Protein–RNA interactions for Protein: P0CX80

CUP1-1, Copper metallothionein 1-1, yeastyeast

Predictions only

Length 61 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP1-1P0CX80 YML009W-BYML009W-B 477 nt18.82■□□□□ 0.6
CUP1-1P0CX80 NOP1YDL014W 984 nt18.72■□□□□ 0.59
CUP1-1P0CX80 YKL036CYKL036C 393 nt18.27■□□□□ 0.52
CUP1-1P0CX80 NSR1YGR159C 1245 nt17.77■□□□□ 0.44
CUP1-1P0CX80 YJL027CYJL027C 417 nt17.56■□□□□ 0.4
CUP1-1P0CX80 SCS3YGL126W 1143 nt17.19■□□□□ 0.34
CUP1-1P0CX80 Q0297Q0297 156 nt16.75■□□□□ 0.27
CUP1-1P0CX80 SCJ1YMR214W 1134 nt16.57■□□□□ 0.24
CUP1-1P0CX80 SRX1YKL086W 384 nt16.37■□□□□ 0.21
CUP1-1P0CX80 YOL085CYOL085C 342 nt15.78■□□□□ 0.12
CUP1-1P0CX80 ATS1YAL020C 1002 nt15.65■□□□□ 0.1
CUP1-1P0CX80 YCR051WYCR051W 669 nt15.59■□□□□ 0.09
CUP1-1P0CX80 PKP1YIL042C 1185 nt15.4■□□□□ 0.06
CUP1-1P0CX80 RPP1BYDL130W 321 nt15.02■□□□□ -0
CUP1-1P0CX80 RTC3YHR087W 336 nt14.98□□□□□ -0.01
CUP1-1P0CX80 MDJ1YFL016C 1536 nt14.8□□□□□ -0.04
CUP1-1P0CX80 SCR1SCR1 522 nt14.36□□□□□ -0.11
CUP1-1P0CX80 YKL097CYKL097C 411 nt14.32□□□□□ -0.12
CUP1-1P0CX80 PST2YDR032C 597 nt14.31□□□□□ -0.12
CUP1-1P0CX80 PET122YER153C 765 nt14.23□□□□□ -0.13
CUP1-1P0CX80 TRN1tP(UGG)A 72 nt14.2□□□□□ -0.14
CUP1-1P0CX80 SUF9tP(UGG)F 72 nt14.2□□□□□ -0.14
CUP1-1P0CX80 SUF8tP(UGG)H 72 nt14.2□□□□□ -0.14
CUP1-1P0CX80 tP(UGG)LtP(UGG)L 72 nt14.2□□□□□ -0.14
CUP1-1P0CX80 SUF7tP(UGG)M 72 nt14.2□□□□□ -0.14
CUP1-1P0CX80 tP(UGG)N1tP(UGG)N1 72 nt14.2□□□□□ -0.14
CUP1-1P0CX80 tP(UGG)N2tP(UGG)N2 72 nt14.2□□□□□ -0.14
CUP1-1P0CX80 tP(UGG)O1tP(UGG)O1 72 nt14.2□□□□□ -0.14
CUP1-1P0CX80 SUF11tP(UGG)O2 72 nt14.2□□□□□ -0.14
CUP1-1P0CX80 CCC1YLR220W 969 nt14□□□□□ -0.17
CUP1-1P0CX80 RSB1YOR049C 1065 nt13.95□□□□□ -0.18
CUP1-1P0CX80 RRN5YLR141W 1092 nt13.9□□□□□ -0.18
CUP1-1P0CX80 tP(UGG)O3tP(UGG)O3 72 nt13.76□□□□□ -0.21
CUP1-1P0CX80 YER088W-BYER088W-B 147 nt13.65□□□□□ -0.22
CUP1-1P0CX80 YOR139CYOR139C 393 nt13.55□□□□□ -0.24
CUP1-1P0CX80 DBP2YNL112W 1641 nt13.52□□□□□ -0.25
CUP1-1P0CX80 SHU1YHL006C 453 nt13.49□□□□□ -0.25
CUP1-1P0CX80 YDJ1YNL064C 1230 nt13.31□□□□□ -0.28
CUP1-1P0CX80 BSC6YOL137W 1494 nt13.3□□□□□ -0.28
CUP1-1P0CX80 NPL3YDR432W 1245 nt13.19□□□□□ -0.3
CUP1-1P0CX80 RVS167YDR388W 1449 nt12.96□□□□□ -0.34
CUP1-1P0CX80 tM(CAU)CtM(CAU)C 72 nt12.92□□□□□ -0.34
CUP1-1P0CX80 IMT4tM(CAU)E 72 nt12.92□□□□□ -0.34
CUP1-1P0CX80 IMT3tM(CAU)J3 72 nt12.92□□□□□ -0.34
CUP1-1P0CX80 IMT1tM(CAU)O1 72 nt12.92□□□□□ -0.34
CUP1-1P0CX80 IMT2tM(CAU)P 72 nt12.92□□□□□ -0.34
CUP1-1P0CX80 YAL037C-BYAL037C-B 975 nt12.91□□□□□ -0.34
CUP1-1P0CX80 MOT3YMR070W 1473 nt12.89□□□□□ -0.35
CUP1-1P0CX80 GAR1YHR089C 618 nt12.82□□□□□ -0.36
CUP1-1P0CX80 MRPL8YJL063C 717 nt12.79□□□□□ -0.36
CUP1-1P0CX80 UBX6YJL048C 1191 nt12.77□□□□□ -0.37
CUP1-1P0CX80 SHR5YOL110W 714 nt12.77□□□□□ -0.37
CUP1-1P0CX80 YOL037CYOL037C 354 nt12.62□□□□□ -0.39
CUP1-1P0CX80 RPN10YHR200W 807 nt12.6□□□□□ -0.39
CUP1-1P0CX80 ADO1YJR105W 1023 nt12.46□□□□□ -0.41
CUP1-1P0CX80 PUS2YGL063W 1113 nt12.4□□□□□ -0.42
CUP1-1P0CX80 MNP1YGL068W 585 nt12.38□□□□□ -0.43
CUP1-1P0CX80 YFL015W-AYFL015W-A 318 nt12.37□□□□□ -0.43
CUP1-1P0CX80 TIR1YER011W 765 nt12.36□□□□□ -0.43
CUP1-1P0CX80 YBR190WYBR190W 312 nt12.33□□□□□ -0.44
CUP1-1P0CX80 HOM6YJR139C 1080 nt12.28□□□□□ -0.44
CUP1-1P0CX80 YGR021WYGR021W 873 nt12.27□□□□□ -0.45
CUP1-1P0CX80 YEL076C-AYEL076C-A 651 nt12.25□□□□□ -0.45
CUP1-1P0CX80 YEL076CYEL076C 651 nt12.25□□□□□ -0.45
CUP1-1P0CX80 YLR464WYLR464W 651 nt12.25□□□□□ -0.45
CUP1-1P0CX80 YLR281CYLR281C 468 nt12.21□□□□□ -0.45
CUP1-1P0CX80 SBA1YKL117W 651 nt12.16□□□□□ -0.46
CUP1-1P0CX80 FMP45YDL222C 930 nt12.12□□□□□ -0.47
CUP1-1P0CX80 URN1YPR152C 1398 nt12.1□□□□□ -0.47
CUP1-1P0CX80 YDR094WYDR094W 336 nt12.1□□□□□ -0.47
CUP1-1P0CX80 RKM5YLR137W 1104 nt12.1□□□□□ -0.47
CUP1-1P0CX80 YCH1YGR203W 447 nt12.09□□□□□ -0.47
CUP1-1P0CX80 DEP1YAL013W 1218 nt12.01□□□□□ -0.49
CUP1-1P0CX80 SRB2YHR041C 633 nt12□□□□□ -0.49
CUP1-1P0CX80 WHI5YOR083W 888 nt11.99□□□□□ -0.49
CUP1-1P0CX80 SSA1YAL005C 1929 nt11.98□□□□□ -0.49
CUP1-1P0CX80 WWM1YFL010C 636 nt11.98□□□□□ -0.49
CUP1-1P0CX80 RTG1YOL067C 534 nt11.98□□□□□ -0.49
CUP1-1P0CX80 YNL208WYNL208W 600 nt11.97□□□□□ -0.49
CUP1-1P0CX80 SIS1YNL007C 1059 nt11.96□□□□□ -0.49
CUP1-1P0CX80 YPR011CYPR011C 981 nt11.91□□□□□ -0.5
CUP1-1P0CX80 DSK2YMR276W 1122 nt11.88□□□□□ -0.51
CUP1-1P0CX80 YJR018WYJR018W 363 nt11.87□□□□□ -0.51
CUP1-1P0CX80 YLR236CYLR236C 324 nt11.83□□□□□ -0.52
CUP1-1P0CX80 YFL021C-AYFL021C-A 855 nt11.8□□□□□ -0.52
CUP1-1P0CX80 IMP2'YIL154C 1041 nt11.75□□□□□ -0.53
CUP1-1P0CX80 SPP1YPL138C 1062 nt11.73□□□□□ -0.53
CUP1-1P0CX80 HUA1YGR268C 597 nt11.72□□□□□ -0.53
CUP1-1P0CX80 RPP2BYDR382W 333 nt11.66□□□□□ -0.54
CUP1-1P0CX80 LPX1YOR084W 1164 nt11.54□□□□□ -0.56
CUP1-1P0CX80 SSA3YBL075C 1950 nt11.51□□□□□ -0.57
CUP1-1P0CX80 ERV46YAL042W 1248 nt11.5□□□□□ -0.57
CUP1-1P0CX80 PAU16YKL224C 372 nt11.43□□□□□ -0.58
CUP1-1P0CX80 YJR120WYJR120W 351 nt11.35□□□□□ -0.59
CUP1-1P0CX80 OPI9YLR338W 858 nt11.35□□□□□ -0.59
CUP1-1P0CX80 LSM3YLR438C-A 270 nt11.33□□□□□ -0.6
CUP1-1P0CX80 FPR4YLR449W 1179 nt11.31□□□□□ -0.6
CUP1-1P0CX80 BDH2YAL061W 1254 nt11.29□□□□□ -0.6
CUP1-1P0CX80 YLR154C-GYLR154C-G 150 nt11.28□□□□□ -0.6
CUP1-1P0CX80 YHR049C-AYHR049C-A 297 nt11.23□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms