RNA–Protein interactions for RNA: YDR200C

VPS64, Transcript of Protein required for cytoplasm to vacuole targeting of proteins, yeast

Gene VPS64, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS64	YDR200C	ALG8	P40351	577 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	ATF1	P40353	525 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	ERR3	P42222	437 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	ASK10	P48361	1146 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	APM1	Q00776	475 aa	Predicted RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	PET117	Q02771	107 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	DIG1	Q03063	452 aa	Known RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	MTG1	Q03151	367 aa	Predicted RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	YDR109C	Q04585	715 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	RCO1	Q04779	684 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	IZH3	Q07959	543 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	YLR030W	Q07967	263 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	YOL024W	Q08172	172 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	IMA2	Q08295	589 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	HSH49	Q99181	213 aa	Predicted RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	CYR1	P08678	2026 aa	Known RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	FAS1	P07149	2051 aa	Known RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	RPN13	O13563	156 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	STE12	P13574	688 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	VPS34	P22543	875 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	EMP70	P32802	667 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	CNS1	P33313	385 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	SKN1	P33336	771 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	PEX5	P35056	612 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	KES1	P35844	434 aa	Known RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	YPT52	P36018	234 aa	Known RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	RPF2	P36160	344 aa	Known RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	MRP21	P38175	177 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	TRM7	P38238	310 aa	Known RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	MMS21	P38632	267 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	YEL073C	P39974	107 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	FAU1	P40099	211 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	YMR134W	P40207	237 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	LRO1	P40345	661 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	SLD3	P53135	668 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	COG6	P53959	839 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	SUR7	P54003	302 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	NGL2	Q03264	515 aa	Known RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	TRS31	Q03337	283 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	TRS23	Q03784	219 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	APL4	Q12028	832 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	DIN7	Q12086	430 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	LEU9	Q12166	604 aa	Known RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	FRE7	Q12333	620 aa		2.68	□□□□□ -1.98
VPS64	YDR200C	RRP12	Q12754	1228 aa	Known RBP	2.68	□□□□□ -1.98
VPS64	YDR200C	FUR1	P18562	216 aa	Known RBP	2.67	□□□□□ -1.98
VPS64	YDR200C	RPA135	P22138	1203 aa	Known RBP	2.67	□□□□□ -1.98
VPS64	YDR200C	RRP43	P25359	394 aa	Predicted RBP	2.67	□□□□□ -1.98
VPS64	YDR200C	LDB16	P25587	256 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	CUE2	P36075	443 aa	Known RBP	2.67	□□□□□ -1.98
VPS64	YDR200C	CDS1	P38221	457 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	EHT1	P38295	451 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	YHR045W	P38775	560 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	SMF2	P38778	549 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	LYS1	P38998	373 aa	RIP-Chip data	2.67	□□□□□ -1.98	not detected
VPS64	YDR200C	YEL020C	P39994	560 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	GIM4	P40005	111 aa	Known RBP	2.67	□□□□□ -1.98
VPS64	YDR200C	SCC4	P40090	624 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	CFD1	P40558	293 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	PET130	P47065	347 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	YGR054W	P53235	642 aa	Known RBP	2.67	□□□□□ -1.98
VPS64	YDR200C	PEX8	P53248	589 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	SNF12	P53628	566 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	RPL22B	P56628	122 aa	Known RBP	2.67	□□□□□ -1.98
VPS64	YDR200C	YDR179W-A	Q03983	463 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	HLR1	Q04429	423 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	PFA4	Q12006	378 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	LDB17	Q12342	491 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	LAG2	Q92325	660 aa		2.67	□□□□□ -1.98
VPS64	YDR200C	CDC24	P11433	854 aa	Predicted RBP	2.66	□□□□□ -1.98
VPS64	YDR200C	YCR006C	P25350	157 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	GID7	P25569	745 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	MRPL9	P31334	269 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	PET309	P32522	965 aa	Predicted RBP	2.66	□□□□□ -1.98
VPS64	YDR200C	TIP20	P33891	701 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	TOM20	P35180	183 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	YBP1	P38315	674 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	POP4	P38336	279 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	MSG5	P38590	489 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	RIX1	P38883	763 aa	Predicted RBP	2.66	□□□□□ -1.98
VPS64	YDR200C	SEO1	P39709	593 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	EMP65	P40085	556 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	LSM5	P40089	93 aa	Known RBP	2.66	□□□□□ -1.98
VPS64	YDR200C	MEP1	P40260	492 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	SPG5	P42933	373 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	ALK1	P43633	760 aa	Known RBP	2.66	□□□□□ -1.98
VPS64	YDR200C	RPC17	P47076	161 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	YGR250C	P53316	781 aa	Known RBP	2.66	□□□□□ -1.98
VPS64	YDR200C	ARE2	P53629	642 aa	Known RBP	2.66	□□□□□ -1.98
VPS64	YDR200C	OSH6	Q02201	448 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	RPN9	Q04062	393 aa	Known RBP	2.66	□□□□□ -1.98
VPS64	YDR200C	HSP42	Q12329	375 aa		2.66	□□□□□ -1.98
VPS64	YDR200C	PHO5	P00635	467 aa		2.65	□□□□□ -1.98
VPS64	YDR200C	PRP2	P20095	876 aa	Predicted RBP	2.65	□□□□□ -1.98
VPS64	YDR200C	IMG1	P25626	169 aa		2.65	□□□□□ -1.98
VPS64	YDR200C	BUB3	P26449	341 aa		2.65	□□□□□ -1.98
VPS64	YDR200C	GDA1	P32621	518 aa		2.65	□□□□□ -1.98
VPS64	YDR200C	MTC7	P32633	139 aa		2.65	□□□□□ -1.98
VPS64	YDR200C	CYM1	P32898	989 aa		2.65	□□□□□ -1.98
VPS64	YDR200C	LTV1	P34078	463 aa		2.65	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 235.2 ms