RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C MTC1P47018 478 aaKnown RBP14□□□□□ -0.17
TPM2YIL138C FAP1P53971 965 aa13.18□□□□□ -0.3
TPM2YIL138C DRS1P32892 752 aaKnown RBP12.73□□□□□ -0.37
TPM2YIL138C PRY3P47033 881 aa12.4□□□□□ -0.42
TPM2YIL138C PRI1P10363 409 aa12.02□□□□□ -0.49
TPM2YIL138C AAD16Q02895 342 aa11.99□□□□□ -0.49
TPM2YIL138C YCK3P39962 524 aa11.69□□□□□ -0.54
TPM2YIL138C ISW2Q08773 1120 aa11.65□□□□□ -0.54
TPM2YIL138C RPG1P38249 964 aaKnown RBP11.62□□□□□ -0.55
TPM2YIL138C HAA1Q12753 694 aaKnown RBP11.52□□□□□ -0.57
TPM2YIL138C TSR3Q12094 313 aaKnown RBP11.43□□□□□ -0.58
TPM2YIL138C DIP2Q12220 943 aaPredicted RBP11.29□□□□□ -0.6
TPM2YIL138C RSE1Q04693 1361 aaKnown RBP10.99□□□□□ -0.65
TPM2YIL138C MRPL32P25348 183 aa10.89□□□□□ -0.67
TPM2YIL138C AVT3P36062 692 aa10.76□□□□□ -0.69
TPM2YIL138C RPL17AP05740 184 aaKnown RBP10.72□□□□□ -0.69
TPM2YIL138C RPL17BP46990 184 aaKnown RBP10.72□□□□□ -0.69
TPM2YIL138C REB1P21538 810 aa10.68□□□□□ -0.7
TPM2YIL138C YGL015CP33199 130 aa10.51□□□□□ -0.73
TPM2YIL138C BFR2Q06631 534 aaKnown RBP10.38□□□□□ -0.75
TPM2YIL138C CDC27P38042 758 aa10.36□□□□□ -0.75
TPM2YIL138C YKR023WP36119 530 aaKnown RBP10.21□□□□□ -0.77
TPM2YIL138C SPT21P35209 758 aa10.2□□□□□ -0.78
TPM2YIL138C BUD31P25337 157 aaPredicted RBP10.18□□□□□ -0.78
TPM2YIL138C DCD1P06773 312 aa10.06□□□□□ -0.8
TPM2YIL138C MAP2P38174 421 aaKnown RBP10.06□□□□□ -0.8
TPM2YIL138C HOP09932 586 aa10.05□□□□□ -0.8
TPM2YIL138C UBP10P53874 792 aaPredicted RBP9.98□□□□□ -0.81
TPM2YIL138C TFC8Q12308 588 aa9.97□□□□□ -0.81
TPM2YIL138C SCY1P53009 804 aa9.79□□□□□ -0.84
TPM2YIL138C RIM101P33400 625 aa9.74□□□□□ -0.85
TPM2YIL138C BCH2P36122 765 aa9.65□□□□□ -0.86
TPM2YIL138C SIS1P25294 352 aaKnown RBP9.63□□□□□ -0.87
TPM2YIL138C SLX5P32828 619 aaKnown RBP9.62□□□□□ -0.87
TPM2YIL138C TIF4632P39936 914 aaKnown RBP9.56□□□□□ -0.88
TPM2YIL138C TGL3P40308 642 aa9.53□□□□□ -0.88
TPM2YIL138C OXP1P28273 1286 aa9.47□□□□□ -0.89
TPM2YIL138C UBP9P39967 754 aa9.37□□□□□ -0.91
TPM2YIL138C EPS1P40557 701 aa9.37□□□□□ -0.91
TPM2YIL138C BDF1P35817 686 aa9.35□□□□□ -0.91
TPM2YIL138C PTP3P40048 928 aa9.31□□□□□ -0.92
TPM2YIL138C YIL055CP40523 627 aaKnown RBP9.26□□□□□ -0.93
TPM2YIL138C YAH1Q12184 172 aaKnown RBP9.17□□□□□ -0.94
TPM2YIL138C RSM7P47150 247 aa9.13□□□□□ -0.95
TPM2YIL138C YBL029C-AQ3E756 94 aa9.11□□□□□ -0.95
TPM2YIL138C AI2P03876 854 aa9.1□□□□□ -0.95
TPM2YIL138C MST1P07236 462 aa9.08□□□□□ -0.96
TPM2YIL138C BBC1P47068 1157 aa9.06□□□□□ -0.96
TPM2YIL138C YOR238WQ08634 303 aa9.06□□□□□ -0.96
TPM2YIL138C YAP5P40574 245 aa8.94□□□□□ -0.98
TPM2YIL138C VNX1P42839 908 aa8.94□□□□□ -0.98
TPM2YIL138C YLR271WQ06152 274 aa8.94□□□□□ -0.98
TPM2YIL138C NSR1P27476 414 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98 RIP-Chip
TPM2YIL138C WSC3Q12215 556 aa8.93□□□□□ -0.98
TPM2YIL138C SPP1Q03012 353 aa8.86□□□□□ -0.99
TPM2YIL138C PIB1Q06651 286 aa8.85□□□□□ -0.99
TPM2YIL138C TFA1P36100 482 aa8.84□□□□□ -0.99
TPM2YIL138C PSD2P53037 1138 aaKnown RBP8.82□□□□□ -1
TPM2YIL138C MRM1P25270 412 aa8.78□□□□□ -1
TPM2YIL138C GTT3P39996 337 aa8.77□□□□□ -1.01
TPM2YIL138C TIF11P38912 153 aaKnown RBP8.72□□□□□ -1.01
TPM2YIL138C SSP1P38871 571 aa8.69□□□□□ -1.02
TPM2YIL138C AIR2Q12476 344 aaKnown RBP8.69□□□□□ -1.02
TPM2YIL138C FKH1P40466 484 aa8.65□□□□□ -1.02
TPM2YIL138C CST9Q06032 482 aa8.64□□□□□ -1.03
TPM2YIL138C ULI1P43604 169 aa8.63□□□□□ -1.03
TPM2YIL138C LDB19Q12502 818 aa8.63□□□□□ -1.03
TPM2YIL138C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
TPM2YIL138C IOC2Q12072 812 aa8.6□□□□□ -1.03
TPM2YIL138C YFR006WP43590 535 aa8.59□□□□□ -1.03
TPM2YIL138C YJL171CP46992 396 aa8.59□□□□□ -1.03
TPM2YIL138C VPS29P38759 282 aa8.57□□□□□ -1.04
TPM2YIL138C SET4P42948 560 aa8.55□□□□□ -1.04
TPM2YIL138C DBP1P24784 617 aaKnown RBP8.54□□□□□ -1.04
TPM2YIL138C YOL036WQ08206 761 aa8.52□□□□□ -1.05
TPM2YIL138C YMR1P47147 688 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05 RIP-Chip
TPM2YIL138C RTG3P38165 486 aa8.5□□□□□ -1.05
TPM2YIL138C RCR1P38212 213 aa8.5□□□□□ -1.05
TPM2YIL138C STS1P38637 319 aa8.5□□□□□ -1.05
TPM2YIL138C MGA2P40578 1113 aa8.49□□□□□ -1.05
TPM2YIL138C MSB4Q12317 492 aa8.47□□□□□ -1.05
TPM2YIL138C TRP5P00931 707 aaKnown RBP8.46□□□□□ -1.06
TPM2YIL138C BMT6Q12291 365 aa8.46□□□□□ -1.06
TPM2YIL138C VMA1P17255 1071 aaKnown RBP8.45□□□□□ -1.06
TPM2YIL138C RTG1P32607 177 aa8.44□□□□□ -1.06
TPM2YIL138C EAP1P36041 632 aaKnown RBP8.43□□□□□ -1.06
TPM2YIL138C NCR1Q12200 1170 aa8.37□□□□□ -1.07
TPM2YIL138C SAM3Q08986 587 aa8.36□□□□□ -1.07
TPM2YIL138C YNL035CP53962 389 aaKnown RBP8.34□□□□□ -1.07
TPM2YIL138C SEC61P32915 480 aa8.28□□□□□ -1.08
TPM2YIL138C DCW1P36091 449 aa8.26□□□□□ -1.09
TPM2YIL138C GYP5Q12344 894 aa8.26□□□□□ -1.09
TPM2YIL138C DAN4P47179 1161 aa8.23□□□□□ -1.09
TPM2YIL138C SAP30P38429 201 aa8.22□□□□□ -1.09
TPM2YIL138C TFG1P41895 735 aaPredicted RBP8.19□□□□□ -1.1
TPM2YIL138C HTA1P04911 132 aaKnown RBP8.18□□□□□ -1.1
TPM2YIL138C HTA2P04912 132 aa8.18□□□□□ -1.1
TPM2YIL138C YEL023CP39992 682 aa8.16□□□□□ -1.1
TPM2YIL138C JIP4Q03361 876 aa8.16□□□□□ -1.1
TPM2YIL138C ABP1P15891 592 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms