Protein–RNA interactions for Protein: P38221

CDS1, Phosphatidate cytidylyltransferase, yeastyeast

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDS1P38221 NSR1YGR159C 1245 nt16.25■□□□□ 0.19
CDS1P38221 YML009W-BYML009W-B 477 nt16.14■□□□□ 0.17
CDS1P38221 NOP1YDL014W 984 nt15.68■□□□□ 0.1
CDS1P38221 MDJ1YFL016C 1536 nt14.63□□□□□ -0.07
CDS1P38221 YKL036CYKL036C 393 nt14.24□□□□□ -0.13
CDS1P38221 SSA3YBL075C 1950 nt14.05□□□□□ -0.16
CDS1P38221 SRX1YKL086W 384 nt13.66□□□□□ -0.22
CDS1P38221 Q0297Q0297 156 nt13.62□□□□□ -0.23
CDS1P38221 YJL027CYJL027C 417 nt13.48□□□□□ -0.25
CDS1P38221 YCR051WYCR051W 669 nt12.92□□□□□ -0.34
CDS1P38221 SCS3YGL126W 1143 nt12.82□□□□□ -0.36
CDS1P38221 DBP2YNL112W 1641 nt12.77□□□□□ -0.36
CDS1P38221 YBR190WYBR190W 312 nt12.57□□□□□ -0.4
CDS1P38221 Q0182Q0182 405 nt12.52□□□□□ -0.41
CDS1P38221 TRN1tP(UGG)A 72 nt12.46□□□□□ -0.41
CDS1P38221 SUF9tP(UGG)F 72 nt12.46□□□□□ -0.41
CDS1P38221 SUF8tP(UGG)H 72 nt12.46□□□□□ -0.41
CDS1P38221 tP(UGG)LtP(UGG)L 72 nt12.46□□□□□ -0.41
CDS1P38221 SUF7tP(UGG)M 72 nt12.46□□□□□ -0.41
CDS1P38221 tP(UGG)N1tP(UGG)N1 72 nt12.46□□□□□ -0.41
CDS1P38221 tP(UGG)N2tP(UGG)N2 72 nt12.46□□□□□ -0.41
CDS1P38221 tP(UGG)O1tP(UGG)O1 72 nt12.46□□□□□ -0.41
CDS1P38221 SUF11tP(UGG)O2 72 nt12.46□□□□□ -0.41
CDS1P38221 YOL085CYOL085C 342 nt12.31□□□□□ -0.44
CDS1P38221 CCC1YLR220W 969 nt12.29□□□□□ -0.44
CDS1P38221 RTC3YHR087W 336 nt12.27□□□□□ -0.45
CDS1P38221 RPP1BYDL130W 321 nt12.22□□□□□ -0.45
CDS1P38221 PUT4YOR348C 1884 nt12.11□□□□□ -0.47
CDS1P38221 PKP1YIL042C 1185 nt12.1□□□□□ -0.47
CDS1P38221 RVS167YDR388W 1449 nt12.08□□□□□ -0.48
CDS1P38221 MOT3YMR070W 1473 nt12.04□□□□□ -0.48
CDS1P38221 SSA4YER103W 1929 nt12.03□□□□□ -0.48
CDS1P38221 SPT5YML010W 3192 nt11.92□□□□□ -0.5
CDS1P38221 SCJ1YMR214W 1134 nt11.87□□□□□ -0.51
CDS1P38221 PAC11YDR488C 1602 nt11.86□□□□□ -0.51
CDS1P38221 BDF1YLR399C 2061 nt11.72□□□□□ -0.53
CDS1P38221 NVJ2YPR091C 2313 nt11.7□□□□□ -0.54
CDS1P38221 tP(UGG)O3tP(UGG)O3 72 nt11.7□□□□□ -0.54
CDS1P38221 PET122YER153C 765 nt11.66□□□□□ -0.54
CDS1P38221 POA1YBR022W 534 nt11.62□□□□□ -0.55
CDS1P38221 BSC6YOL137W 1494 nt11.58□□□□□ -0.56
CDS1P38221 SHR5YOL110W 714 nt11.58□□□□□ -0.56
CDS1P38221 SCR1SCR1 522 nt11.55□□□□□ -0.56
CDS1P38221 ARE1YCR048W 1833 nt11.55□□□□□ -0.56
CDS1P38221 TAT1YBR069C 1860 nt11.53□□□□□ -0.56
CDS1P38221 ATS1YAL020C 1002 nt11.41□□□□□ -0.58
CDS1P38221 YHR049C-AYHR049C-A 297 nt11.38□□□□□ -0.59
CDS1P38221 YDJ1YNL064C 1230 nt11.37□□□□□ -0.59
CDS1P38221 URN1YPR152C 1398 nt11.36□□□□□ -0.59
CDS1P38221 FPS1YLL043W 2010 nt11.3□□□□□ -0.6
CDS1P38221 RRN5YLR141W 1092 nt11.3□□□□□ -0.6
CDS1P38221 SAH1YER043C 1350 nt11.27□□□□□ -0.61
CDS1P38221 SSA1YAL005C 1929 nt11.27□□□□□ -0.61
CDS1P38221 OPI9YLR338W 858 nt11.26□□□□□ -0.61
CDS1P38221 DEP1YAL013W 1218 nt11.25□□□□□ -0.61
CDS1P38221 RPN10YHR200W 807 nt11.22□□□□□ -0.61
CDS1P38221 YNL208WYNL208W 600 nt11.12□□□□□ -0.63
CDS1P38221 GAR1YHR089C 618 nt11.09□□□□□ -0.63
CDS1P38221 YER088W-BYER088W-B 147 nt11.08□□□□□ -0.64
CDS1P38221 RSB1YOR049C 1065 nt11.03□□□□□ -0.64
CDS1P38221 BUD23YCR047C 828 nt11.02□□□□□ -0.65
CDS1P38221 MEP2YNL142W 1500 nt11.01□□□□□ -0.65
CDS1P38221 PUN1YLR414C 792 nt10.95□□□□□ -0.66
CDS1P38221 PTC2YER089C 1395 nt10.85□□□□□ -0.67
CDS1P38221 YJR018WYJR018W 363 nt10.83□□□□□ -0.68
CDS1P38221 UME6YDR207C 2511 nt10.82□□□□□ -0.68
CDS1P38221 YBR220CYBR220C 1683 nt10.81□□□□□ -0.68
CDS1P38221 NAB2YGL122C 1578 nt10.77□□□□□ -0.69
CDS1P38221 DCW1YKL046C 1350 nt10.77□□□□□ -0.69
CDS1P38221 TIR1YER011W 765 nt10.75□□□□□ -0.69
CDS1P38221 YJL225CYJL225C 5277 nt10.75□□□□□ -0.69
CDS1P38221 PCH2YBR186W 1695 nt10.74□□□□□ -0.69
CDS1P38221 GUT2YIL155C 1950 nt10.72□□□□□ -0.69
CDS1P38221 YMR090WYMR090W 684 nt10.69□□□□□ -0.7
CDS1P38221 SEC11YIR022W 504 nt10.63□□□□□ -0.71
CDS1P38221 EMI2YDR516C 1503 nt10.62□□□□□ -0.71
CDS1P38221 FIS1YIL065C 468 nt10.61□□□□□ -0.71
CDS1P38221 RPP2BYDR382W 333 nt10.6□□□□□ -0.71
CDS1P38221 PST2YDR032C 597 nt10.59□□□□□ -0.71
CDS1P38221 DAL1YIR027C 1383 nt10.56□□□□□ -0.72
CDS1P38221 YJR120WYJR120W 351 nt10.56□□□□□ -0.72
CDS1P38221 SDH1YKL148C 1923 nt10.54□□□□□ -0.72
CDS1P38221 FPR4YLR449W 1179 nt10.53□□□□□ -0.72
CDS1P38221 BOR1YNL275W 1731 nt10.53□□□□□ -0.72
CDS1P38221 PIB2YGL023C 1908 nt10.51□□□□□ -0.73
CDS1P38221 INM2YDR287W 879 nt10.5□□□□□ -0.73
CDS1P38221 PHO4YFR034C 939 nt10.47□□□□□ -0.73
CDS1P38221 YPS1YLR120C 1710 nt10.47□□□□□ -0.73
CDS1P38221 YDL221WYDL221W 552 nt10.45□□□□□ -0.74
CDS1P38221 YHR165W-AYHR165W-A 312 nt10.4□□□□□ -0.74
CDS1P38221 RTF1YGL244W 1677 nt10.34□□□□□ -0.75
CDS1P38221 SRB2YHR041C 633 nt10.34□□□□□ -0.75
CDS1P38221 YBL100CYBL100C 315 nt10.34□□□□□ -0.75
CDS1P38221 MCH5YOR306C 1566 nt10.33□□□□□ -0.76
CDS1P38221 BDH2YAL061W 1254 nt10.32□□□□□ -0.76
CDS1P38221 SCC4YER147C 1875 nt10.3□□□□□ -0.76
CDS1P38221 RDN37-1RDN37-1 5354 nt10.27□□□□□ -0.77
CDS1P38221 RDN37-2RDN37-2 5354 nt10.27□□□□□ -0.77
CDS1P38221 YDR095CYDR095C 411 nt10.27□□□□□ -0.77
CDS1P38221 WWM1YFL010C 636 nt10.21□□□□□ -0.77
Retrieved 100 of 7,029 protein–RNA pairs in 10.4 ms