RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C RET2P43621 546 aa2.03□□□□□ -2.08
ATG11YPR049C YSA1Q01976 231 aa2.03□□□□□ -2.08
ATG11YPR049C TDA9Q04545 1251 aa2.03□□□□□ -2.08
ATG11YPR049C FUM1P08417 488 aaKnown RBP2.03□□□□□ -2.09
ATG11YPR049C EPT1P22140 391 aa2.03□□□□□ -2.09
ATG11YPR049C ADY2P25613 283 aa2.03□□□□□ -2.09
ATG11YPR049C BUD14P27637 709 aa2.03□□□□□ -2.09
ATG11YPR049C MRS6P32864 603 aaKnown RBP2.03□□□□□ -2.09
ATG11YPR049C DHR2P36009 735 aaPredicted RBP2.03□□□□□ -2.09
ATG11YPR049C YIL166CP40445 542 aa2.03□□□□□ -2.09
ATG11YPR049C YJL163CP46996 555 aa2.03□□□□□ -2.09
ATG11YPR049C HOP2P53187 214 aa2.03□□□□□ -2.09
ATG11YPR049C YLR040CQ07988 224 aa2.03□□□□□ -2.09
ATG11YPR049C AHA1Q12449 350 aaKnown RBP2.03□□□□□ -2.09
ATG11YPR049C TMA17Q12513 150 aa2.03□□□□□ -2.09
ATG11YPR049C LAG2Q92325 660 aa2.03□□□□□ -2.09
ATG11YPR049C TPK2P06245 380 aa2.02□□□□□ -2.09
ATG11YPR049C LRE1P25579 583 aaKnown RBP2.02□□□□□ -2.09
ATG11YPR049C TRM7P38238 310 aaKnown RBP2.02□□□□□ -2.09
ATG11YPR049C YHR210CP38893 341 aa2.02□□□□□ -2.09
ATG11YPR049C CTK3P46963 296 aaPredicted RBP2.02□□□□□ -2.09
ATG11YPR049C ATG4P53867 494 aa2.02□□□□□ -2.09
ATG11YPR049C SPP2Q02521 185 aa2.02□□□□□ -2.09
ATG11YPR049C MTQ2Q03920 221 aaPredicted RBP2.02□□□□□ -2.09
ATG11YPR049C MLH2Q07980 695 aa2.02□□□□□ -2.09
ATG11YPR049C LAS17Q12446 633 aa2.02□□□□□ -2.09
ATG11YPR049C RPI1P23250 407 aaKnown RBP2.02□□□□□ -2.09
ATG11YPR049C EMP65P40085 556 aa2.02□□□□□ -2.09
ATG11YPR049C ICE2P40499 491 aa2.02□□□□□ -2.09
ATG11YPR049C YJR030CP47101 745 aa2.02□□□□□ -2.09
ATG11YPR049C TAF4P50105 388 aa2.02□□□□□ -2.09
ATG11YPR049C TEX1P53851 422 aaKnown RBP2.02□□□□□ -2.09
ATG11YPR049C YNL247WP53852 767 aaKnown RBP2.02□□□□□ -2.09
ATG11YPR049C YDR541CQ03049 344 aa2.02□□□□□ -2.09
ATG11YPR049C ENT5Q03769 411 aaKnown RBP2.02□□□□□ -2.09
ATG11YPR049C SWC7Q06707 132 aa2.02□□□□□ -2.09
ATG11YPR049C PEX15Q08215 383 aa2.02□□□□□ -2.09
ATG11YPR049C GRE1Q08969 168 aa2.02□□□□□ -2.09
ATG11YPR049C RIB2Q12362 591 aaKnown RBP2.02□□□□□ -2.09
ATG11YPR049C TMA7Q3E764 64 aaKnown RBP2.02□□□□□ -2.09
ATG11YPR049C COX5AP00424 153 aa2.01□□□□□ -2.09
ATG11YPR049C BCY1P07278 416 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C DAL2P25335 343 aa2.01□□□□□ -2.09
ATG11YPR049C YPT52P36018 234 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C SRP68P38687 599 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C STN1P38960 494 aa2.01□□□□□ -2.09
ATG11YPR049C YEL020CP39994 560 aa2.01□□□□□ -2.09
ATG11YPR049C TOS3P43637 560 aa2.01□□□□□ -2.09
ATG11YPR049C MPS3P47069 682 aa2.01□□□□□ -2.09
ATG11YPR049C YPT11P48559 417 aa2.01□□□□□ -2.09
ATG11YPR049C SEH1P53011 349 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C YPR003CP53394 754 aa2.01□□□□□ -2.09
ATG11YPR049C EIS1Q05050 843 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C ARP9Q05123 467 aa2.01□□□□□ -2.09
ATG11YPR049C YIM1P28625 365 aa2.01□□□□□ -2.09
ATG11YPR049C NRP1P32770 719 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
ATG11YPR049C NTR2P36118 322 aaPredicted RBP2.01□□□□□ -2.09
ATG11YPR049C SMF1P38925 575 aa2.01□□□□□ -2.09
ATG11YPR049C SEO1P39709 593 aa2.01□□□□□ -2.09
ATG11YPR049C YEL028WP39989 153 aa2.01□□□□□ -2.09
ATG11YPR049C PRE6P40303 254 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C ELP2P42935 788 aa2.01□□□□□ -2.09
ATG11YPR049C CAF16P43569 289 aa2.01□□□□□ -2.09
ATG11YPR049C PMT4P46971 762 aa2.01□□□□□ -2.09
ATG11YPR049C RAD17P48581 401 aa2.01□□□□□ -2.09
ATG11YPR049C YNL234WP53857 426 aa2.01□□□□□ -2.09
ATG11YPR049C ATG21Q02887 496 aa2.01□□□□□ -2.09
ATG11YPR049C YML122CQ03207 126 aa2.01□□□□□ -2.09
ATG11YPR049C YPR022CQ12139 1133 aa2.01□□□□□ -2.09
ATG11YPR049C POM34Q12445 299 aa2.01□□□□□ -2.09
ATG11YPR049C EFG1Q3E705 233 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C MEC1P38111 2368 aa2.01□□□□□ -2.09
ATG11YPR049C GLT1Q12680 2145 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C PCT1P13259 424 aa2.01□□□□□ -2.09
ATG11YPR049C FEN2P25621 512 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C HEM12P32347 362 aaPredicted RBP2.01□□□□□ -2.09
ATG11YPR049C RPT2P40327 437 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C YIR014WP40570 242 aa2.01□□□□□ -2.09
ATG11YPR049C IME4P41833 600 aa2.01□□□□□ -2.09
ATG11YPR049C RFX1P48743 811 aa2.01□□□□□ -2.09
ATG11YPR049C DRN1P53255 507 aaKnown RBP2.01□□□□□ -2.09
ATG11YPR049C ARG7Q04728 441 aa2.01□□□□□ -2.09
ATG11YPR049C RPN13O13563 156 aa2□□□□□ -2.09
ATG11YPR049C IDH2P28241 369 aaKnown RBP2□□□□□ -2.09
ATG11YPR049C SEC1P30619 724 aaKnown RBP2□□□□□ -2.09
ATG11YPR049C LOT5P34234 306 aa2□□□□□ -2.09
ATG11YPR049C LDB7P38210 180 aa2□□□□□ -2.09
ATG11YPR049C YHR112CP38716 378 aa2□□□□□ -2.09
ATG11YPR049C PKP1P40530 394 aa2□□□□□ -2.09
ATG11YPR049C ATP23P53722 227 aa2□□□□□ -2.09
ATG11YPR049C SED5Q01590 340 aa2□□□□□ -2.09
ATG11YPR049C THI20Q08224 551 aa2□□□□□ -2.09
ATG11YPR049C DDP1Q99321 188 aaKnown RBP2□□□□□ -2.09
ATG11YPR049C HSP82P02829 709 aaKnown RBP2□□□□□ -2.09
ATG11YPR049C SRV2P17555 526 aaKnown RBP2□□□□□ -2.09
ATG11YPR049C NAM9P27929 486 aa2□□□□□ -2.09
ATG11YPR049C NIP1P32497 812 aaKnown RBP2□□□□□ -2.09
ATG11YPR049C YPL108WQ02872 168 aaPredicted RBP2□□□□□ -2.09
ATG11YPR049C CEF1Q03654 590 aaPredicted RBP2□□□□□ -2.09
ATG11YPR049C UFO1Q04511 668 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 142.8 ms