RNA–Protein interactions for RNA: YHR121W

LSM12, Transcript of Protein of unknown function that may function in RNA processing, yeast

Gene LSM12, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM12	YHR121W	YOR1	P53049	1477 aa		4.1	□□□□□ -1.75
LSM12	YHR121W	TOR1	P35169	2470 aa		4.09	□□□□□ -1.75
LSM12	YHR121W	HXT3	P32466	567 aa	Known RBP	4.09	□□□□□ -1.75
LSM12	YHR121W	MRP21	P38175	177 aa		4.09	□□□□□ -1.75
LSM12	YHR121W	YJR011C	P47086	261 aa	Predicted RBP	4.09	□□□□□ -1.75
LSM12	YHR121W	BET5	Q03630	159 aa		4.09	□□□□□ -1.75
LSM12	YHR121W	SYF1	Q04048	859 aa	Predicted RBP	4.09	□□□□□ -1.75
LSM12	YHR121W	ORT1	Q12375	292 aa		4.09	□□□□□ -1.75
LSM12	YHR121W	GRX6	Q12438	231 aa		4.09	□□□□□ -1.75
LSM12	YHR121W	CYC3	P06182	269 aa		4.08	□□□□□ -1.76
LSM12	YHR121W	HAP1	P0CE41	1502 aa		4.08	□□□□□ -1.76
LSM12	YHR121W	KAR9	P32526	644 aa		4.08	□□□□□ -1.76
LSM12	YHR121W	ARA1	P38115	344 aa		4.08	□□□□□ -1.76
LSM12	YHR121W	FMS1	P50264	508 aa		4.08	□□□□□ -1.76
LSM12	YHR121W	RRI2	Q12348	645 aa		4.08	□□□□□ -1.76
LSM12	YHR121W	BUD3	P25558	1636 aa		4.07	□□□□□ -1.76
LSM12	YHR121W	SEC63	P14906	663 aa		4.07	□□□□□ -1.76
LSM12	YHR121W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
LSM12	YHR121W	BRO1	P48582	844 aa		4.07	□□□□□ -1.76
LSM12	YHR121W	YDL121C	Q07541	149 aa		4.07	□□□□□ -1.76
LSM12	YHR121W	CUE5	Q08412	411 aa	Known RBP	4.07	□□□□□ -1.76
LSM12	YHR121W	RTP1	Q12751	981 aa		4.07	□□□□□ -1.76
LSM12	YHR121W	SPO7	P18410	259 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	NUP2	P32499	720 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	PCF11	P39081	626 aa	Predicted RBP	4.06	□□□□□ -1.76
LSM12	YHR121W	GAB1	P41733	394 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	AZR1	P50080	613 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	SIL1	Q08199	421 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	SKI7	Q08491	747 aa	Predicted RBP	4.06	□□□□□ -1.76
LSM12	YHR121W	HSP42	Q12329	375 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	YRM1	Q12340	786 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	RMD5	Q12508	421 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	TY1B-JR2	P47100	1755 aa	Known RBP	4.06	□□□□□ -1.76
LSM12	YHR121W	TY1B-ER2	Q03619	1755 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	TY1B-MR1	Q04214	1755 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.06	□□□□□ -1.76
LSM12	YHR121W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.06	□□□□□ -1.76
LSM12	YHR121W	TY1B-NL1	Q12112	1755 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	TY1B-GR1	Q12141	1755 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	TY1B-BL	Q12490	1755 aa		4.06	□□□□□ -1.76
LSM12	YHR121W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.06	□□□□□ -1.76
LSM12	YHR121W	STU1	P38198	1513 aa		4.05	□□□□□ -1.76
LSM12	YHR121W	BCK1	Q01389	1478 aa		4.05	□□□□□ -1.76
LSM12	YHR121W	NUP157	P40064	1391 aa	Known RBP	4.05	□□□□□ -1.76
LSM12	YHR121W	SIN4	P32259	974 aa		4.05	□□□□□ -1.76
LSM12	YHR121W	NPL6	P32832	435 aa		4.05	□□□□□ -1.76
LSM12	YHR121W	MID2	P36027	376 aa		4.05	□□□□□ -1.76
LSM12	YHR121W	UTP18	P40362	594 aa	Predicted RBP	4.05	□□□□□ -1.76
LSM12	YHR121W	SSU1	P41930	458 aa		4.05	□□□□□ -1.76
LSM12	YHR121W	IRC6	P43615	237 aa		4.05	□□□□□ -1.76
LSM12	YHR121W	RHO5	P53879	331 aa	Known RBP	4.05	□□□□□ -1.76
LSM12	YHR121W	MET17	P06106	444 aa		4.04	□□□□□ -1.76
LSM12	YHR121W	NAM2	P11325	894 aa		4.04	□□□□□ -1.76
LSM12	YHR121W	CKA1	P15790	372 aa		4.04	□□□□□ -1.76
LSM12	YHR121W	CLC1	P17891	233 aa		4.04	□□□□□ -1.76
LSM12	YHR121W	RFC3	P38629	340 aa		4.04	□□□□□ -1.76
LSM12	YHR121W	YHR131C	P38835	850 aa		4.04	□□□□□ -1.76
LSM12	YHR121W	AIM10	P39965	576 aa	Known RBP	4.04	□□□□□ -1.76
LSM12	YHR121W	RPS0B	P46654	252 aa	Known RBP	4.04	□□□□□ -1.76
LSM12	YHR121W	DLD2	P46681	530 aa	Known RBP	4.04	□□□□□ -1.76
LSM12	YHR121W	SSN2	P38931	1420 aa		4.04	□□□□□ -1.76
LSM12	YHR121W	CLN1	P20437	546 aa		4.03	□□□□□ -1.76
LSM12	YHR121W	ROX1	P25042	368 aa		4.03	□□□□□ -1.76
LSM12	YHR121W	MDE1	P47095	244 aa		4.03	□□□□□ -1.76
LSM12	YHR121W	APJ1	P53940	528 aa		4.03	□□□□□ -1.76
LSM12	YHR121W	RRP45	Q05636	305 aa	Known RBP	4.03	□□□□□ -1.76
LSM12	YHR121W	YDL012C	Q12489	107 aa		4.03	□□□□□ -1.76
LSM12	YHR121W	PDR12	Q02785	1511 aa		4.03	□□□□□ -1.76
LSM12	YHR121W	PDR11	P40550	1411 aa		4.03	□□□□□ -1.76
LSM12	YHR121W	TY1B-DR3	Q99231	1755 aa		4.02	□□□□□ -1.77
LSM12	YHR121W	VTH1	P40438	1549 aa		4.02	□□□□□ -1.77
LSM12	YHR121W	VTH2	P40890	1549 aa		4.02	□□□□□ -1.77
LSM12	YHR121W	CTR86	P25355	563 aa		4.02	□□□□□ -1.77
LSM12	YHR121W	KRE2	P27809	442 aa		4.02	□□□□□ -1.77
LSM12	YHR121W	CSE2	P33308	149 aa		4.02	□□□□□ -1.77
LSM12	YHR121W	BCH1	Q05029	724 aa		4.02	□□□□□ -1.77
LSM12	YHR121W	ILV5	P06168	395 aa	Known RBP	4.01	□□□□□ -1.77
LSM12	YHR121W	JLP2	P40206	208 aa		4.01	□□□□□ -1.77
LSM12	YHR121W	MTQ1	P53944	314 aa		4.01	□□□□□ -1.77
LSM12	YHR121W	RPA49	Q01080	415 aa	Predicted RBP	4.01	□□□□□ -1.77
LSM12	YHR121W	ADA2	Q02336	434 aa		4.01	□□□□□ -1.77
LSM12	YHR121W	SRV2	P17555	526 aa	Known RBP	4	□□□□□ -1.77
LSM12	YHR121W	CLB3	P24870	427 aa		4	□□□□□ -1.77
LSM12	YHR121W	RHB1	P25378	209 aa		4	□□□□□ -1.77
LSM12	YHR121W	BEM1	P29366	551 aa		4	□□□□□ -1.77
LSM12	YHR121W	NTC20	P38302	140 aa	Predicted RBP	4	□□□□□ -1.77
LSM12	YHR121W	SFH5	P47008	294 aa		4	□□□□□ -1.77
LSM12	YHR121W	YJR085C	P47131	105 aa	Known RBP	4	□□□□□ -1.77
LSM12	YHR121W	MRPL19	P53875	158 aa		4	□□□□□ -1.77
LSM12	YHR121W	GPI15	P53961	229 aa		4	□□□□□ -1.77
LSM12	YHR121W	TAF12	Q03761	539 aa		4	□□□□□ -1.77
LSM12	YHR121W	PLP2	Q12017	286 aa		4	□□□□□ -1.77
LSM12	YHR121W	VAM3	Q12241	283 aa		4	□□□□□ -1.77
LSM12	YHR121W	IZH2	Q12442	317 aa		4	□□□□□ -1.77
LSM12	YHR121W	SMY1	P32364	656 aa	Known RBP	3.99	□□□□□ -1.77
LSM12	YHR121W	DFG10	P40526	253 aa		3.99	□□□□□ -1.77
LSM12	YHR121W	PHB2	P50085	310 aa		3.99	□□□□□ -1.77
LSM12	YHR121W	MDM30	Q05930	598 aa		3.99	□□□□□ -1.77
LSM12	YHR121W	JID1	Q12350	301 aa		3.99	□□□□□ -1.77
LSM12	YHR121W	RTN2	Q12443	393 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms