Protein–RNA interactions for Protein: P40090

SCC4, MAU2 chromatid cohesion factor homolog, yeastyeast

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCC4P40090 NSR1YGR159C 1245 nt20.87■□□□□ 0.93
SCC4P40090 YML009W-BYML009W-B 477 nt20.85■□□□□ 0.93
SCC4P40090 NOP1YDL014W 984 nt20.18■□□□□ 0.82
SCC4P40090 MDJ1YFL016C 1536 nt18.74■□□□□ 0.59
SCC4P40090 YKL036CYKL036C 393 nt18.45■□□□□ 0.54
SCC4P40090 SRX1YKL086W 384 nt17.64■□□□□ 0.41
SCC4P40090 Q0297Q0297 156 nt17.6■□□□□ 0.41
SCC4P40090 YJL027CYJL027C 417 nt17.27■□□□□ 0.36
SCC4P40090 YCR051WYCR051W 669 nt16.72■□□□□ 0.27
SCC4P40090 SCS3YGL126W 1143 nt16.68■□□□□ 0.26
SCC4P40090 DBP2YNL112W 1641 nt16.48■□□□□ 0.23
SCC4P40090 TRN1tP(UGG)A 72 nt16.07■□□□□ 0.16
SCC4P40090 SUF9tP(UGG)F 72 nt16.07■□□□□ 0.16
SCC4P40090 SUF8tP(UGG)H 72 nt16.07■□□□□ 0.16
SCC4P40090 tP(UGG)LtP(UGG)L 72 nt16.07■□□□□ 0.16
SCC4P40090 SUF7tP(UGG)M 72 nt16.07■□□□□ 0.16
SCC4P40090 tP(UGG)N1tP(UGG)N1 72 nt16.07■□□□□ 0.16
SCC4P40090 tP(UGG)N2tP(UGG)N2 72 nt16.07■□□□□ 0.16
SCC4P40090 tP(UGG)O1tP(UGG)O1 72 nt16.07■□□□□ 0.16
SCC4P40090 SUF11tP(UGG)O2 72 nt16.07■□□□□ 0.16
SCC4P40090 YBR190WYBR190W 312 nt16.01■□□□□ 0.15
SCC4P40090 YOL085CYOL085C 342 nt15.98■□□□□ 0.15
SCC4P40090 CCC1YLR220W 969 nt15.89■□□□□ 0.13
SCC4P40090 RPP1BYDL130W 321 nt15.79■□□□□ 0.12
SCC4P40090 PKP1YIL042C 1185 nt15.76■□□□□ 0.11
SCC4P40090 RTC3YHR087W 336 nt15.65■□□□□ 0.1
SCC4P40090 RVS167YDR388W 1449 nt15.46■□□□□ 0.07
SCC4P40090 SCJ1YMR214W 1134 nt15.36■□□□□ 0.05
SCC4P40090 tP(UGG)O3tP(UGG)O3 72 nt15.13■□□□□ 0.01
SCC4P40090 PET122YER153C 765 nt15.12■□□□□ 0.01
SCC4P40090 SCR1SCR1 522 nt14.9□□□□□ -0.02
SCC4P40090 SHR5YOL110W 714 nt14.88□□□□□ -0.03
SCC4P40090 ATS1YAL020C 1002 nt14.86□□□□□ -0.03
SCC4P40090 PUT4YOR348C 1884 nt14.69□□□□□ -0.06
SCC4P40090 RRN5YLR141W 1092 nt14.66□□□□□ -0.06
SCC4P40090 YDJ1YNL064C 1230 nt14.64□□□□□ -0.07
SCC4P40090 URN1YPR152C 1398 nt14.59□□□□□ -0.07
SCC4P40090 DEP1YAL013W 1218 nt14.52□□□□□ -0.09
SCC4P40090 OPI9YLR338W 858 nt14.42□□□□□ -0.1
SCC4P40090 YER088W-BYER088W-B 147 nt14.37□□□□□ -0.11
SCC4P40090 ARE1YCR048W 1833 nt14.36□□□□□ -0.11
SCC4P40090 SAH1YER043C 1350 nt14.36□□□□□ -0.11
SCC4P40090 GAR1YHR089C 618 nt14.34□□□□□ -0.11
SCC4P40090 RPN10YHR200W 807 nt14.33□□□□□ -0.12
SCC4P40090 RSB1YOR049C 1065 nt14.3□□□□□ -0.12
SCC4P40090 YNL208WYNL208W 600 nt14.28□□□□□ -0.12
SCC4P40090 POA1YBR022W 534 nt14.22□□□□□ -0.13
SCC4P40090 YHR049C-AYHR049C-A 297 nt14.2□□□□□ -0.14
SCC4P40090 SSA3YBL075C 1950 nt14.12□□□□□ -0.15
SCC4P40090 PUN1YLR414C 792 nt14□□□□□ -0.17
SCC4P40090 BSC6YOL137W 1494 nt13.95□□□□□ -0.18
SCC4P40090 YJR018WYJR018W 363 nt13.9□□□□□ -0.18
SCC4P40090 TIR1YER011W 765 nt13.87□□□□□ -0.19
SCC4P40090 BUD23YCR047C 828 nt13.85□□□□□ -0.19
SCC4P40090 PTC2YER089C 1395 nt13.84□□□□□ -0.19
SCC4P40090 PST2YDR032C 597 nt13.79□□□□□ -0.2
SCC4P40090 SSA1YAL005C 1929 nt13.74□□□□□ -0.21
SCC4P40090 NAB2YGL122C 1578 nt13.7□□□□□ -0.22
SCC4P40090 YJR120WYJR120W 351 nt13.66□□□□□ -0.22
SCC4P40090 RPP2BYDR382W 333 nt13.57□□□□□ -0.24
SCC4P40090 FIS1YIL065C 468 nt13.5□□□□□ -0.25
SCC4P40090 SRB2YHR041C 633 nt13.49□□□□□ -0.25
SCC4P40090 DAL1YIR027C 1383 nt13.48□□□□□ -0.25
SCC4P40090 FPR4YLR449W 1179 nt13.45□□□□□ -0.26
SCC4P40090 INM2YDR287W 879 nt13.43□□□□□ -0.26
SCC4P40090 SPT5YML010W 3192 nt13.4□□□□□ -0.26
SCC4P40090 PHO4YFR034C 939 nt13.36□□□□□ -0.27
SCC4P40090 SHU1YHL006C 453 nt13.29□□□□□ -0.28
SCC4P40090 BDH2YAL061W 1254 nt13.27□□□□□ -0.29
SCC4P40090 YBL100CYBL100C 315 nt13.27□□□□□ -0.29
SCC4P40090 WWM1YFL010C 636 nt13.23□□□□□ -0.29
SCC4P40090 YPS1YLR120C 1710 nt13.16□□□□□ -0.3
SCC4P40090 YKL097CYKL097C 411 nt13.16□□□□□ -0.3
SCC4P40090 YAL037C-BYAL037C-B 975 nt13.14□□□□□ -0.31
SCC4P40090 MEP2YNL142W 1500 nt13.11□□□□□ -0.31
SCC4P40090 FUN26YAL022C 1554 nt13.11□□□□□ -0.31
SCC4P40090 YGR021WYGR021W 873 nt13.09□□□□□ -0.31
SCC4P40090 YDR095CYDR095C 411 nt13.07□□□□□ -0.32
SCC4P40090 LSM3YLR438C-A 270 nt13.06□□□□□ -0.32
SCC4P40090 YHR165W-AYHR165W-A 312 nt13.04□□□□□ -0.32
SCC4P40090 HOM6YJR139C 1080 nt13.04□□□□□ -0.32
SCC4P40090 TRM9YML014W 840 nt13.04□□□□□ -0.32
SCC4P40090 YFL021C-AYFL021C-A 855 nt13.03□□□□□ -0.32
SCC4P40090 SSA4YER103W 1929 nt13.01□□□□□ -0.33
SCC4P40090 MNP1YGL068W 585 nt12.96□□□□□ -0.33
SCC4P40090 ALF1YNL148C 765 nt12.96□□□□□ -0.33
SCC4P40090 CCT6YDR188W 1641 nt12.92□□□□□ -0.34
SCC4P40090 DCW1YKL046C 1350 nt12.9□□□□□ -0.34
SCC4P40090 RKM5YLR137W 1104 nt12.85□□□□□ -0.35
SCC4P40090 SUF2tP(AGG)C 72 nt12.83□□□□□ -0.36
SCC4P40090 SUF10tP(AGG)N 72 nt12.83□□□□□ -0.36
SCC4P40090 RPP2AYOL039W 321 nt12.81□□□□□ -0.36
SCC4P40090 PTP1YDL230W 1008 nt12.77□□□□□ -0.37
SCC4P40090 SIS1YNL007C 1059 nt12.77□□□□□ -0.37
SCC4P40090 EMI2YDR516C 1503 nt12.74□□□□□ -0.37
SCC4P40090 CAC2YML102W 1407 nt12.7□□□□□ -0.38
SCC4P40090 YOL037CYOL037C 354 nt12.67□□□□□ -0.38
SCC4P40090 YMR090WYMR090W 684 nt12.66□□□□□ -0.38
SCC4P40090 YOR139CYOR139C 393 nt12.66□□□□□ -0.38
SCC4P40090 YDL221WYDL221W 552 nt12.64□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms