RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeastyeast

Gene SLX9, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX9YGR081C SMY1P32364 656 aaKnown RBP2.58□□□□□ -2
SLX9YGR081C HIR2P32480 875 aa2.58□□□□□ -2
SLX9YGR081C SWE1P32944 819 aa2.58□□□□□ -2
SLX9YGR081C UTH1P36135 365 aa2.58□□□□□ -2
SLX9YGR081C PCF11P39081 626 aaPredicted RBP2.58□□□□□ -2
SLX9YGR081C YAL037WP39728 267 aa2.58□□□□□ -2
SLX9YGR081C COS5P47187 383 aa2.58□□□□□ -2
SLX9YGR081C HAL1Q01766 294 aa2.58□□□□□ -2
SLX9YGR081C GIP3Q03016 1276 aa2.58□□□□□ -2
SLX9YGR081C TSR2Q06672 205 aaKnown RBP2.58□□□□□ -2
SLX9YGR081C COS7Q07788 383 aa2.58□□□□□ -2
SLX9YGR081C IRC25Q07951 179 aa2.58□□□□□ -2
SLX9YGR081C SRL2Q12020 392 aa2.58□□□□□ -2
SLX9YGR081C ISN1Q99312 450 aa2.58□□□□□ -2
SLX9YGR081C PAN1P32521 1480 aa2.58□□□□□ -2
SLX9YGR081C UFD4P33202 1483 aa2.58□□□□□ -2
SLX9YGR081C MRPL10P36520 322 aa2.57□□□□□ -2
SLX9YGR081C YHR131CP38835 850 aa2.57□□□□□ -2
SLX9YGR081C GAB1P41733 394 aa2.57□□□□□ -2
SLX9YGR081C PHB2P50085 310 aa2.57□□□□□ -2
SLX9YGR081C RHO5P53879 331 aaKnown RBP2.57□□□□□ -2
SLX9YGR081C BCH1Q05029 724 aa2.57□□□□□ -2
SLX9YGR081C HSP42Q12329 375 aa2.57□□□□□ -2
SLX9YGR081C AHC1Q12433 566 aa2.57□□□□□ -2
SLX9YGR081C CDC31P06704 161 aaKnown RBP2.56□□□□□ -2
SLX9YGR081C RPN12P32496 274 aa2.56□□□□□ -2
SLX9YGR081C YME2P32843 850 aa2.56□□□□□ -2
SLX9YGR081C NFU1P32860 256 aa2.56□□□□□ -2
SLX9YGR081C CSE2P33308 149 aa2.56□□□□□ -2
SLX9YGR081C UTP18P40362 594 aaPredicted RBP2.56□□□□□ -2
SLX9YGR081C PHO86P46956 311 aa2.56□□□□□ -2
SLX9YGR081C COG4Q06096 861 aa2.56□□□□□ -2
SLX9YGR081C CUE5Q08412 411 aaKnown RBP2.56□□□□□ -2
SLX9YGR081C YRM1Q12340 786 aa2.56□□□□□ -2
SLX9YGR081C YRF1-4O13559 1382 aa2.56□□□□□ -2
SLX9YGR081C NUP170P38181 1502 aa2.56□□□□□ -2
SLX9YGR081C SPO7P18410 259 aa2.55□□□□□ -2
SLX9YGR081C NUP2P32499 720 aa2.55□□□□□ -2
SLX9YGR081C NPL6P32832 435 aa2.55□□□□□ -2
SLX9YGR081C TOR1P35169 2470 aa2.55□□□□□ -2
SLX9YGR081C MRP21P38175 177 aa2.55□□□□□ -2
SLX9YGR081C NTC20P38302 140 aaPredicted RBP2.55□□□□□ -2
SLX9YGR081C AIM10P39965 576 aaKnown RBP2.55□□□□□ -2
SLX9YGR081C GPD2P41911 440 aaKnown RBP2.55□□□□□ -2
SLX9YGR081C SFH5P47008 294 aa2.55□□□□□ -2
SLX9YGR081C YJR085CP47131 105 aaKnown RBP2.55□□□□□ -2
SLX9YGR081C YGL138CP53122 345 aa2.55□□□□□ -2
SLX9YGR081C YGR250CP53316 781 aaKnown RBP2.55□□□□□ -2
SLX9YGR081C OAZ1Q02803 292 aa2.55□□□□□ -2
SLX9YGR081C PDR10P51533 1564 aa2.54□□□□□ -2
SLX9YGR081C CUP1-1P0CX80 61 aa2.54□□□□□ -2
SLX9YGR081C CUP1-2P0CX81 61 aa2.54□□□□□ -2
SLX9YGR081C HSP26P15992 214 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SLX9YGR081C NIP1P32497 812 aaKnown RBP2.54□□□□□ -2
SLX9YGR081C LSM5P40089 93 aaKnown RBP2.54□□□□□ -2
SLX9YGR081C MDE1P47095 244 aa2.54□□□□□ -2
SLX9YGR081C SKO1Q02100 647 aa2.54□□□□□ -2
SLX9YGR081C YLR287CQ05881 355 aa2.54□□□□□ -2
SLX9YGR081C PLP2Q12017 286 aa2.54□□□□□ -2
SLX9YGR081C SCM3Q12334 223 aa2.54□□□□□ -2
SLX9YGR081C SNU66Q12420 587 aaPredicted RBP2.54□□□□□ -2
SLX9YGR081C YDL012CQ12489 107 aa2.54□□□□□ -2
SLX9YGR081C IMA3P0CW40 589 aa2.53□□□□□ -2
SLX9YGR081C IMA4P0CW41 589 aa2.53□□□□□ -2
SLX9YGR081C CLN1P20437 546 aa2.53□□□□□ -2
SLX9YGR081C RRN10P38204 145 aa2.53□□□□□ -2
SLX9YGR081C RRP4P38792 359 aaKnown RBP2.53□□□□□ -2
SLX9YGR081C SUB1P54000 292 aaKnown RBP2.53□□□□□ -2
SLX9YGR081C MDM1Q01846 1127 aa2.53□□□□□ -2
SLX9YGR081C KAP120Q02932 1032 aa2.53□□□□□ -2
SLX9YGR081C DIS3Q08162 1001 aaKnown RBP2.53□□□□□ -2
SLX9YGR081C IMA2Q08295 589 aa2.53□□□□□ -2
SLX9YGR081C IZH2Q12442 317 aa2.53□□□□□ -2
SLX9YGR081C DOP1Q03921 1698 aa2.53□□□□□ -2
SLX9YGR081C NAM2P11325 894 aa2.52□□□□□ -2.01
SLX9YGR081C URA4P20051 364 aa2.52□□□□□ -2.01
SLX9YGR081C SBE22P38814 852 aa2.52□□□□□ -2.01
SLX9YGR081C SIM1P40472 476 aa2.52□□□□□ -2.01
SLX9YGR081C NUP116Q02630 1113 aa2.52□□□□□ -2.01
SLX9YGR081C YMR155WQ03795 547 aa2.52□□□□□ -2.01
SLX9YGR081C URH1Q04179 340 aa2.52□□□□□ -2.01
SLX9YGR081C DON1Q05610 365 aa2.52□□□□□ -2.01
SLX9YGR081C SNT309Q06091 175 aaPredicted RBP2.52□□□□□ -2.01
SLX9YGR081C RAX1Q08760 435 aa2.52□□□□□ -2.01
SLX9YGR081C ATG34Q12292 412 aa2.52□□□□□ -2.01
SLX9YGR081C SFI1Q12369 946 aa2.52□□□□□ -2.01
SLX9YGR081C NUP159P40477 1460 aa2.52□□□□□ -2.01
SLX9YGR081C YOR1P53049 1477 aa2.52□□□□□ -2.01
SLX9YGR081C TRM3Q07527 1436 aa2.51□□□□□ -2.01
SLX9YGR081C TY1B-AO13527 1196 aaKnown RBP2.51□□□□□ -2.01
SLX9YGR081C YCR051WP25631 222 aa2.51□□□□□ -2.01
SLX9YGR081C CHK1P38147 527 aa2.51□□□□□ -2.01
SLX9YGR081C MIG3P39943 394 aa2.51□□□□□ -2.01
SLX9YGR081C MTQ1P53944 314 aa2.51□□□□□ -2.01
SLX9YGR081C OCA2P53949 197 aa2.51□□□□□ -2.01
SLX9YGR081C ROY1Q04847 553 aa2.51□□□□□ -2.01
SLX9YGR081C TPT1Q12272 230 aaKnown RBP2.51□□□□□ -2.01
SLX9YGR081C DNF3Q12674 1656 aa2.5□□□□□ -2.01
SLX9YGR081C COX3P00420 269 aa2.5□□□□□ -2.01
SLX9YGR081C ADE4P04046 510 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms