RNA–Protein interactions for RNA: YGL087C

MMS2, Transcript of Ubiquitin-conjugating enzyme variant, yeast

Gene MMS2, Length 414 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS2	YGL087C	YCR100C	P25606	316 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	BEM1	P29366	551 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	APE3	P37302	537 aa	Known RBP	4.94	□□□□□ -1.62
MMS2	YGL087C	RRT2	P38332	387 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	YHR054C	P38780	354 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	GCD10	P41814	478 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	ZIM17	P42844	174 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	ECM27	P47144	725 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	RPT4	P53549	437 aa	Known RBP	4.94	□□□□□ -1.62
MMS2	YGL087C	CIK1	Q01649	594 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	ACL4	Q03771	387 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	MDM30	Q05930	598 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	TIP41	Q12199	356 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	CTF3	Q12748	733 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	YBR298C-A	Q8TGK4	73 aa		4.94	□□□□□ -1.62
MMS2	YGL087C	URA4	P20051	364 aa		4.93	□□□□□ -1.62
MMS2	YGL087C	MCK1	P21965	375 aa	Known RBP	4.93	□□□□□ -1.62
MMS2	YGL087C	RHB1	P25378	209 aa		4.93	□□□□□ -1.62
MMS2	YGL087C	BRF1	P29056	596 aa		4.93	□□□□□ -1.62
MMS2	YGL087C	APE2	P32454	952 aa	Known RBP	4.93	□□□□□ -1.62
MMS2	YGL087C	SLM4	P38247	162 aa		4.93	□□□□□ -1.62
MMS2	YGL087C	MMS4	P38257	691 aa		4.93	□□□□□ -1.62
MMS2	YGL087C	SCS3	P53012	380 aa		4.93	□□□□□ -1.62
MMS2	YGL087C	YIP1	P53039	248 aa		4.93	□□□□□ -1.62
MMS2	YGL087C	ART5	P53244	586 aa	Known RBP	4.93	□□□□□ -1.62
MMS2	YGL087C	VPS9	P54787	451 aa		4.93	□□□□□ -1.62
MMS2	YGL087C	YMR130W	Q04223	302 aa		4.93	□□□□□ -1.62
MMS2	YGL087C	SCEI	P03882	235 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	HEM2	P05373	342 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	HIP1	P06775	603 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	HOM3	P10869	527 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	CLN1	P20437	546 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	RPI1	P23250	407 aa	Known RBP	4.92	□□□□□ -1.62
MMS2	YGL087C	GLC7	P32598	312 aa	Known RBP	4.92	□□□□□ -1.62
MMS2	YGL087C	PEX5	P35056	612 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	YCR041W	P37265	110 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
MMS2	YGL087C	RRT5	P43607	289 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	AVT4	P50944	713 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	RSC1	P53236	928 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	PCP1	P53259	346 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	CAF40	P53829	373 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	YIF1	P53845	314 aa	Known RBP	4.92	□□□□□ -1.62
MMS2	YGL087C	MMR1	Q06324	491 aa		4.92	□□□□□ -1.62
MMS2	YGL087C	GDH1	P07262	454 aa	Known RBP	4.91	□□□□□ -1.62
MMS2	YGL087C	RNA14	P25298	677 aa	Known RBP	4.91	□□□□□ -1.62
MMS2	YGL087C	SSN8	P47821	323 aa		4.91	□□□□□ -1.62
MMS2	YGL087C	TOM22	P49334	152 aa		4.91	□□□□□ -1.62
MMS2	YGL087C	POP6	P53218	158 aa		4.91	□□□□□ -1.62
MMS2	YGL087C	PIR3	Q03180	325 aa		4.91	□□□□□ -1.62
MMS2	YGL087C	DCS1	Q06151	350 aa		4.91	□□□□□ -1.62
MMS2	YGL087C	YMR230W-A	Q3E7B5	62 aa		4.91	□□□□□ -1.62
MMS2	YGL087C	LRP1	P38801	184 aa	Known RBP	4.9	□□□□□ -1.63
MMS2	YGL087C	MRP51	Q02950	344 aa		4.9	□□□□□ -1.63
MMS2	YGL087C	DIS3	Q08162	1001 aa	Known RBP	4.9	□□□□□ -1.63
MMS2	YGL087C	SGT1	Q08446	395 aa		4.9	□□□□□ -1.63
MMS2	YGL087C	SPO7	P18410	259 aa		4.89	□□□□□ -1.63
MMS2	YGL087C	IDP2	P41939	412 aa		4.89	□□□□□ -1.63
MMS2	YGL087C	TAF12	Q03761	539 aa		4.89	□□□□□ -1.63
MMS2	YGL087C	MUM3	Q08750	479 aa		4.89	□□□□□ -1.63
MMS2	YGL087C	VPS54	Q12071	889 aa		4.89	□□□□□ -1.63
MMS2	YGL087C	PHO2	P07269	559 aa		4.88	□□□□□ -1.63
MMS2	YGL087C	NIP1	P32497	812 aa	Known RBP	4.88	□□□□□ -1.63
MMS2	YGL087C	SOR1	P35497	357 aa	Known RBP	4.88	□□□□□ -1.63
MMS2	YGL087C	YJL132W	P47014	750 aa		4.88	□□□□□ -1.63
MMS2	YGL087C	YGR111W	P53265	400 aa		4.88	□□□□□ -1.63
MMS2	YGL087C	MSO1	P53604	210 aa	Known RBP	4.88	□□□□□ -1.63
MMS2	YGL087C	RTT103	Q05543	409 aa		4.88	□□□□□ -1.63
MMS2	YGL087C	SOR2	Q07786	357 aa		4.88	□□□□□ -1.63
MMS2	YGL087C	REX4	Q08237	289 aa		4.88	□□□□□ -1.63
MMS2	YGL087C	BUG1	Q12191	341 aa		4.88	□□□□□ -1.63
MMS2	YGL087C	MTR10	Q99189	972 aa		4.88	□□□□□ -1.63
MMS2	YGL087C	TIP1	P27654	210 aa	Predicted RBP	4.87	□□□□□ -1.63
MMS2	YGL087C	AGA1	P32323	725 aa		4.87	□□□□□ -1.63
MMS2	YGL087C	SMY1	P32364	656 aa	Known RBP	4.87	□□□□□ -1.63
MMS2	YGL087C	LTV1	P34078	463 aa		4.87	□□□□□ -1.63
MMS2	YGL087C	RRN10	P38204	145 aa		4.87	□□□□□ -1.63
MMS2	YGL087C	YBP1	P38315	674 aa		4.87	□□□□□ -1.63
MMS2	YGL087C	LYS1	P38998	373 aa	RIP-Chip data	4.87	□□□□□ -1.63	not detected
MMS2	YGL087C	SXM1	Q04175	944 aa	Known RBP	4.87	□□□□□ -1.63
MMS2	YGL087C	YPL199C	Q08954	240 aa		4.87	□□□□□ -1.63
MMS2	YGL087C	PRP16	P15938	1071 aa	Predicted RBP	4.86	□□□□□ -1.63
MMS2	YGL087C	CTR86	P25355	563 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	MST28	P39552	234 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	YAL037W	P39728	267 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	VHS2	P40463	436 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	PHO86	P46956	311 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	HMS2	P47175	358 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	YNR048W	P53740	393 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	IBD2	P53892	351 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	SKI7	Q08491	747 aa	Predicted RBP	4.86	□□□□□ -1.63
MMS2	YGL087C	TIM18	Q08749	192 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	AEP3	Q12089	606 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	YPR022C	Q12139	1133 aa		4.86	□□□□□ -1.63
MMS2	YGL087C	PKH2	Q12236	1081 aa	Known RBP	4.86	□□□□□ -1.63
MMS2	YGL087C	TY1B-A	O13527	1196 aa	Known RBP	4.85	□□□□□ -1.63
MMS2	YGL087C	ARG4	P04076	463 aa	Predicted RBP	4.85	□□□□□ -1.63
MMS2	YGL087C	LSB5	P25369	354 aa		4.85	□□□□□ -1.63
MMS2	YGL087C	TIF5	P38431	405 aa	Known RBP	4.85	□□□□□ -1.63
MMS2	YGL087C	SER3	P40054	469 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms