -2.05
TPM2YIL138C BUG1Q12191 341 aa2.24□□□□□ -2.05
TPM2YIL138C WTM1Q12363 437 aaKnown RBP2.24□□□□□ -2.05
TPM2YIL138C RMD5Q12508 421 aa2.24□□□□□ -2.05
TPM2YIL138C RAD61Q99359 647 aa2.24□□□□□ -2.05
TPM2YIL138C UFD4P33202 1483 aa2.24□□□□□ -2.05
TPM2YIL138C ADE4P04046 510 aaKnown RBP2.23□□□□□ -2.05
TPM2YIL138C SPO12P17123 173 aa2.23□□□□□ -2.05
TPM2YIL138C RAD57P25301 460 aa2.23□□□□□ -2.05
TPM2YIL138C MUD1P32605 298 aaKnown RBP2.23□□□□□ -2.05
TPM2YIL138C PEX5P35056 612 aa2.23□□□□□ -2.05
TPM2YIL138C MRP21P38175 177 aa2.23□□□□□ -2.05
TPM2YIL138C ZTA1P38230 334 aaKnown RBP2.23□□□□□ -2.05
TPM2YIL138C VHS2P40463 436 aa2.23□□□□□ -2.05
TPM2YIL138C LCB2P40970 561 aa2.23□□□□□ -2.05
TPM2YIL138C BUD27P43573 796 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
TPM2YIL138C AZR1P50080 613 aa2.23□□□□□ -2.05
TPM2YIL138C PIB2P53191 635 aa2.23□□□□□ -2.05
TPM2YIL138C TOF1P53840 1238 aa2.23□□□□□ -2.05
TPM2YIL138C HXT11P54862 567 aa2.23□□□□□ -2.05
TPM2YIL138C TSA2Q04120 196 aa2.23□□□□□ -2.05
TPM2YIL138C TSR1Q07381 788 aaKnown RBP2.23□□□□□ -2.05
TPM2YIL138C SPE3Q12074 293 aaKnown RBP2.23□□□□□ -2.05
TPM2YIL138C BPT1P14772 1559 aa2.23□□□□□ -2.05
TPM2YIL138C RKR1Q04781 1562 aa2.23□□□□□ -2.05
TPM2YIL138C PDE2P06776 526 aa2.22□□□□□ -2.05
TPM2YIL138C IMA3P0CW40 589 aa2.22□□□□□ -2.05
TPM2YIL138C IMA4P0CW41 589 aa2.22□□□□□ -2.05
TPM2YIL138C ARO3P14843 370 aaKnown RBP2.22□□□□□ -2.05
TPM2YIL138C PET123P17558 318 aa2.22□□□□□ -2.05
TPM2YIL138C MNE1P24720 663 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms