Protein–RNA interactions for Protein: P17505

MDH1, Malate dehydrogenase, mitochondrial, yeastyeast

Known RBP RIP-Chip data

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MDH1P17505 NSR1YGR159C 1245 nt18.33■□□□□ 0.52
MDH1P17505 YML009W-BYML009W-B 477 nt18.06■□□□□ 0.48
MDH1P17505 NOP1YDL014W 984 nt17.33■□□□□ 0.36
MDH1P17505 MDJ1YFL016C 1536 nt16.78■□□□□ 0.28
MDH1P17505 YKL036CYKL036C 393 nt15.54■□□□□ 0.08
MDH1P17505 YJL027CYJL027C 417 nt15.44■□□□□ 0.06
MDH1P17505 SRX1YKL086W 384 nt15.14■□□□□ 0.01
MDH1P17505 Q0297Q0297 156 nt15□□□□□ -0.01
MDH1P17505 DBP2YNL112W 1641 nt14.61□□□□□ -0.07
MDH1P17505 YBR190WYBR190W 312 nt14.41□□□□□ -0.1
MDH1P17505 YCR051WYCR051W 669 nt14.34□□□□□ -0.11
MDH1P17505 RTC3YHR087W 336 nt14.09□□□□□ -0.15
MDH1P17505 TRN1tP(UGG)A 72 nt13.99□□□□□ -0.17
MDH1P17505 SUF9tP(UGG)F 72 nt13.99□□□□□ -0.17
MDH1P17505 SUF8tP(UGG)H 72 nt13.99□□□□□ -0.17
MDH1P17505 tP(UGG)LtP(UGG)L 72 nt13.99□□□□□ -0.17
MDH1P17505 SUF7tP(UGG)M 72 nt13.99□□□□□ -0.17
MDH1P17505 tP(UGG)N1tP(UGG)N1 72 nt13.99□□□□□ -0.17
MDH1P17505 tP(UGG)N2tP(UGG)N2 72 nt13.99□□□□□ -0.17
MDH1P17505 tP(UGG)O1tP(UGG)O1 72 nt13.99□□□□□ -0.17
MDH1P17505 SUF11tP(UGG)O2 72 nt13.99□□□□□ -0.17
MDH1P17505 SCS3YGL126W 1143 nt13.89□□□□□ -0.19
MDH1P17505 CCC1YLR220W 969 nt13.85□□□□□ -0.19
MDH1P17505 SSA3YBL075C 1950 nt13.74□□□□□ -0.21
MDH1P17505 RVS167YDR388W 1449 nt13.65□□□□□ -0.22
MDH1P17505 SCJ1YMR214W 1134 nt13.49□□□□□ -0.25
MDH1P17505 RPP1BYDL130W 321 nt13.47□□□□□ -0.25
MDH1P17505 YOL085CYOL085C 342 nt13.46□□□□□ -0.25
MDH1P17505 PUT4YOR348C 1884 nt13.45□□□□□ -0.26
MDH1P17505 PKP1YIL042C 1185 nt13.34□□□□□ -0.27
MDH1P17505 tP(UGG)O3tP(UGG)O3 72 nt13.07□□□□□ -0.32
MDH1P17505 ARE1YCR048W 1833 nt13.06□□□□□ -0.32
MDH1P17505 SHR5YOL110W 714 nt13.06□□□□□ -0.32
MDH1P17505 URN1YPR152C 1398 nt13□□□□□ -0.33
MDH1P17505 POA1YBR022W 534 nt13□□□□□ -0.33
MDH1P17505 SAH1YER043C 1350 nt12.95□□□□□ -0.34
MDH1P17505 PET122YER153C 765 nt12.94□□□□□ -0.34
MDH1P17505 YHR049C-AYHR049C-A 297 nt12.93□□□□□ -0.34
MDH1P17505 OPI9YLR338W 858 nt12.9□□□□□ -0.34
MDH1P17505 DEP1YAL013W 1218 nt12.86□□□□□ -0.35
MDH1P17505 BSC6YOL137W 1494 nt12.83□□□□□ -0.36
MDH1P17505 RPN10YHR200W 807 nt12.71□□□□□ -0.37
MDH1P17505 SCR1SCR1 522 nt12.67□□□□□ -0.38
MDH1P17505 YDJ1YNL064C 1230 nt12.64□□□□□ -0.39
MDH1P17505 YNL208WYNL208W 600 nt12.6□□□□□ -0.39
MDH1P17505 BUD23YCR047C 828 nt12.59□□□□□ -0.39
MDH1P17505 Q0182Q0182 405 nt12.58□□□□□ -0.4
MDH1P17505 PUN1YLR414C 792 nt12.54□□□□□ -0.4
MDH1P17505 SPT5YML010W 3192 nt12.51□□□□□ -0.41
MDH1P17505 RRN5YLR141W 1092 nt12.5□□□□□ -0.41
MDH1P17505 PTC2YER089C 1395 nt12.46□□□□□ -0.41
MDH1P17505 GAR1YHR089C 618 nt12.45□□□□□ -0.42
MDH1P17505 YJR018WYJR018W 363 nt12.37□□□□□ -0.43
MDH1P17505 SSA4YER103W 1929 nt12.36□□□□□ -0.43
MDH1P17505 NAB2YGL122C 1578 nt12.35□□□□□ -0.43
MDH1P17505 ATS1YAL020C 1002 nt12.26□□□□□ -0.45
MDH1P17505 YER088W-BYER088W-B 147 nt12.25□□□□□ -0.45
MDH1P17505 FIS1YIL065C 468 nt12.15□□□□□ -0.46
MDH1P17505 RSB1YOR049C 1065 nt12.12□□□□□ -0.47
MDH1P17505 DAL1YIR027C 1383 nt12.11□□□□□ -0.47
MDH1P17505 FPR4YLR449W 1179 nt12.09□□□□□ -0.47
MDH1P17505 MEP2YNL142W 1500 nt12.08□□□□□ -0.48
MDH1P17505 YJR120WYJR120W 351 nt12.07□□□□□ -0.48
MDH1P17505 TIR1YER011W 765 nt12.06□□□□□ -0.48
MDH1P17505 PHO4YFR034C 939 nt12.01□□□□□ -0.49
MDH1P17505 RPP2BYDR382W 333 nt12□□□□□ -0.49
MDH1P17505 SSA1YAL005C 1929 nt11.99□□□□□ -0.49
MDH1P17505 INM2YDR287W 879 nt11.98□□□□□ -0.49
MDH1P17505 YPS1YLR120C 1710 nt11.93□□□□□ -0.5
MDH1P17505 BDF1YLR399C 2061 nt11.9□□□□□ -0.51
MDH1P17505 DCW1YKL046C 1350 nt11.89□□□□□ -0.51
MDH1P17505 YHR165W-AYHR165W-A 312 nt11.86□□□□□ -0.51
MDH1P17505 MOT3YMR070W 1473 nt11.83□□□□□ -0.52
MDH1P17505 YBL100CYBL100C 315 nt11.81□□□□□ -0.52
MDH1P17505 YDR095CYDR095C 411 nt11.79□□□□□ -0.52
MDH1P17505 TAT1YBR069C 1860 nt11.74□□□□□ -0.53
MDH1P17505 EMI2YDR516C 1503 nt11.72□□□□□ -0.53
MDH1P17505 SRB2YHR041C 633 nt11.7□□□□□ -0.54
MDH1P17505 YMR090WYMR090W 684 nt11.69□□□□□ -0.54
MDH1P17505 BDH2YAL061W 1254 nt11.66□□□□□ -0.54
MDH1P17505 YBR220CYBR220C 1683 nt11.65□□□□□ -0.55
MDH1P17505 FUN26YAL022C 1554 nt11.64□□□□□ -0.55
MDH1P17505 ALF1YNL148C 765 nt11.6□□□□□ -0.55
MDH1P17505 YDL221WYDL221W 552 nt11.59□□□□□ -0.55
MDH1P17505 RPP2AYOL039W 321 nt11.57□□□□□ -0.56
MDH1P17505 CAC2YML102W 1407 nt11.56□□□□□ -0.56
MDH1P17505 PTP1YDL230W 1008 nt11.55□□□□□ -0.56
MDH1P17505 SDH1YKL148C 1923 nt11.53□□□□□ -0.56
MDH1P17505 TRM9YML014W 840 nt11.52□□□□□ -0.57
MDH1P17505 WWM1YFL010C 636 nt11.44□□□□□ -0.58
MDH1P17505 CCT6YDR188W 1641 nt11.43□□□□□ -0.58
MDH1P17505 PST2YDR032C 597 nt11.43□□□□□ -0.58
MDH1P17505 LSM3YLR438C-A 270 nt11.4□□□□□ -0.58
MDH1P17505 SCC4YER147C 1875 nt11.4□□□□□ -0.59
MDH1P17505 SIS1YNL007C 1059 nt11.39□□□□□ -0.59
MDH1P17505 IRC15YPL017C 1500 nt11.39□□□□□ -0.59
MDH1P17505 SUF2tP(AGG)C 72 nt11.38□□□□□ -0.59
MDH1P17505 SUF10tP(AGG)N 72 nt11.38□□□□□ -0.59
MDH1P17505 SEC11YIR022W 504 nt11.32□□□□□ -0.6
MDH1P17505 PCH2YBR186W 1695 nt11.32□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 10.3 ms