Protein–RNA interactions for Protein: Q06102

YTH1, mRNA 3'-end-processing protein YTH1, yeastyeast

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YTH1Q06102 YML009W-BYML009W-B 477 nt17.48■□□□□ 0.39
YTH1Q06102 NSR1YGR159C 1245 nt17.28■□□□□ 0.36
YTH1Q06102 NOP1YDL014W 984 nt17.06■□□□□ 0.32
YTH1Q06102 YKL036CYKL036C 393 nt15.87■□□□□ 0.13
YTH1Q06102 MDJ1YFL016C 1536 nt15.26■□□□□ 0.03
YTH1Q06102 Q0297Q0297 156 nt14.99□□□□□ -0.01
YTH1Q06102 SRX1YKL086W 384 nt14.91□□□□□ -0.02
YTH1Q06102 YJL027CYJL027C 417 nt14.83□□□□□ -0.04
YTH1Q06102 SCS3YGL126W 1143 nt14.5□□□□□ -0.09
YTH1Q06102 YCR051WYCR051W 669 nt14.15□□□□□ -0.14
YTH1Q06102 YOL085CYOL085C 342 nt13.75□□□□□ -0.21
YTH1Q06102 DBP2YNL112W 1641 nt13.6□□□□□ -0.23
YTH1Q06102 PKP1YIL042C 1185 nt13.51□□□□□ -0.25
YTH1Q06102 RPP1BYDL130W 321 nt13.44□□□□□ -0.26
YTH1Q06102 TRN1tP(UGG)A 72 nt13.39□□□□□ -0.27
YTH1Q06102 SUF9tP(UGG)F 72 nt13.39□□□□□ -0.27
YTH1Q06102 SUF8tP(UGG)H 72 nt13.39□□□□□ -0.27
YTH1Q06102 tP(UGG)LtP(UGG)L 72 nt13.39□□□□□ -0.27
YTH1Q06102 SUF7tP(UGG)M 72 nt13.39□□□□□ -0.27
YTH1Q06102 tP(UGG)N1tP(UGG)N1 72 nt13.39□□□□□ -0.27
YTH1Q06102 tP(UGG)N2tP(UGG)N2 72 nt13.39□□□□□ -0.27
YTH1Q06102 tP(UGG)O1tP(UGG)O1 72 nt13.39□□□□□ -0.27
YTH1Q06102 SUF11tP(UGG)O2 72 nt13.39□□□□□ -0.27
YTH1Q06102 CCC1YLR220W 969 nt13.26□□□□□ -0.29
YTH1Q06102 SCJ1YMR214W 1134 nt13.04□□□□□ -0.32
YTH1Q06102 ATS1YAL020C 1002 nt13.03□□□□□ -0.32
YTH1Q06102 YBR190WYBR190W 312 nt12.95□□□□□ -0.34
YTH1Q06102 PET122YER153C 765 nt12.82□□□□□ -0.36
YTH1Q06102 tP(UGG)O3tP(UGG)O3 72 nt12.73□□□□□ -0.37
YTH1Q06102 RVS167YDR388W 1449 nt12.72□□□□□ -0.37
YTH1Q06102 SCR1SCR1 522 nt12.72□□□□□ -0.37
YTH1Q06102 RTC3YHR087W 336 nt12.64□□□□□ -0.39
YTH1Q06102 RRN5YLR141W 1092 nt12.48□□□□□ -0.41
YTH1Q06102 SHR5YOL110W 714 nt12.32□□□□□ -0.44
YTH1Q06102 YDJ1YNL064C 1230 nt12.31□□□□□ -0.44
YTH1Q06102 YER088W-BYER088W-B 147 nt12.24□□□□□ -0.45
YTH1Q06102 RSB1YOR049C 1065 nt12.24□□□□□ -0.45
YTH1Q06102 PST2YDR032C 597 nt12.05□□□□□ -0.48
YTH1Q06102 GAR1YHR089C 618 nt12.01□□□□□ -0.49
YTH1Q06102 SSA3YBL075C 1950 nt11.92□□□□□ -0.5
YTH1Q06102 DEP1YAL013W 1218 nt11.91□□□□□ -0.5
YTH1Q06102 URN1YPR152C 1398 nt11.89□□□□□ -0.51
YTH1Q06102 PUT4YOR348C 1884 nt11.78□□□□□ -0.52
YTH1Q06102 YNL208WYNL208W 600 nt11.75□□□□□ -0.53
YTH1Q06102 RPN10YHR200W 807 nt11.73□□□□□ -0.53
YTH1Q06102 OPI9YLR338W 858 nt11.71□□□□□ -0.53
YTH1Q06102 SAH1YER043C 1350 nt11.63□□□□□ -0.55
YTH1Q06102 YKL097CYKL097C 411 nt11.62□□□□□ -0.55
YTH1Q06102 ARE1YCR048W 1833 nt11.6□□□□□ -0.55
YTH1Q06102 TIR1YER011W 765 nt11.6□□□□□ -0.55
YTH1Q06102 SHU1YHL006C 453 nt11.52□□□□□ -0.57
YTH1Q06102 SSA1YAL005C 1929 nt11.45□□□□□ -0.58
YTH1Q06102 YHR049C-AYHR049C-A 297 nt11.4□□□□□ -0.58
YTH1Q06102 POA1YBR022W 534 nt11.36□□□□□ -0.59
YTH1Q06102 SRB2YHR041C 633 nt11.35□□□□□ -0.59
YTH1Q06102 YJR018WYJR018W 363 nt11.35□□□□□ -0.59
YTH1Q06102 PUN1YLR414C 792 nt11.35□□□□□ -0.59
YTH1Q06102 YJR120WYJR120W 351 nt11.32□□□□□ -0.6
YTH1Q06102 YAL037C-BYAL037C-B 975 nt11.3□□□□□ -0.6
YTH1Q06102 PTC2YER089C 1395 nt11.2□□□□□ -0.62
YTH1Q06102 RPP2BYDR382W 333 nt11.15□□□□□ -0.62
YTH1Q06102 YOR139CYOR139C 393 nt11.14□□□□□ -0.63
YTH1Q06102 BSC6YOL137W 1494 nt11.13□□□□□ -0.63
YTH1Q06102 WWM1YFL010C 636 nt11.12□□□□□ -0.63
YTH1Q06102 YGR021WYGR021W 873 nt11.08□□□□□ -0.64
YTH1Q06102 BUD23YCR047C 828 nt11.07□□□□□ -0.64
YTH1Q06102 HOM6YJR139C 1080 nt11.06□□□□□ -0.64
YTH1Q06102 NAB2YGL122C 1578 nt11.03□□□□□ -0.64
YTH1Q06102 MNP1YGL068W 585 nt11.02□□□□□ -0.65
YTH1Q06102 NPL3YDR432W 1245 nt11.01□□□□□ -0.65
YTH1Q06102 FIS1YIL065C 468 nt11□□□□□ -0.65
YTH1Q06102 BDH2YAL061W 1254 nt10.96□□□□□ -0.65
YTH1Q06102 INM2YDR287W 879 nt10.94□□□□□ -0.66
YTH1Q06102 YFL021C-AYFL021C-A 855 nt10.93□□□□□ -0.66
YTH1Q06102 DAL1YIR027C 1383 nt10.92□□□□□ -0.66
YTH1Q06102 RKM5YLR137W 1104 nt10.9□□□□□ -0.66
YTH1Q06102 YOL037CYOL037C 354 nt10.89□□□□□ -0.67
YTH1Q06102 FPR4YLR449W 1179 nt10.87□□□□□ -0.67
YTH1Q06102 LSM3YLR438C-A 270 nt10.86□□□□□ -0.67
YTH1Q06102 PHO4YFR034C 939 nt10.85□□□□□ -0.67
YTH1Q06102 YBL100CYBL100C 315 nt10.84□□□□□ -0.67
YTH1Q06102 TRM9YML014W 840 nt10.74□□□□□ -0.69
YTH1Q06102 FUN26YAL022C 1554 nt10.73□□□□□ -0.69
YTH1Q06102 tM(CAU)CtM(CAU)C 72 nt10.72□□□□□ -0.69
YTH1Q06102 IMT4tM(CAU)E 72 nt10.72□□□□□ -0.69
YTH1Q06102 IMT3tM(CAU)J3 72 nt10.72□□□□□ -0.69
YTH1Q06102 IMT1tM(CAU)O1 72 nt10.72□□□□□ -0.69
YTH1Q06102 IMT2tM(CAU)P 72 nt10.72□□□□□ -0.69
YTH1Q06102 SPT5YML010W 3192 nt10.69□□□□□ -0.7
YTH1Q06102 YLR281CYLR281C 468 nt10.65□□□□□ -0.7
YTH1Q06102 CCT6YDR188W 1641 nt10.62□□□□□ -0.71
YTH1Q06102 YPS1YLR120C 1710 nt10.61□□□□□ -0.71
YTH1Q06102 WHI5YOR083W 888 nt10.59□□□□□ -0.71
YTH1Q06102 PUS2YGL063W 1113 nt10.58□□□□□ -0.72
YTH1Q06102 YDR095CYDR095C 411 nt10.57□□□□□ -0.72
YTH1Q06102 ALF1YNL148C 765 nt10.53□□□□□ -0.72
YTH1Q06102 SUF2tP(AGG)C 72 nt10.51□□□□□ -0.73
YTH1Q06102 SUF10tP(AGG)N 72 nt10.51□□□□□ -0.73
YTH1Q06102 YLR154C-GYLR154C-G 150 nt10.47□□□□□ -0.73
YTH1Q06102 MEP2YNL142W 1500 nt10.44□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms