Protein–RNA interactions for Protein: P40303

PRE6, Proteasome subunit alpha type-4, yeastyeast

Known RBP Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRE6P40303 NSR1YGR159C 1245 nt18.72■□□□□ 0.59
PRE6P40303 YML009W-BYML009W-B 477 nt18.61■□□□□ 0.57
PRE6P40303 NOP1YDL014W 984 nt17.82■□□□□ 0.44
PRE6P40303 MDJ1YFL016C 1536 nt17.12■□□□□ 0.33
PRE6P40303 YKL036CYKL036C 393 nt16.13■□□□□ 0.17
PRE6P40303 YJL027CYJL027C 417 nt15.69■□□□□ 0.1
PRE6P40303 SRX1YKL086W 384 nt15.6■□□□□ 0.09
PRE6P40303 Q0297Q0297 156 nt15.49■□□□□ 0.07
PRE6P40303 DBP2YNL112W 1641 nt14.95□□□□□ -0.02
PRE6P40303 YCR051WYCR051W 669 nt14.83□□□□□ -0.04
PRE6P40303 YBR190WYBR190W 312 nt14.59□□□□□ -0.07
PRE6P40303 SCS3YGL126W 1143 nt14.52□□□□□ -0.09
PRE6P40303 TRN1tP(UGG)A 72 nt14.36□□□□□ -0.11
PRE6P40303 SUF9tP(UGG)F 72 nt14.36□□□□□ -0.11
PRE6P40303 SUF8tP(UGG)H 72 nt14.36□□□□□ -0.11
PRE6P40303 tP(UGG)LtP(UGG)L 72 nt14.36□□□□□ -0.11
PRE6P40303 SUF7tP(UGG)M 72 nt14.36□□□□□ -0.11
PRE6P40303 tP(UGG)N1tP(UGG)N1 72 nt14.36□□□□□ -0.11
PRE6P40303 tP(UGG)N2tP(UGG)N2 72 nt14.36□□□□□ -0.11
PRE6P40303 tP(UGG)O1tP(UGG)O1 72 nt14.36□□□□□ -0.11
PRE6P40303 SUF11tP(UGG)O2 72 nt14.36□□□□□ -0.11
PRE6P40303 RTC3YHR087W 336 nt14.31□□□□□ -0.12
PRE6P40303 CCC1YLR220W 969 nt14.27□□□□□ -0.13
PRE6P40303 YOL085CYOL085C 342 nt14□□□□□ -0.17
PRE6P40303 PKP1YIL042C 1185 nt13.92□□□□□ -0.18
PRE6P40303 RPP1BYDL130W 321 nt13.91□□□□□ -0.18
PRE6P40303 RVS167YDR388W 1449 nt13.9□□□□□ -0.18
PRE6P40303 SCJ1YMR214W 1134 nt13.87□□□□□ -0.19
PRE6P40303 SSA3YBL075C 1950 nt13.6□□□□□ -0.23
PRE6P40303 PUT4YOR348C 1884 nt13.59□□□□□ -0.23
PRE6P40303 tP(UGG)O3tP(UGG)O3 72 nt13.46□□□□□ -0.25
PRE6P40303 PET122YER153C 765 nt13.41□□□□□ -0.26
PRE6P40303 SHR5YOL110W 714 nt13.34□□□□□ -0.27
PRE6P40303 URN1YPR152C 1398 nt13.25□□□□□ -0.29
PRE6P40303 ARE1YCR048W 1833 nt13.24□□□□□ -0.29
PRE6P40303 DEP1YAL013W 1218 nt13.2□□□□□ -0.3
PRE6P40303 SAH1YER043C 1350 nt13.18□□□□□ -0.3
PRE6P40303 POA1YBR022W 534 nt13.16□□□□□ -0.3
PRE6P40303 YHR049C-AYHR049C-A 297 nt13.1□□□□□ -0.31
PRE6P40303 OPI9YLR338W 858 nt13.09□□□□□ -0.31
PRE6P40303 SCR1SCR1 522 nt13.08□□□□□ -0.32
PRE6P40303 ATS1YAL020C 1002 nt13□□□□□ -0.33
PRE6P40303 YDJ1YNL064C 1230 nt12.98□□□□□ -0.33
PRE6P40303 RRN5YLR141W 1092 nt12.96□□□□□ -0.33
PRE6P40303 BSC6YOL137W 1494 nt12.95□□□□□ -0.34
PRE6P40303 RPN10YHR200W 807 nt12.89□□□□□ -0.35
PRE6P40303 YNL208WYNL208W 600 nt12.84□□□□□ -0.35
PRE6P40303 GAR1YHR089C 618 nt12.83□□□□□ -0.36
PRE6P40303 BUD23YCR047C 828 nt12.77□□□□□ -0.37
PRE6P40303 PUN1YLR414C 792 nt12.7□□□□□ -0.38
PRE6P40303 YER088W-BYER088W-B 147 nt12.69□□□□□ -0.38
PRE6P40303 PTC2YER089C 1395 nt12.67□□□□□ -0.38
PRE6P40303 YJR018WYJR018W 363 nt12.6□□□□□ -0.39
PRE6P40303 RSB1YOR049C 1065 nt12.59□□□□□ -0.39
PRE6P40303 SPT5YML010W 3192 nt12.56□□□□□ -0.4
PRE6P40303 NAB2YGL122C 1578 nt12.5□□□□□ -0.41
PRE6P40303 TIR1YER011W 765 nt12.39□□□□□ -0.43
PRE6P40303 YJR120WYJR120W 351 nt12.38□□□□□ -0.43
PRE6P40303 FIS1YIL065C 468 nt12.35□□□□□ -0.43
PRE6P40303 SSA1YAL005C 1929 nt12.35□□□□□ -0.43
PRE6P40303 SSA4YER103W 1929 nt12.33□□□□□ -0.44
PRE6P40303 FPR4YLR449W 1179 nt12.31□□□□□ -0.44
PRE6P40303 DAL1YIR027C 1383 nt12.28□□□□□ -0.44
PRE6P40303 RPP2BYDR382W 333 nt12.2□□□□□ -0.46
PRE6P40303 PHO4YFR034C 939 nt12.2□□□□□ -0.46
PRE6P40303 MEP2YNL142W 1500 nt12.16□□□□□ -0.46
PRE6P40303 SRB2YHR041C 633 nt12.15□□□□□ -0.46
PRE6P40303 INM2YDR287W 879 nt12.14□□□□□ -0.47
PRE6P40303 YPS1YLR120C 1710 nt12.07□□□□□ -0.48
PRE6P40303 YBL100CYBL100C 315 nt12.03□□□□□ -0.48
PRE6P40303 DCW1YKL046C 1350 nt12.03□□□□□ -0.48
PRE6P40303 YHR165W-AYHR165W-A 312 nt11.99□□□□□ -0.49
PRE6P40303 PST2YDR032C 597 nt11.96□□□□□ -0.49
PRE6P40303 YDR095CYDR095C 411 nt11.94□□□□□ -0.5
PRE6P40303 BDH2YAL061W 1254 nt11.91□□□□□ -0.5
PRE6P40303 FUN26YAL022C 1554 nt11.87□□□□□ -0.51
PRE6P40303 BDF1YLR399C 2061 nt11.87□□□□□ -0.51
PRE6P40303 EMI2YDR516C 1503 nt11.82□□□□□ -0.52
PRE6P40303 WWM1YFL010C 636 nt11.82□□□□□ -0.52
PRE6P40303 ALF1YNL148C 765 nt11.77□□□□□ -0.53
PRE6P40303 TRM9YML014W 840 nt11.75□□□□□ -0.53
PRE6P40303 PTP1YDL230W 1008 nt11.74□□□□□ -0.53
PRE6P40303 CAC2YML102W 1407 nt11.74□□□□□ -0.53
PRE6P40303 YKL097CYKL097C 411 nt11.73□□□□□ -0.53
PRE6P40303 YBR220CYBR220C 1683 nt11.71□□□□□ -0.54
PRE6P40303 TAT1YBR069C 1860 nt11.7□□□□□ -0.54
PRE6P40303 RPP2AYOL039W 321 nt11.7□□□□□ -0.54
PRE6P40303 YMR090WYMR090W 684 nt11.69□□□□□ -0.54
PRE6P40303 YDL221WYDL221W 552 nt11.68□□□□□ -0.54
PRE6P40303 LSM3YLR438C-A 270 nt11.64□□□□□ -0.55
PRE6P40303 CCT6YDR188W 1641 nt11.64□□□□□ -0.55
PRE6P40303 SHU1YHL006C 453 nt11.62□□□□□ -0.55
PRE6P40303 SDH1YKL148C 1923 nt11.61□□□□□ -0.55
PRE6P40303 YAL037C-BYAL037C-B 975 nt11.61□□□□□ -0.55
PRE6P40303 SIS1YNL007C 1059 nt11.58□□□□□ -0.56
PRE6P40303 YFL021C-AYFL021C-A 855 nt11.56□□□□□ -0.56
PRE6P40303 IRC15YPL017C 1500 nt11.55□□□□□ -0.56
PRE6P40303 SUF2tP(AGG)C 72 nt11.55□□□□□ -0.56
PRE6P40303 SUF10tP(AGG)N 72 nt11.55□□□□□ -0.56
PRE6P40303 YGR021WYGR021W 873 nt11.54□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms