RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W JNM1P36224 373 aa3.05□□□□□ -1.92
VPS38YLR360W YGL138CP53122 345 aa3.05□□□□□ -1.92
VPS38YLR360W MDG1P53885 366 aa3.05□□□□□ -1.92
VPS38YLR360W HER2Q03557 464 aa3.05□□□□□ -1.92
VPS38YLR360W BET5Q03630 159 aa3.05□□□□□ -1.92
VPS38YLR360W ARX1Q03862 593 aaKnown RBP3.05□□□□□ -1.92
VPS38YLR360W RRG1Q12167 365 aaPredicted RBP3.05□□□□□ -1.92
VPS38YLR360W VAM3Q12241 283 aa3.05□□□□□ -1.92
VPS38YLR360W ORT1Q12375 292 aa3.05□□□□□ -1.92
VPS38YLR360W PGA3Q12746 312 aaKnown RBP3.05□□□□□ -1.92
VPS38YLR360W SPO7P18410 259 aa3.04□□□□□ -1.92
VPS38YLR360W REC107P21651 314 aa3.04□□□□□ -1.92
VPS38YLR360W LSB5P25369 354 aa3.04□□□□□ -1.92
VPS38YLR360W CDC60P26637 1090 aaKnown RBP3.04□□□□□ -1.92
VPS38YLR360W RFC3P38629 340 aa3.04□□□□□ -1.92
VPS38YLR360W PAN6P40459 309 aa3.04□□□□□ -1.92
VPS38YLR360W COS5P47187 383 aa3.04□□□□□ -1.92
VPS38YLR360W PHB2P50085 310 aa3.04□□□□□ -1.92
VPS38YLR360W COS7Q07788 383 aa3.04□□□□□ -1.92
VPS38YLR360W SGT1Q08446 395 aa3.04□□□□□ -1.92
VPS38YLR360W SFI1Q12369 946 aa3.04□□□□□ -1.92
VPS38YLR360W TRP1P00912 224 aa3.03□□□□□ -1.92
VPS38YLR360W CLN1P20437 546 aa3.03□□□□□ -1.92
VPS38YLR360W ISY1P21374 235 aaPredicted RBP3.03□□□□□ -1.92
VPS38YLR360W RVS161P25343 265 aaKnown RBP3.03□□□□□ -1.92
VPS38YLR360W KRE2P27809 442 aa3.03□□□□□ -1.92
VPS38YLR360W MUD1P32605 298 aaKnown RBP3.03□□□□□ -1.92
VPS38YLR360W YME2P32843 850 aa3.03□□□□□ -1.92
VPS38YLR360W KKQ8P36004 724 aa3.03□□□□□ -1.92
VPS38YLR360W YBR137WP38276 179 aa3.03□□□□□ -1.92
VPS38YLR360W SSU1P41930 458 aa3.03□□□□□ -1.92
VPS38YLR360W SRB7P47822 140 aa3.03□□□□□ -1.92
VPS38YLR360W CWC25P53854 179 aaKnown RBP3.03□□□□□ -1.92
VPS38YLR360W MDM30Q05930 598 aa3.03□□□□□ -1.92
VPS38YLR360W RPS8AP0CX39 200 aaKnown RBP3.02□□□□□ -1.93
VPS38YLR360W RPS8BP0CX40 200 aaKnown RBP3.02□□□□□ -1.93
VPS38YLR360W SNT1P25357 1226 aa3.02□□□□□ -1.93
VPS38YLR360W HIR2P32480 875 aa3.02□□□□□ -1.93
VPS38YLR360W SOR1P35497 357 aaKnown RBP3.02□□□□□ -1.93
VPS38YLR360W BYE1P36106 594 aa3.02□□□□□ -1.93
VPS38YLR360W MTM1P53320 366 aa3.02□□□□□ -1.93
VPS38YLR360W PEX25Q02969 394 aa3.02□□□□□ -1.93
VPS38YLR360W RSN1Q03516 953 aa3.02□□□□□ -1.93
VPS38YLR360W SOR2Q07786 357 aa3.02□□□□□ -1.93
VPS38YLR360W SCM3Q12334 223 aa3.02□□□□□ -1.93
VPS38YLR360W ILV5P06168 395 aaKnown RBP3.01□□□□□ -1.93
VPS38YLR360W NPL6P32832 435 aa3.01□□□□□ -1.93
VPS38YLR360W MSG5P38590 489 aa3.01□□□□□ -1.93
VPS38YLR360W NOC2P39744 710 aaKnown RBP3.01□□□□□ -1.93
VPS38YLR360W AZR1P50080 613 aa3.01□□□□□ -1.93
VPS38YLR360W MHR1Q06630 226 aa3.01□□□□□ -1.93
VPS38YLR360W DIS3Q08162 1001 aaKnown RBP3.01□□□□□ -1.93
VPS38YLR360W SKI7Q08491 747 aaPredicted RBP3.01□□□□□ -1.93
VPS38YLR360W RBD2Q12270 262 aa3.01□□□□□ -1.93
VPS38YLR360W NFT1P0CE68 1218 aa3□□□□□ -1.93
VPS38YLR360W CTR86P25355 563 aa3□□□□□ -1.93
VPS38YLR360W YCR051WP25631 222 aa3□□□□□ -1.93
VPS38YLR360W MMS4P38257 691 aa3□□□□□ -1.93
VPS38YLR360W TIS11P47977 285 aa3□□□□□ -1.93
VPS38YLR360W SKO1Q02100 647 aa3□□□□□ -1.93
VPS38YLR360W KAP120Q02932 1032 aa3□□□□□ -1.93
VPS38YLR360W ROY1Q04847 553 aa3□□□□□ -1.93
VPS38YLR360W RKM1Q08961 583 aaPredicted RBP3□□□□□ -1.93
VPS38YLR360W YRM1Q12340 786 aa3□□□□□ -1.93
VPS38YLR360W RMD5Q12508 421 aa3□□□□□ -1.93
VPS38YLR360W SMY1P32364 656 aaKnown RBP2.99□□□□□ -1.93
VPS38YLR360W NFU1P32860 256 aa2.99□□□□□ -1.93
VPS38YLR360W MRPL10P36520 322 aa2.99□□□□□ -1.93
VPS38YLR360W APE3P37302 537 aaKnown RBP2.99□□□□□ -1.93
VPS38YLR360W RRT2P38332 387 aa2.99□□□□□ -1.93
VPS38YLR360W YGL039WP53183 348 aaKnown RBP2.99□□□□□ -1.93
VPS38YLR360W GPI15P53961 229 aa2.99□□□□□ -1.93
VPS38YLR360W OAZ1Q02803 292 aa2.99□□□□□ -1.93
VPS38YLR360W GIP3Q03016 1276 aa2.99□□□□□ -1.93
VPS38YLR360W DON1Q05610 365 aa2.99□□□□□ -1.93
VPS38YLR360W WTM1Q12363 437 aaKnown RBP2.99□□□□□ -1.93
VPS38YLR360W AFI1Q99222 893 aa2.99□□□□□ -1.93
VPS38YLR360W CYC3P06182 269 aa2.98□□□□□ -1.93
VPS38YLR360W SPO12P17123 173 aa2.98□□□□□ -1.93
VPS38YLR360W URA4P20051 364 aa2.98□□□□□ -1.93
VPS38YLR360W POP5P28005 173 aa2.98□□□□□ -1.93
VPS38YLR360W PCF11P39081 626 aaPredicted RBP2.98□□□□□ -1.93
VPS38YLR360W LSM5P40089 93 aaKnown RBP2.98□□□□□ -1.93
VPS38YLR360W PHO86P46956 311 aa2.98□□□□□ -1.93
VPS38YLR360W YLR152CP54072 576 aa2.98□□□□□ -1.93
VPS38YLR360W ISN1Q99312 450 aa2.98□□□□□ -1.93
VPS38YLR360W TY1B-AO13527 1196 aaKnown RBP2.97□□□□□ -1.93
VPS38YLR360W SCEIP03882 235 aa2.97□□□□□ -1.93
VPS38YLR360W GEX1P25596 615 aa2.97□□□□□ -1.93
VPS38YLR360W BRF1P29056 596 aa2.97□□□□□ -1.93
VPS38YLR360W TFB1P32776 642 aa2.97□□□□□ -1.93
VPS38YLR360W RRN10P38204 145 aa2.97□□□□□ -1.93
VPS38YLR360W DED81P38707 554 aaKnown RBP2.97□□□□□ -1.93
VPS38YLR360W RRP4P38792 359 aaKnown RBP2.97□□□□□ -1.93
VPS38YLR360W YHR131CP38835 850 aa2.97□□□□□ -1.93
VPS38YLR360W SHY1P53266 389 aa2.97□□□□□ -1.93
VPS38YLR360W YGR250CP53316 781 aaKnown RBP2.97□□□□□ -1.93
VPS38YLR360W RHO5P53879 331 aaKnown RBP2.97□□□□□ -1.93
VPS38YLR360W BNI5P53890 448 aaKnown RBP2.97□□□□□ -1.93
VPS38YLR360W TAF12Q03761 539 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms