Protein–RNA interactions for Protein: P38778

SMF2, Manganese transporter SMF2, yeastyeast

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMF2P38778 NSR1YGR159C 1245 nt20.76■□□□□ 0.91
SMF2P38778 YML009W-BYML009W-B 477 nt20.74■□□□□ 0.91
SMF2P38778 NOP1YDL014W 984 nt20.12■□□□□ 0.81
SMF2P38778 MDJ1YFL016C 1536 nt18.68■□□□□ 0.58
SMF2P38778 YKL036CYKL036C 393 nt18.43■□□□□ 0.54
SMF2P38778 SRX1YKL086W 384 nt17.59■□□□□ 0.41
SMF2P38778 Q0297Q0297 156 nt17.57■□□□□ 0.4
SMF2P38778 YJL027CYJL027C 417 nt17.19■□□□□ 0.34
SMF2P38778 SCS3YGL126W 1143 nt16.69■□□□□ 0.26
SMF2P38778 YCR051WYCR051W 669 nt16.66■□□□□ 0.26
SMF2P38778 DBP2YNL112W 1641 nt16.44■□□□□ 0.22
SMF2P38778 YBR190WYBR190W 312 nt15.99■□□□□ 0.15
SMF2P38778 TRN1tP(UGG)A 72 nt15.98■□□□□ 0.15
SMF2P38778 SUF9tP(UGG)F 72 nt15.98■□□□□ 0.15
SMF2P38778 SUF8tP(UGG)H 72 nt15.98■□□□□ 0.15
SMF2P38778 tP(UGG)LtP(UGG)L 72 nt15.98■□□□□ 0.15
SMF2P38778 SUF7tP(UGG)M 72 nt15.98■□□□□ 0.15
SMF2P38778 tP(UGG)N1tP(UGG)N1 72 nt15.98■□□□□ 0.15
SMF2P38778 tP(UGG)N2tP(UGG)N2 72 nt15.98■□□□□ 0.15
SMF2P38778 tP(UGG)O1tP(UGG)O1 72 nt15.98■□□□□ 0.15
SMF2P38778 SUF11tP(UGG)O2 72 nt15.98■□□□□ 0.15
SMF2P38778 YOL085CYOL085C 342 nt15.97■□□□□ 0.15
SMF2P38778 CCC1YLR220W 969 nt15.8■□□□□ 0.12
SMF2P38778 RPP1BYDL130W 321 nt15.77■□□□□ 0.12
SMF2P38778 PKP1YIL042C 1185 nt15.73■□□□□ 0.11
SMF2P38778 RTC3YHR087W 336 nt15.6■□□□□ 0.09
SMF2P38778 RVS167YDR388W 1449 nt15.34■□□□□ 0.05
SMF2P38778 SCJ1YMR214W 1134 nt15.24■□□□□ 0.03
SMF2P38778 PET122YER153C 765 nt15.07■□□□□ 0
SMF2P38778 tP(UGG)O3tP(UGG)O3 72 nt15.07■□□□□ 0
SMF2P38778 ATS1YAL020C 1002 nt14.9□□□□□ -0.02
SMF2P38778 SCR1SCR1 522 nt14.87□□□□□ -0.03
SMF2P38778 SHR5YOL110W 714 nt14.78□□□□□ -0.04
SMF2P38778 PUT4YOR348C 1884 nt14.78□□□□□ -0.04
SMF2P38778 RRN5YLR141W 1092 nt14.63□□□□□ -0.07
SMF2P38778 YDJ1YNL064C 1230 nt14.59□□□□□ -0.07
SMF2P38778 URN1YPR152C 1398 nt14.52□□□□□ -0.08
SMF2P38778 SSA3YBL075C 1950 nt14.49□□□□□ -0.09
SMF2P38778 DEP1YAL013W 1218 nt14.43□□□□□ -0.1
SMF2P38778 ARE1YCR048W 1833 nt14.42□□□□□ -0.1
SMF2P38778 OPI9YLR338W 858 nt14.37□□□□□ -0.11
SMF2P38778 SAH1YER043C 1350 nt14.36□□□□□ -0.11
SMF2P38778 YER088W-BYER088W-B 147 nt14.34□□□□□ -0.11
SMF2P38778 POA1YBR022W 534 nt14.28□□□□□ -0.12
SMF2P38778 GAR1YHR089C 618 nt14.27□□□□□ -0.13
SMF2P38778 RSB1YOR049C 1065 nt14.27□□□□□ -0.13
SMF2P38778 YHR049C-AYHR049C-A 297 nt14.21□□□□□ -0.13
SMF2P38778 RPN10YHR200W 807 nt14.21□□□□□ -0.13
SMF2P38778 YNL208WYNL208W 600 nt14.18□□□□□ -0.14
SMF2P38778 BSC6YOL137W 1494 nt14.03□□□□□ -0.16
SMF2P38778 PUN1YLR414C 792 nt13.93□□□□□ -0.18
SMF2P38778 BUD23YCR047C 828 nt13.85□□□□□ -0.19
SMF2P38778 PST2YDR032C 597 nt13.83□□□□□ -0.2
SMF2P38778 YJR018WYJR018W 363 nt13.83□□□□□ -0.2
SMF2P38778 PTC2YER089C 1395 nt13.83□□□□□ -0.2
SMF2P38778 TIR1YER011W 765 nt13.81□□□□□ -0.2
SMF2P38778 NAB2YGL122C 1578 nt13.68□□□□□ -0.22
SMF2P38778 SSA1YAL005C 1929 nt13.67□□□□□ -0.22
SMF2P38778 SPT5YML010W 3192 nt13.63□□□□□ -0.23
SMF2P38778 YJR120WYJR120W 351 nt13.6□□□□□ -0.23
SMF2P38778 FIS1YIL065C 468 nt13.48□□□□□ -0.25
SMF2P38778 RPP2BYDR382W 333 nt13.47□□□□□ -0.25
SMF2P38778 DAL1YIR027C 1383 nt13.44□□□□□ -0.26
SMF2P38778 SRB2YHR041C 633 nt13.41□□□□□ -0.26
SMF2P38778 FPR4YLR449W 1179 nt13.4□□□□□ -0.26
SMF2P38778 INM2YDR287W 879 nt13.37□□□□□ -0.27
SMF2P38778 PHO4YFR034C 939 nt13.33□□□□□ -0.28
SMF2P38778 SHU1YHL006C 453 nt13.29□□□□□ -0.28
SMF2P38778 SSA4YER103W 1929 nt13.25□□□□□ -0.29
SMF2P38778 MEP2YNL142W 1500 nt13.2□□□□□ -0.3
SMF2P38778 YKL097CYKL097C 411 nt13.19□□□□□ -0.3
SMF2P38778 BDH2YAL061W 1254 nt13.19□□□□□ -0.3
SMF2P38778 YBL100CYBL100C 315 nt13.19□□□□□ -0.3
SMF2P38778 YPS1YLR120C 1710 nt13.18□□□□□ -0.3
SMF2P38778 WWM1YFL010C 636 nt13.17□□□□□ -0.3
SMF2P38778 YAL037C-BYAL037C-B 975 nt13.13□□□□□ -0.31
SMF2P38778 YDR095CYDR095C 411 nt13.05□□□□□ -0.32
SMF2P38778 YGR021WYGR021W 873 nt13.05□□□□□ -0.32
SMF2P38778 FUN26YAL022C 1554 nt13.03□□□□□ -0.32
SMF2P38778 YHR165W-AYHR165W-A 312 nt13.03□□□□□ -0.32
SMF2P38778 HOM6YJR139C 1080 nt13.01□□□□□ -0.33
SMF2P38778 DCW1YKL046C 1350 nt13□□□□□ -0.33
SMF2P38778 LSM3YLR438C-A 270 nt13□□□□□ -0.33
SMF2P38778 YFL021C-AYFL021C-A 855 nt12.97□□□□□ -0.33
SMF2P38778 TRM9YML014W 840 nt12.96□□□□□ -0.33
SMF2P38778 MNP1YGL068W 585 nt12.91□□□□□ -0.34
SMF2P38778 ALF1YNL148C 765 nt12.88□□□□□ -0.35
SMF2P38778 CCT6YDR188W 1641 nt12.84□□□□□ -0.35
SMF2P38778 PTP1YDL230W 1008 nt12.82□□□□□ -0.36
SMF2P38778 EMI2YDR516C 1503 nt12.82□□□□□ -0.36
SMF2P38778 RKM5YLR137W 1104 nt12.81□□□□□ -0.36
SMF2P38778 RPP2AYOL039W 321 nt12.79□□□□□ -0.36
SMF2P38778 BDF1YLR399C 2061 nt12.77□□□□□ -0.37
SMF2P38778 CAC2YML102W 1407 nt12.77□□□□□ -0.37
SMF2P38778 SIS1YNL007C 1059 nt12.74□□□□□ -0.37
SMF2P38778 SUF2tP(AGG)C 72 nt12.73□□□□□ -0.37
SMF2P38778 SUF10tP(AGG)N 72 nt12.73□□□□□ -0.37
SMF2P38778 YMR090WYMR090W 684 nt12.7□□□□□ -0.38
SMF2P38778 YOR139CYOR139C 393 nt12.7□□□□□ -0.38
SMF2P38778 YDL221WYDL221W 552 nt12.69□□□□□ -0.38
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms