RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C YIF1P53845 314 aaKnown RBP4.34□□□□□ -1.71
SCL1YGL011C YBR298C-AQ8TGK4 73 aa4.34□□□□□ -1.71
SCL1YGL011C GDH1P07262 454 aaKnown RBP4.33□□□□□ -1.72
SCL1YGL011C ATR1P13090 542 aa4.33□□□□□ -1.72
SCL1YGL011C RHB1P25378 209 aa4.33□□□□□ -1.72
SCL1YGL011C YCR100CP25606 316 aa4.33□□□□□ -1.72
SCL1YGL011C YUR1P26725 428 aa4.33□□□□□ -1.72
SCL1YGL011C NDI1P32340 513 aa4.33□□□□□ -1.72
SCL1YGL011C ECM25P32525 599 aa4.33□□□□□ -1.72
SCL1YGL011C SLM4P38247 162 aa4.33□□□□□ -1.72
SCL1YGL011C RRT5P43607 289 aa4.33□□□□□ -1.72
SCL1YGL011C YIP1P53039 248 aa4.33□□□□□ -1.72
SCL1YGL011C ART5P53244 586 aaKnown RBP4.33□□□□□ -1.72
SCL1YGL011C OGG1P53397 376 aaPredicted RBP4.33□□□□□ -1.72
SCL1YGL011C PIR3Q03180 325 aa4.33□□□□□ -1.72
SCL1YGL011C ACL4Q03771 387 aa4.33□□□□□ -1.72
SCL1YGL011C MMR1Q06324 491 aa4.33□□□□□ -1.72
SCL1YGL011C DIS3Q08162 1001 aaKnown RBP4.33□□□□□ -1.72
SCL1YGL011C YAR066WP0CX18 203 aa4.32□□□□□ -1.72
SCL1YGL011C YHR214WP0CX19 203 aa4.32□□□□□ -1.72
SCL1YGL011C PRP16P15938 1071 aaPredicted RBP4.32□□□□□ -1.72
SCL1YGL011C GLC7P32598 312 aaKnown RBP4.32□□□□□ -1.72
SCL1YGL011C APE3P37302 537 aaKnown RBP4.32□□□□□ -1.72
SCL1YGL011C KRE9P39005 276 aa4.32□□□□□ -1.72
SCL1YGL011C POP6P53218 158 aa4.32□□□□□ -1.72
SCL1YGL011C PNG1Q02890 363 aa4.32□□□□□ -1.72
SCL1YGL011C RKM1Q08961 583 aaPredicted RBP4.32□□□□□ -1.72
SCL1YGL011C PPT2Q12036 173 aa4.32□□□□□ -1.72
SCL1YGL011C CLN1P20437 546 aa4.31□□□□□ -1.72
SCL1YGL011C CPR2P23285 205 aa4.31□□□□□ -1.72
SCL1YGL011C BRF1P29056 596 aa4.31□□□□□ -1.72
SCL1YGL011C PXA2P34230 853 aa4.31□□□□□ -1.72
SCL1YGL011C SOR1P35497 357 aaKnown RBP4.31□□□□□ -1.72
SCL1YGL011C YHR054CP38780 354 aa4.31□□□□□ -1.72
SCL1YGL011C YML6P51998 286 aa4.31□□□□□ -1.72
SCL1YGL011C ODC1Q03028 310 aa4.31□□□□□ -1.72
SCL1YGL011C YMR130WQ04223 302 aa4.31□□□□□ -1.72
SCL1YGL011C DCS1Q06151 350 aa4.31□□□□□ -1.72
SCL1YGL011C SOR2Q07786 357 aa4.31□□□□□ -1.72
SCL1YGL011C HSP42Q12329 375 aa4.31□□□□□ -1.72
SCL1YGL011C TY1B-AO13527 1196 aaKnown RBP4.3□□□□□ -1.72
SCL1YGL011C HIS4P00815 799 aaKnown RBP4.3□□□□□ -1.72
SCL1YGL011C HIP1P06775 603 aa4.3□□□□□ -1.72
SCL1YGL011C MDH1P17505 334 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SCL1YGL011C MMS4P38257 691 aa4.3□□□□□ -1.72
SCL1YGL011C YJR011CP47086 261 aaPredicted RBP4.3□□□□□ -1.72
SCL1YGL011C ECM27P47144 725 aa4.3□□□□□ -1.72
SCL1YGL011C OCA2P53949 197 aa4.3□□□□□ -1.72
SCL1YGL011C VPS54Q12071 889 aa4.3□□□□□ -1.72
SCL1YGL011C SAM1P10659 382 aaKnown RBP4.29□□□□□ -1.72
SCL1YGL011C SAM2P19358 384 aaKnown RBP4.29□□□□□ -1.72
SCL1YGL011C SER3P40054 469 aa4.29□□□□□ -1.72
SCL1YGL011C HOT1Q03213 719 aa4.29□□□□□ -1.72
SCL1YGL011C YPR022CQ12139 1133 aa4.29□□□□□ -1.72
SCL1YGL011C SCEIP03882 235 aa4.28□□□□□ -1.72
SCL1YGL011C ILV5P06168 395 aaKnown RBP4.28□□□□□ -1.72
SCL1YGL011C PHO2P07269 559 aa4.28□□□□□ -1.72
SCL1YGL011C CHS1P08004 1131 aa4.28□□□□□ -1.72
SCL1YGL011C CRM1P30822 1084 aaKnown RBP4.28□□□□□ -1.72
SCL1YGL011C CAF40P53829 373 aa4.28□□□□□ -1.72
SCL1YGL011C RTT103Q05543 409 aa4.28□□□□□ -1.72
SCL1YGL011C YTH1Q06102 208 aaPredicted RBP4.28□□□□□ -1.72
SCL1YGL011C LPD1P09624 499 aaKnown RBP4.27□□□□□ -1.73
SCL1YGL011C CPR1P14832 162 aaKnown RBP4.27□□□□□ -1.73
SCL1YGL011C RRP4P38792 359 aaKnown RBP4.27□□□□□ -1.73
SCL1YGL011C CIK1Q01649 594 aa4.27□□□□□ -1.73
SCL1YGL011C MRP51Q02950 344 aa4.27□□□□□ -1.73
SCL1YGL011C YPL199CQ08954 240 aa4.27□□□□□ -1.73
SCL1YGL011C GPM3Q12326 303 aa4.27□□□□□ -1.73
SCL1YGL011C YCL021W-AQ96VH3 125 aa4.27□□□□□ -1.73
SCL1YGL011C TIP1P27654 210 aaPredicted RBP4.26□□□□□ -1.73
SCL1YGL011C ITR1P30605 584 aa4.26□□□□□ -1.73
SCL1YGL011C RRN10P38204 145 aa4.26□□□□□ -1.73
SCL1YGL011C MKT1P40850 830 aaKnown RBP4.26□□□□□ -1.73
SCL1YGL011C IDP2P41939 412 aa4.26□□□□□ -1.73
SCL1YGL011C PHO86P46956 311 aa4.26□□□□□ -1.73
SCL1YGL011C HMS2P47175 358 aa4.26□□□□□ -1.73
SCL1YGL011C RPT4P53549 437 aaKnown RBP4.26□□□□□ -1.73
SCL1YGL011C MSO1P53604 210 aaKnown RBP4.26□□□□□ -1.73
SCL1YGL011C FRE4P53746 719 aa4.26□□□□□ -1.73
SCL1YGL011C GYL1Q04322 720 aa4.26□□□□□ -1.73
SCL1YGL011C HEL2Q05580 639 aaKnown RBP4.26□□□□□ -1.73
SCL1YGL011C THP3Q12049 470 aaKnown RBP4.26□□□□□ -1.73
SCL1YGL011C ORT1Q12375 292 aa4.26□□□□□ -1.73
SCL1YGL011C COX3P00420 269 aa4.25□□□□□ -1.73
SCL1YGL011C SPO7P18410 259 aa4.25□□□□□ -1.73
SCL1YGL011C CTR86P25355 563 aa4.25□□□□□ -1.73
SCL1YGL011C SMY1P32364 656 aaKnown RBP4.25□□□□□ -1.73
SCL1YGL011C MRP4P32902 394 aa4.25□□□□□ -1.73
SCL1YGL011C PCA1P38360 1216 aa4.25□□□□□ -1.73
SCL1YGL011C TIF5P38431 405 aaKnown RBP4.25□□□□□ -1.73
SCL1YGL011C YHR218WP38899 603 aa4.25□□□□□ -1.73
SCL1YGL011C LYS1P38998 373 aaRIP-Chip data4.25□□□□□ -1.73not detected
SCL1YGL011C MST28P39552 234 aa4.25□□□□□ -1.73
SCL1YGL011C LCB2P40970 561 aa4.25□□□□□ -1.73
SCL1YGL011C TOM22P49334 152 aa4.25□□□□□ -1.73
SCL1YGL011C YGR111WP53265 400 aa4.25□□□□□ -1.73
SCL1YGL011C GIP3Q03016 1276 aa4.25□□□□□ -1.73
SCL1YGL011C MUM3Q08750 479 aa4.25□□□□□ -1.73
SCL1YGL011C MTR10Q99189 972 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms