RNA–Protein interactions for RNA: YGL087C

MMS2, Transcript of Ubiquitin-conjugating enzyme variant, yeastyeast

Gene MMS2, Length 414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MMS2YGL087C DRS1P32892 752 aaKnown RBP16.66■□□□□ 0.26
MMS2YGL087C MTC1P47018 478 aaKnown RBP16.47■□□□□ 0.23
MMS2YGL087C BFR2Q06631 534 aaKnown RBP14.49□□□□□ -0.09
MMS2YGL087C DIP2Q12220 943 aaPredicted RBP14.14□□□□□ -0.15
MMS2YGL087C AVT3P36062 692 aa14.02□□□□□ -0.17
MMS2YGL087C TFA1P36100 482 aa13.78□□□□□ -0.2
MMS2YGL087C ISW2Q08773 1120 aa13.37□□□□□ -0.27
MMS2YGL087C RSE1Q04693 1361 aaKnown RBP13.32□□□□□ -0.28
MMS2YGL087C FAP1P53971 965 aa13.27□□□□□ -0.29
MMS2YGL087C RPG1P38249 964 aaKnown RBP13.15□□□□□ -0.3
MMS2YGL087C PRI1P10363 409 aa13.14□□□□□ -0.31
MMS2YGL087C AAD16Q02895 342 aa12.89□□□□□ -0.35
MMS2YGL087C RPL17AP05740 184 aaKnown RBP12.79□□□□□ -0.36
MMS2YGL087C RPL17BP46990 184 aaKnown RBP12.79□□□□□ -0.36
MMS2YGL087C REB1P21538 810 aa12.62□□□□□ -0.39
MMS2YGL087C TSR3Q12094 313 aaKnown RBP12.44□□□□□ -0.42
MMS2YGL087C PRY3P47033 881 aa12.41□□□□□ -0.42
MMS2YGL087C SPT21P35209 758 aa12.36□□□□□ -0.43
MMS2YGL087C RIM101P33400 625 aa12.23□□□□□ -0.45
MMS2YGL087C MRPL32P25348 183 aa12□□□□□ -0.49
MMS2YGL087C YKR023WP36119 530 aaKnown RBP11.91□□□□□ -0.5
MMS2YGL087C RQC2Q12532 1038 aaKnown RBP11.89□□□□□ -0.51
MMS2YGL087C PTP3P40048 928 aa11.84□□□□□ -0.51
MMS2YGL087C OXP1P28273 1286 aa11.83□□□□□ -0.52
MMS2YGL087C HAA1Q12753 694 aaKnown RBP11.8□□□□□ -0.52
MMS2YGL087C SSP1P38871 571 aa11.75□□□□□ -0.53
MMS2YGL087C YCK3P39962 524 aa11.75□□□□□ -0.53
MMS2YGL087C YIL055CP40523 627 aaKnown RBP11.68□□□□□ -0.54
MMS2YGL087C TFC8Q12308 588 aa11.68□□□□□ -0.54
MMS2YGL087C HOP09932 586 aa11.63□□□□□ -0.55
MMS2YGL087C YAH1Q12184 172 aaKnown RBP11.63□□□□□ -0.55
MMS2YGL087C CDC27P38042 758 aa11.59□□□□□ -0.55
MMS2YGL087C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.58□□□□□ -0.56not detected
MMS2YGL087C YLR271WQ06152 274 aa11.53□□□□□ -0.56
MMS2YGL087C DCD1P06773 312 aa11.5□□□□□ -0.57
MMS2YGL087C RSM7P47150 247 aa11.5□□□□□ -0.57
MMS2YGL087C DMA1P38823 416 aa11.35□□□□□ -0.59
MMS2YGL087C MGA2P40578 1113 aa11.34□□□□□ -0.59
MMS2YGL087C BCH2P36122 765 aa11.33□□□□□ -0.6
MMS2YGL087C AI2P03876 854 aa11.28□□□□□ -0.6
MMS2YGL087C PSD2P53037 1138 aaKnown RBP11.24□□□□□ -0.61
MMS2YGL087C BBC1P47068 1157 aa11.23□□□□□ -0.61
MMS2YGL087C UBP10P53874 792 aaPredicted RBP11.18□□□□□ -0.62
MMS2YGL087C CST9Q06032 482 aa11.17□□□□□ -0.62
MMS2YGL087C YGL015CP33199 130 aa11.16□□□□□ -0.62
MMS2YGL087C EPS1P40557 701 aa11.15□□□□□ -0.62
MMS2YGL087C SCY1P53009 804 aa11.1□□□□□ -0.63
MMS2YGL087C MAP2P38174 421 aaKnown RBP11.09□□□□□ -0.63
MMS2YGL087C BDF1P35817 686 aa11.07□□□□□ -0.64
MMS2YGL087C MRM1P25270 412 aa10.93□□□□□ -0.66
MMS2YGL087C SLX5P32828 619 aaKnown RBP10.92□□□□□ -0.66
MMS2YGL087C RTG3P38165 486 aa10.82□□□□□ -0.68
MMS2YGL087C RAM2P29703 316 aa10.81□□□□□ -0.68
MMS2YGL087C SAS10Q12136 610 aaPredicted RBP10.78□□□□□ -0.68
MMS2YGL087C RCR1P38212 213 aa10.76□□□□□ -0.69
MMS2YGL087C TIF4632P39936 914 aaKnown RBP10.7□□□□□ -0.7
MMS2YGL087C VPS29P38759 282 aa10.68□□□□□ -0.7
MMS2YGL087C MAK11P20484 414 aaKnown RBP10.67□□□□□ -0.7
MMS2YGL087C SET1P38827 1080 aaKnown RBP10.63□□□□□ -0.71
MMS2YGL087C TGL3P40308 642 aa10.63□□□□□ -0.71
MMS2YGL087C YMR1P47147 688 aaKnown RBP RIP-Chip data10.61□□□□□ -0.71not detected
MMS2YGL087C NSR1P27476 414 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
MMS2YGL087C IFH1P39520 1085 aa10.56□□□□□ -0.72
MMS2YGL087C YPR148CQ06523 435 aa10.53□□□□□ -0.72
MMS2YGL087C STS1P38637 319 aa10.52□□□□□ -0.73
MMS2YGL087C YOR238WQ08634 303 aa10.52□□□□□ -0.73
MMS2YGL087C DBP1P24784 617 aaKnown RBP10.51□□□□□ -0.73
MMS2YGL087C YAP5P40574 245 aa10.5□□□□□ -0.73
MMS2YGL087C COQ8P27697 501 aa10.49□□□□□ -0.73
MMS2YGL087C NOP53Q12080 455 aaKnown RBP10.49□□□□□ -0.73
MMS2YGL087C LEU3P08638 886 aa10.48□□□□□ -0.73
MMS2YGL087C CKB1P43639 278 aa10.45□□□□□ -0.74
MMS2YGL087C LEO1P38439 464 aa10.44□□□□□ -0.74
MMS2YGL087C YFR006WP43590 535 aa10.44□□□□□ -0.74
MMS2YGL087C VPS70P47161 811 aa10.43□□□□□ -0.74
MMS2YGL087C MIF2P35201 549 aa10.41□□□□□ -0.74
MMS2YGL087C EDS1P38073 919 aa10.38□□□□□ -0.75
MMS2YGL087C MST1P07236 462 aa10.35□□□□□ -0.75
MMS2YGL087C PIB1Q06651 286 aa10.33□□□□□ -0.76
MMS2YGL087C VMA1P17255 1071 aaKnown RBP10.32□□□□□ -0.76
MMS2YGL087C PTC3P34221 468 aaKnown RBP10.31□□□□□ -0.76
MMS2YGL087C SPB4P25808 606 aaPredicted RBP10.29□□□□□ -0.76
MMS2YGL087C SAM3Q08986 587 aa10.24□□□□□ -0.77
MMS2YGL087C DSF2P38213 736 aa10.22□□□□□ -0.77
MMS2YGL087C PBS2P08018 668 aa10.21□□□□□ -0.77
MMS2YGL087C GTT3P39996 337 aa10.21□□□□□ -0.77
MMS2YGL087C REF2P42073 533 aaPredicted RBP10.21□□□□□ -0.77
MMS2YGL087C GRE2Q12068 342 aaKnown RBP10.19□□□□□ -0.78
MMS2YGL087C RPN1P38764 993 aaKnown RBP10.18□□□□□ -0.78
MMS2YGL087C ATH1P48016 1211 aa10.18□□□□□ -0.78
MMS2YGL087C GUT1P32190 709 aa10.17□□□□□ -0.78
MMS2YGL087C MAK21Q12176 1025 aaKnown RBP10.13□□□□□ -0.79
MMS2YGL087C GYP5Q12344 894 aa10.13□□□□□ -0.79
MMS2YGL087C ABP1P15891 592 aaKnown RBP10.11□□□□□ -0.79
MMS2YGL087C MAM3Q12296 706 aa10.09□□□□□ -0.79
MMS2YGL087C YOL036WQ08206 761 aa10.08□□□□□ -0.8
MMS2YGL087C COX6P00427 148 aa10.07□□□□□ -0.8
MMS2YGL087C MSB4Q12317 492 aa10.06□□□□□ -0.8
MMS2YGL087C YGR273CP53329 174 aa10.04□□□□□ -0.8
MMS2YGL087C TAF7Q05021 590 aa10.04□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms