Protein–RNA interactions for Protein: P53959

COG6, Conserved oligomeric Golgi complex subunit 6, yeastyeast

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
COG6P53959 NSR1YGR159C 1245 nt20.91■□□□□ 0.94
COG6P53959 YML009W-BYML009W-B 477 nt20.74■□□□□ 0.91
COG6P53959 NOP1YDL014W 984 nt20.08■□□□□ 0.81
COG6P53959 MDJ1YFL016C 1536 nt18.81■□□□□ 0.6
COG6P53959 YKL036CYKL036C 393 nt18.24■□□□□ 0.51
COG6P53959 SRX1YKL086W 384 nt17.54■□□□□ 0.4
COG6P53959 Q0297Q0297 156 nt17.48■□□□□ 0.39
COG6P53959 YJL027CYJL027C 417 nt17.36■□□□□ 0.37
COG6P53959 YCR051WYCR051W 669 nt16.6■□□□□ 0.25
COG6P53959 DBP2YNL112W 1641 nt16.53■□□□□ 0.24
COG6P53959 SCS3YGL126W 1143 nt16.43■□□□□ 0.22
COG6P53959 YBR190WYBR190W 312 nt16.14■□□□□ 0.17
COG6P53959 TRN1tP(UGG)A 72 nt16.02■□□□□ 0.16
COG6P53959 SUF9tP(UGG)F 72 nt16.02■□□□□ 0.16
COG6P53959 SUF8tP(UGG)H 72 nt16.02■□□□□ 0.16
COG6P53959 tP(UGG)LtP(UGG)L 72 nt16.02■□□□□ 0.16
COG6P53959 SUF7tP(UGG)M 72 nt16.02■□□□□ 0.16
COG6P53959 tP(UGG)N1tP(UGG)N1 72 nt16.02■□□□□ 0.16
COG6P53959 tP(UGG)N2tP(UGG)N2 72 nt16.02■□□□□ 0.16
COG6P53959 tP(UGG)O1tP(UGG)O1 72 nt16.02■□□□□ 0.16
COG6P53959 SUF11tP(UGG)O2 72 nt16.02■□□□□ 0.16
COG6P53959 CCC1YLR220W 969 nt15.85■□□□□ 0.13
COG6P53959 YOL085CYOL085C 342 nt15.82■□□□□ 0.12
COG6P53959 RTC3YHR087W 336 nt15.75■□□□□ 0.11
COG6P53959 RPP1BYDL130W 321 nt15.68■□□□□ 0.1
COG6P53959 PKP1YIL042C 1185 nt15.59■□□□□ 0.09
COG6P53959 RVS167YDR388W 1449 nt15.49■□□□□ 0.07
COG6P53959 SSA3YBL075C 1950 nt15.35■□□□□ 0.05
COG6P53959 SCJ1YMR214W 1134 nt15.32■□□□□ 0.04
COG6P53959 tP(UGG)O3tP(UGG)O3 72 nt15.07■□□□□ 0
COG6P53959 PET122YER153C 765 nt15□□□□□ -0.01
COG6P53959 SHR5YOL110W 714 nt14.88□□□□□ -0.03
COG6P53959 PUT4YOR348C 1884 nt14.87□□□□□ -0.03
COG6P53959 SCR1SCR1 522 nt14.77□□□□□ -0.05
COG6P53959 URN1YPR152C 1398 nt14.64□□□□□ -0.07
COG6P53959 ATS1YAL020C 1002 nt14.63□□□□□ -0.07
COG6P53959 YDJ1YNL064C 1230 nt14.6□□□□□ -0.07
COG6P53959 RRN5YLR141W 1092 nt14.56□□□□□ -0.08
COG6P53959 DEP1YAL013W 1218 nt14.54□□□□□ -0.08
COG6P53959 ARE1YCR048W 1833 nt14.51□□□□□ -0.09
COG6P53959 OPI9YLR338W 858 nt14.5□□□□□ -0.09
COG6P53959 SAH1YER043C 1350 nt14.47□□□□□ -0.09
COG6P53959 POA1YBR022W 534 nt14.38□□□□□ -0.11
COG6P53959 RPN10YHR200W 807 nt14.37□□□□□ -0.11
COG6P53959 YHR049C-AYHR049C-A 297 nt14.31□□□□□ -0.12
COG6P53959 GAR1YHR089C 618 nt14.3□□□□□ -0.12
COG6P53959 YNL208WYNL208W 600 nt14.3□□□□□ -0.12
COG6P53959 YER088W-BYER088W-B 147 nt14.27□□□□□ -0.13
COG6P53959 Q0182Q0182 405 nt14.24□□□□□ -0.13
COG6P53959 RSB1YOR049C 1065 nt14.15□□□□□ -0.14
COG6P53959 BSC6YOL137W 1494 nt14.12□□□□□ -0.15
COG6P53959 PUN1YLR414C 792 nt14.08□□□□□ -0.16
COG6P53959 BUD23YCR047C 828 nt13.96□□□□□ -0.17
COG6P53959 YJR018WYJR018W 363 nt13.96□□□□□ -0.17
COG6P53959 PTC2YER089C 1395 nt13.95□□□□□ -0.18
COG6P53959 TIR1YER011W 765 nt13.83□□□□□ -0.2
COG6P53959 NAB2YGL122C 1578 nt13.81□□□□□ -0.2
COG6P53959 MOT3YMR070W 1473 nt13.74□□□□□ -0.21
COG6P53959 SSA1YAL005C 1929 nt13.72□□□□□ -0.21
COG6P53959 SPT5YML010W 3192 nt13.68□□□□□ -0.22
COG6P53959 YJR120WYJR120W 351 nt13.67□□□□□ -0.22
COG6P53959 PST2YDR032C 597 nt13.61□□□□□ -0.23
COG6P53959 RPP2BYDR382W 333 nt13.59□□□□□ -0.23
COG6P53959 DAL1YIR027C 1383 nt13.58□□□□□ -0.24
COG6P53959 FIS1YIL065C 468 nt13.56□□□□□ -0.24
COG6P53959 INM2YDR287W 879 nt13.52□□□□□ -0.25
COG6P53959 FPR4YLR449W 1179 nt13.52□□□□□ -0.25
COG6P53959 PHO4YFR034C 939 nt13.43□□□□□ -0.26
COG6P53959 SRB2YHR041C 633 nt13.43□□□□□ -0.26
COG6P53959 SSA4YER103W 1929 nt13.43□□□□□ -0.26
COG6P53959 YBL100CYBL100C 315 nt13.31□□□□□ -0.28
COG6P53959 MEP2YNL142W 1500 nt13.29□□□□□ -0.28
COG6P53959 YPS1YLR120C 1710 nt13.28□□□□□ -0.28
COG6P53959 BDH2YAL061W 1254 nt13.27□□□□□ -0.29
COG6P53959 WWM1YFL010C 636 nt13.17□□□□□ -0.3
COG6P53959 YDR095CYDR095C 411 nt13.16□□□□□ -0.3
COG6P53959 YHR165W-AYHR165W-A 312 nt13.15□□□□□ -0.3
COG6P53959 FUN26YAL022C 1554 nt13.15□□□□□ -0.3
COG6P53959 SHU1YHL006C 453 nt13.11□□□□□ -0.31
COG6P53959 TRM9YML014W 840 nt13.08□□□□□ -0.32
COG6P53959 LSM3YLR438C-A 270 nt13.07□□□□□ -0.32
COG6P53959 DCW1YKL046C 1350 nt13.07□□□□□ -0.32
COG6P53959 BDF1YLR399C 2061 nt13.04□□□□□ -0.32
COG6P53959 ALF1YNL148C 765 nt13.02□□□□□ -0.33
COG6P53959 YGR021WYGR021W 873 nt13.01□□□□□ -0.33
COG6P53959 YAL037C-BYAL037C-B 975 nt13□□□□□ -0.33
COG6P53959 YFL021C-AYFL021C-A 855 nt12.98□□□□□ -0.33
COG6P53959 CCT6YDR188W 1641 nt12.96□□□□□ -0.33
COG6P53959 HOM6YJR139C 1080 nt12.95□□□□□ -0.34
COG6P53959 RPP2AYOL039W 321 nt12.92□□□□□ -0.34
COG6P53959 EMI2YDR516C 1503 nt12.91□□□□□ -0.34
COG6P53959 PTP1YDL230W 1008 nt12.9□□□□□ -0.34
COG6P53959 YKL097CYKL097C 411 nt12.9□□□□□ -0.34
COG6P53959 SUF2tP(AGG)C 72 nt12.87□□□□□ -0.35
COG6P53959 SUF10tP(AGG)N 72 nt12.87□□□□□ -0.35
COG6P53959 YMR090WYMR090W 684 nt12.86□□□□□ -0.35
COG6P53959 SIS1YNL007C 1059 nt12.85□□□□□ -0.35
COG6P53959 TAT1YBR069C 1860 nt12.85□□□□□ -0.35
COG6P53959 CAC2YML102W 1407 nt12.83□□□□□ -0.36
COG6P53959 MNP1YGL068W 585 nt12.82□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 33.5 ms