Protein–RNA interactions for Protein: Q05543

RTT103, Regulator of Ty1 transposition protein 103, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTT103Q05543 NSR1YGR159C 1245 nt17.17■□□□□ 0.34
RTT103Q05543 YML009W-BYML009W-B 477 nt16.89■□□□□ 0.29
RTT103Q05543 NOP1YDL014W 984 nt16.27■□□□□ 0.2
RTT103Q05543 MDJ1YFL016C 1536 nt15.6■□□□□ 0.09
RTT103Q05543 YKL036CYKL036C 393 nt14.61□□□□□ -0.07
RTT103Q05543 YJL027CYJL027C 417 nt14.38□□□□□ -0.11
RTT103Q05543 SRX1YKL086W 384 nt14.21□□□□□ -0.13
RTT103Q05543 Q0297Q0297 156 nt14.1□□□□□ -0.15
RTT103Q05543 DBP2YNL112W 1641 nt13.65□□□□□ -0.22
RTT103Q05543 YBR190WYBR190W 312 nt13.44□□□□□ -0.26
RTT103Q05543 YCR051WYCR051W 669 nt13.43□□□□□ -0.26
RTT103Q05543 RTC3YHR087W 336 nt13.1□□□□□ -0.31
RTT103Q05543 TRN1tP(UGG)A 72 nt13.09□□□□□ -0.31
RTT103Q05543 SUF9tP(UGG)F 72 nt13.09□□□□□ -0.31
RTT103Q05543 SUF8tP(UGG)H 72 nt13.09□□□□□ -0.31
RTT103Q05543 tP(UGG)LtP(UGG)L 72 nt13.09□□□□□ -0.31
RTT103Q05543 SUF7tP(UGG)M 72 nt13.09□□□□□ -0.31
RTT103Q05543 tP(UGG)N1tP(UGG)N1 72 nt13.09□□□□□ -0.31
RTT103Q05543 tP(UGG)N2tP(UGG)N2 72 nt13.09□□□□□ -0.31
RTT103Q05543 tP(UGG)O1tP(UGG)O1 72 nt13.09□□□□□ -0.31
RTT103Q05543 SUF11tP(UGG)O2 72 nt13.09□□□□□ -0.31
RTT103Q05543 SCS3YGL126W 1143 nt13.07□□□□□ -0.32
RTT103Q05543 SSA3YBL075C 1950 nt13.06□□□□□ -0.32
RTT103Q05543 CCC1YLR220W 969 nt12.94□□□□□ -0.34
RTT103Q05543 RVS167YDR388W 1449 nt12.75□□□□□ -0.37
RTT103Q05543 YOL085CYOL085C 342 nt12.67□□□□□ -0.38
RTT103Q05543 RPP1BYDL130W 321 nt12.65□□□□□ -0.38
RTT103Q05543 SCJ1YMR214W 1134 nt12.58□□□□□ -0.4
RTT103Q05543 PUT4YOR348C 1884 nt12.52□□□□□ -0.41
RTT103Q05543 PKP1YIL042C 1185 nt12.51□□□□□ -0.41
RTT103Q05543 tP(UGG)O3tP(UGG)O3 72 nt12.24□□□□□ -0.45
RTT103Q05543 SHR5YOL110W 714 nt12.2□□□□□ -0.46
RTT103Q05543 ARE1YCR048W 1833 nt12.16□□□□□ -0.46
RTT103Q05543 PET122YER153C 765 nt12.12□□□□□ -0.47
RTT103Q05543 URN1YPR152C 1398 nt12.11□□□□□ -0.47
RTT103Q05543 POA1YBR022W 534 nt12.09□□□□□ -0.47
RTT103Q05543 SAH1YER043C 1350 nt12.05□□□□□ -0.48
RTT103Q05543 OPI9YLR338W 858 nt12.03□□□□□ -0.48
RTT103Q05543 YHR049C-AYHR049C-A 297 nt12□□□□□ -0.49
RTT103Q05543 DEP1YAL013W 1218 nt11.98□□□□□ -0.49
RTT103Q05543 BSC6YOL137W 1494 nt11.9□□□□□ -0.5
RTT103Q05543 SCR1SCR1 522 nt11.9□□□□□ -0.5
RTT103Q05543 RPN10YHR200W 807 nt11.86□□□□□ -0.51
RTT103Q05543 YDJ1YNL064C 1230 nt11.86□□□□□ -0.51
RTT103Q05543 YNL208WYNL208W 600 nt11.77□□□□□ -0.53
RTT103Q05543 SSA1YAL005C 1929 nt11.77□□□□□ -0.53
RTT103Q05543 RRN5YLR141W 1092 nt11.74□□□□□ -0.53
RTT103Q05543 BUD23YCR047C 828 nt11.69□□□□□ -0.54
RTT103Q05543 PUN1YLR414C 792 nt11.68□□□□□ -0.54
RTT103Q05543 SPT5YML010W 3192 nt11.67□□□□□ -0.54
RTT103Q05543 FPS1YLL043W 2010 nt11.65□□□□□ -0.54
RTT103Q05543 GAR1YHR089C 618 nt11.64□□□□□ -0.55
RTT103Q05543 PTC2YER089C 1395 nt11.61□□□□□ -0.55
RTT103Q05543 ATS1YAL020C 1002 nt11.58□□□□□ -0.56
RTT103Q05543 YJR018WYJR018W 363 nt11.54□□□□□ -0.56
RTT103Q05543 NAB2YGL122C 1578 nt11.52□□□□□ -0.57
RTT103Q05543 YER088W-BYER088W-B 147 nt11.5□□□□□ -0.57
RTT103Q05543 NVJ2YPR091C 2313 nt11.48□□□□□ -0.57
RTT103Q05543 SSA4YER103W 1929 nt11.45□□□□□ -0.58
RTT103Q05543 RSB1YOR049C 1065 nt11.36□□□□□ -0.59
RTT103Q05543 PAC11YDR488C 1602 nt11.34□□□□□ -0.59
RTT103Q05543 FIS1YIL065C 468 nt11.3□□□□□ -0.6
RTT103Q05543 DAL1YIR027C 1383 nt11.28□□□□□ -0.6
RTT103Q05543 TIR1YER011W 765 nt11.28□□□□□ -0.6
RTT103Q05543 YJR120WYJR120W 351 nt11.26□□□□□ -0.61
RTT103Q05543 FPR4YLR449W 1179 nt11.23□□□□□ -0.61
RTT103Q05543 MEP2YNL142W 1500 nt11.22□□□□□ -0.61
RTT103Q05543 RPP2BYDR382W 333 nt11.2□□□□□ -0.62
RTT103Q05543 INM2YDR287W 879 nt11.19□□□□□ -0.62
RTT103Q05543 PHO4YFR034C 939 nt11.17□□□□□ -0.62
RTT103Q05543 YPS1YLR120C 1710 nt11.11□□□□□ -0.63
RTT103Q05543 BDF1YLR399C 2061 nt11.05□□□□□ -0.64
RTT103Q05543 DCW1YKL046C 1350 nt11.03□□□□□ -0.64
RTT103Q05543 YHR165W-AYHR165W-A 312 nt11.01□□□□□ -0.65
RTT103Q05543 YBL100CYBL100C 315 nt11□□□□□ -0.65
RTT103Q05543 YDR095CYDR095C 411 nt10.97□□□□□ -0.65
RTT103Q05543 SRB2YHR041C 633 nt10.94□□□□□ -0.66
RTT103Q05543 TAT1YBR069C 1860 nt10.9□□□□□ -0.66
RTT103Q05543 BDH2YAL061W 1254 nt10.9□□□□□ -0.66
RTT103Q05543 EMI2YDR516C 1503 nt10.89□□□□□ -0.67
RTT103Q05543 YMR090WYMR090W 684 nt10.86□□□□□ -0.67
RTT103Q05543 FUN26YAL022C 1554 nt10.86□□□□□ -0.67
RTT103Q05543 YBR220CYBR220C 1683 nt10.82□□□□□ -0.68
RTT103Q05543 PST2YDR032C 597 nt10.8□□□□□ -0.68
RTT103Q05543 ALF1YNL148C 765 nt10.8□□□□□ -0.68
RTT103Q05543 TRM9YML014W 840 nt10.78□□□□□ -0.68
RTT103Q05543 RPP2AYOL039W 321 nt10.78□□□□□ -0.68
RTT103Q05543 YDL221WYDL221W 552 nt10.77□□□□□ -0.69
RTT103Q05543 PTP1YDL230W 1008 nt10.77□□□□□ -0.69
RTT103Q05543 CAC2YML102W 1407 nt10.75□□□□□ -0.69
RTT103Q05543 Q0182Q0182 405 nt10.74□□□□□ -0.69
RTT103Q05543 SDH1YKL148C 1923 nt10.72□□□□□ -0.69
RTT103Q05543 WWM1YFL010C 636 nt10.71□□□□□ -0.69
RTT103Q05543 LSM3YLR438C-A 270 nt10.69□□□□□ -0.7
RTT103Q05543 CCT6YDR188W 1641 nt10.69□□□□□ -0.7
RTT103Q05543 YJL225CYJL225C 5277 nt10.68□□□□□ -0.7
RTT103Q05543 SIS1YNL007C 1059 nt10.65□□□□□ -0.7
RTT103Q05543 SUF2tP(AGG)C 72 nt10.63□□□□□ -0.71
RTT103Q05543 SUF10tP(AGG)N 72 nt10.63□□□□□ -0.71
RTT103Q05543 SCC4YER147C 1875 nt10.59□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 8.9 ms