Protein–RNA interactions for Protein: P47101

YJR030C, UPF0508 protein YJR030C, yeastyeast

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJR030CP47101 YML009W-BYML009W-B 477 nt19.88■□□□□ 0.77
YJR030CP47101 NSR1YGR159C 1245 nt19.81■□□□□ 0.76
YJR030CP47101 NOP1YDL014W 984 nt19.33■□□□□ 0.68
YJR030CP47101 YKL036CYKL036C 393 nt17.79■□□□□ 0.44
YJR030CP47101 MDJ1YFL016C 1536 nt17.58■□□□□ 0.41
YJR030CP47101 Q0297Q0297 156 nt16.9■□□□□ 0.3
YJR030CP47101 SRX1YKL086W 384 nt16.88■□□□□ 0.29
YJR030CP47101 YJL027CYJL027C 417 nt16.6■□□□□ 0.25
YJR030CP47101 SCS3YGL126W 1143 nt16.16■□□□□ 0.18
YJR030CP47101 YCR051WYCR051W 669 nt16.01■□□□□ 0.15
YJR030CP47101 DBP2YNL112W 1641 nt15.56■□□□□ 0.08
YJR030CP47101 YOL085CYOL085C 342 nt15.41■□□□□ 0.06
YJR030CP47101 TRN1tP(UGG)A 72 nt15.27■□□□□ 0.04
YJR030CP47101 SUF9tP(UGG)F 72 nt15.27■□□□□ 0.04
YJR030CP47101 SUF8tP(UGG)H 72 nt15.27■□□□□ 0.04
YJR030CP47101 tP(UGG)LtP(UGG)L 72 nt15.27■□□□□ 0.04
YJR030CP47101 SUF7tP(UGG)M 72 nt15.27■□□□□ 0.04
YJR030CP47101 tP(UGG)N1tP(UGG)N1 72 nt15.27■□□□□ 0.04
YJR030CP47101 tP(UGG)N2tP(UGG)N2 72 nt15.27■□□□□ 0.04
YJR030CP47101 tP(UGG)O1tP(UGG)O1 72 nt15.27■□□□□ 0.04
YJR030CP47101 SUF11tP(UGG)O2 72 nt15.27■□□□□ 0.04
YJR030CP47101 RPP1BYDL130W 321 nt15.17■□□□□ 0.02
YJR030CP47101 PKP1YIL042C 1185 nt15.17■□□□□ 0.02
YJR030CP47101 CCC1YLR220W 969 nt15.12■□□□□ 0.01
YJR030CP47101 YBR190WYBR190W 312 nt15.03■□□□□ -0
YJR030CP47101 SCJ1YMR214W 1134 nt14.78□□□□□ -0.04
YJR030CP47101 RTC3YHR087W 336 nt14.69□□□□□ -0.06
YJR030CP47101 RVS167YDR388W 1449 nt14.65□□□□□ -0.06
YJR030CP47101 PET122YER153C 765 nt14.48□□□□□ -0.09
YJR030CP47101 ATS1YAL020C 1002 nt14.47□□□□□ -0.09
YJR030CP47101 tP(UGG)O3tP(UGG)O3 72 nt14.45□□□□□ -0.1
YJR030CP47101 SCR1SCR1 522 nt14.34□□□□□ -0.11
YJR030CP47101 SHR5YOL110W 714 nt14.11□□□□□ -0.15
YJR030CP47101 RRN5YLR141W 1092 nt14.06□□□□□ -0.16
YJR030CP47101 YDJ1YNL064C 1230 nt13.98□□□□□ -0.17
YJR030CP47101 YER088W-BYER088W-B 147 nt13.79□□□□□ -0.2
YJR030CP47101 SSA3YBL075C 1950 nt13.79□□□□□ -0.2
YJR030CP47101 RSB1YOR049C 1065 nt13.76□□□□□ -0.21
YJR030CP47101 URN1YPR152C 1398 nt13.73□□□□□ -0.21
YJR030CP47101 DEP1YAL013W 1218 nt13.71□□□□□ -0.21
YJR030CP47101 PUT4YOR348C 1884 nt13.67□□□□□ -0.22
YJR030CP47101 GAR1YHR089C 618 nt13.66□□□□□ -0.22
YJR030CP47101 RPN10YHR200W 807 nt13.54□□□□□ -0.24
YJR030CP47101 OPI9YLR338W 858 nt13.54□□□□□ -0.24
YJR030CP47101 YNL208WYNL208W 600 nt13.51□□□□□ -0.25
YJR030CP47101 SAH1YER043C 1350 nt13.46□□□□□ -0.25
YJR030CP47101 ARE1YCR048W 1833 nt13.41□□□□□ -0.26
YJR030CP47101 PST2YDR032C 597 nt13.39□□□□□ -0.27
YJR030CP47101 POA1YBR022W 534 nt13.23□□□□□ -0.29
YJR030CP47101 YHR049C-AYHR049C-A 297 nt13.22□□□□□ -0.29
YJR030CP47101 TIR1YER011W 765 nt13.21□□□□□ -0.29
YJR030CP47101 PUN1YLR414C 792 nt13.15□□□□□ -0.3
YJR030CP47101 YJR018WYJR018W 363 nt13.1□□□□□ -0.31
YJR030CP47101 SSA1YAL005C 1929 nt13.05□□□□□ -0.32
YJR030CP47101 PTC2YER089C 1395 nt12.99□□□□□ -0.33
YJR030CP47101 YKL097CYKL097C 411 nt12.97□□□□□ -0.33
YJR030CP47101 BSC6YOL137W 1494 nt12.94□□□□□ -0.34
YJR030CP47101 BUD23YCR047C 828 nt12.92□□□□□ -0.34
YJR030CP47101 YJR120WYJR120W 351 nt12.87□□□□□ -0.35
YJR030CP47101 RPP2BYDR382W 333 nt12.85□□□□□ -0.35
YJR030CP47101 SHU1YHL006C 453 nt12.85□□□□□ -0.35
YJR030CP47101 NAB2YGL122C 1578 nt12.85□□□□□ -0.35
YJR030CP47101 SRB2YHR041C 633 nt12.8□□□□□ -0.36
YJR030CP47101 DAL1YIR027C 1383 nt12.67□□□□□ -0.38
YJR030CP47101 INM2YDR287W 879 nt12.65□□□□□ -0.38
YJR030CP47101 YAL037C-BYAL037C-B 975 nt12.65□□□□□ -0.38
YJR030CP47101 FIS1YIL065C 468 nt12.63□□□□□ -0.39
YJR030CP47101 WWM1YFL010C 636 nt12.62□□□□□ -0.39
YJR030CP47101 FPR4YLR449W 1179 nt12.62□□□□□ -0.39
YJR030CP47101 BDH2YAL061W 1254 nt12.58□□□□□ -0.4
YJR030CP47101 YGR021WYGR021W 873 nt12.56□□□□□ -0.4
YJR030CP47101 PHO4YFR034C 939 nt12.54□□□□□ -0.4
YJR030CP47101 YBL100CYBL100C 315 nt12.52□□□□□ -0.41
YJR030CP47101 HOM6YJR139C 1080 nt12.49□□□□□ -0.41
YJR030CP47101 YFL021C-AYFL021C-A 855 nt12.42□□□□□ -0.42
YJR030CP47101 MNP1YGL068W 585 nt12.42□□□□□ -0.42
YJR030CP47101 LSM3YLR438C-A 270 nt12.41□□□□□ -0.42
YJR030CP47101 YOR139CYOR139C 393 nt12.37□□□□□ -0.43
YJR030CP47101 FUN26YAL022C 1554 nt12.37□□□□□ -0.43
YJR030CP47101 SPT5YML010W 3192 nt12.37□□□□□ -0.43
YJR030CP47101 TRM9YML014W 840 nt12.36□□□□□ -0.43
YJR030CP47101 RKM5YLR137W 1104 nt12.31□□□□□ -0.44
YJR030CP47101 YPS1YLR120C 1710 nt12.31□□□□□ -0.44
YJR030CP47101 NPL3YDR432W 1245 nt12.25□□□□□ -0.45
YJR030CP47101 CCT6YDR188W 1641 nt12.22□□□□□ -0.45
YJR030CP47101 YDR095CYDR095C 411 nt12.22□□□□□ -0.45
YJR030CP47101 YOL037CYOL037C 354 nt12.22□□□□□ -0.45
YJR030CP47101 ALF1YNL148C 765 nt12.2□□□□□ -0.46
YJR030CP47101 YHR165W-AYHR165W-A 312 nt12.17□□□□□ -0.46
YJR030CP47101 MEP2YNL142W 1500 nt12.16□□□□□ -0.46
YJR030CP47101 SUF2tP(AGG)C 72 nt12.14□□□□□ -0.47
YJR030CP47101 SUF10tP(AGG)N 72 nt12.14□□□□□ -0.47
YJR030CP47101 SIS1YNL007C 1059 nt12.02□□□□□ -0.49
YJR030CP47101 RPP2AYOL039W 321 nt12□□□□□ -0.49
YJR030CP47101 DCW1YKL046C 1350 nt11.95□□□□□ -0.5
YJR030CP47101 PTP1YDL230W 1008 nt11.94□□□□□ -0.5
YJR030CP47101 YLR281CYLR281C 468 nt11.94□□□□□ -0.5
YJR030CP47101 SSA4YER103W 1929 nt11.92□□□□□ -0.5
YJR030CP47101 tM(CAU)CtM(CAU)C 72 nt11.9□□□□□ -0.5
YJR030CP47101 IMT4tM(CAU)E 72 nt11.9□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 10.9 ms