RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W THI20Q08224 551 aa2.9□□□□□ -1.95
MRPL40YPL173W RKM1Q08961 583 aaPredicted RBP2.9□□□□□ -1.95
MRPL40YPL173W CFT2Q12102 859 aaPredicted RBP2.9□□□□□ -1.95
MRPL40YPL173W RKM5Q12367 367 aa2.9□□□□□ -1.95
MRPL40YPL173W ARP6Q12509 438 aa2.9□□□□□ -1.95
MRPL40YPL173W CTF3Q12748 733 aa2.9□□□□□ -1.95
MRPL40YPL173W AMD1P15274 810 aaKnown RBP2.89□□□□□ -1.95
MRPL40YPL173W GLK1P17709 500 aaKnown RBP2.89□□□□□ -1.95
MRPL40YPL173W URA4P20051 364 aa2.89□□□□□ -1.95
MRPL40YPL173W CLN1P20437 546 aa2.89□□□□□ -1.95
MRPL40YPL173W YCR007CP25354 239 aa2.89□□□□□ -1.95
MRPL40YPL173W MGR1P25573 417 aa2.89□□□□□ -1.95
MRPL40YPL173W KRE2P27809 442 aa2.89□□□□□ -1.95
MRPL40YPL173W FUN19P28003 413 aaPredicted RBP2.89□□□□□ -1.95
MRPL40YPL173W SIN4P32259 974 aa2.89□□□□□ -1.95
MRPL40YPL173W PUP2P32379 260 aa2.89□□□□□ -1.95
MRPL40YPL173W PRP21P32524 280 aaPredicted RBP2.89□□□□□ -1.95
MRPL40YPL173W VPH1P32563 840 aaKnown RBP2.89□□□□□ -1.95
MRPL40YPL173W UTR4P32626 227 aa2.89□□□□□ -1.95
MRPL40YPL173W LTV1P34078 463 aa2.89□□□□□ -1.95
MRPL40YPL173W HEL1P36113 551 aa2.89□□□□□ -1.95
MRPL40YPL173W SCO2P38072 301 aa2.89□□□□□ -1.95
MRPL40YPL173W ARA1P38115 344 aa2.89□□□□□ -1.95
MRPL40YPL173W NTC20P38302 140 aaPredicted RBP2.89□□□□□ -1.95
MRPL40YPL173W GDI1P39958 451 aaKnown RBP2.89□□□□□ -1.95
MRPL40YPL173W SCD6P45978 349 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
MRPL40YPL173W YGR111WP53265 400 aa2.89□□□□□ -1.95
MRPL40YPL173W PEX25Q02969 394 aa2.89□□□□□ -1.95
MRPL40YPL173W MSS11Q03825 758 aa2.89□□□□□ -1.95
MRPL40YPL173W HEL2Q05580 639 aaKnown RBP2.89□□□□□ -1.95
MRPL40YPL173W BNA5Q05979 453 aa2.89□□□□□ -1.95
MRPL40YPL173W PHO92Q06390 306 aa2.89□□□□□ -1.95
MRPL40YPL173W UBX3Q12229 455 aa2.89□□□□□ -1.95
MRPL40YPL173W RPN5Q12250 445 aaKnown RBP2.89□□□□□ -1.95
MRPL40YPL173W BRR1Q99177 341 aaPredicted RBP2.89□□□□□ -1.95
MRPL40YPL173W TPM1P17536 199 aaKnown RBP2.88□□□□□ -1.95
MRPL40YPL173W ACH1P32316 526 aa2.88□□□□□ -1.95
MRPL40YPL173W ECM15P35195 104 aa2.88□□□□□ -1.95
MRPL40YPL173W VHC1P38329 1120 aa2.88□□□□□ -1.95
MRPL40YPL173W FAU1P40099 211 aa2.88□□□□□ -1.95
MRPL40YPL173W YJL055WP47044 245 aa2.88□□□□□ -1.95
MRPL40YPL173W RMD9P53140 646 aaKnown RBP2.88□□□□□ -1.95
MRPL40YPL173W YGR016WP53209 190 aa2.88□□□□□ -1.95
MRPL40YPL173W SAM50P53969 484 aa2.88□□□□□ -1.95
MRPL40YPL173W SMA1Q02651 245 aa2.88□□□□□ -1.95
MRPL40YPL173W HOT1Q03213 719 aa2.88□□□□□ -1.95
MRPL40YPL173W YMR130WQ04223 302 aa2.88□□□□□ -1.95
MRPL40YPL173W RBA50Q04418 439 aa2.88□□□□□ -1.95
MRPL40YPL173W YMR254CQ04838 102 aa2.88□□□□□ -1.95
MRPL40YPL173W MLH2Q07980 695 aa2.88□□□□□ -1.95
MRPL40YPL173W DSE3Q08729 430 aa2.88□□□□□ -1.95
MRPL40YPL173W COX3P00420 269 aa2.87□□□□□ -1.95
MRPL40YPL173W LPD1P09624 499 aaKnown RBP2.87□□□□□ -1.95
MRPL40YPL173W RPL1AP0CX43 217 aaKnown RBP2.87□□□□□ -1.95
MRPL40YPL173W RPL1BP0CX44 217 aaKnown RBP2.87□□□□□ -1.95
MRPL40YPL173W ARO3P14843 370 aaKnown RBP2.87□□□□□ -1.95
MRPL40YPL173W BRF1P29056 596 aa2.87□□□□□ -1.95
MRPL40YPL173W BEM1P29366 551 aa2.87□□□□□ -1.95
MRPL40YPL173W FRE1P32791 686 aa2.87□□□□□ -1.95
MRPL40YPL173W GYP6P32806 458 aa2.87□□□□□ -1.95
MRPL40YPL173W OSH3P38713 996 aaKnown RBP2.87□□□□□ -1.95
MRPL40YPL173W CSM2P40465 213 aa2.87□□□□□ -1.95
MRPL40YPL173W SAS2P40963 338 aa2.87□□□□□ -1.95
MRPL40YPL173W POP1P41812 875 aa2.87□□□□□ -1.95
MRPL40YPL173W RPS0BP46654 252 aaKnown RBP2.87□□□□□ -1.95
MRPL40YPL173W YJL132WP47014 750 aa2.87□□□□□ -1.95
MRPL40YPL173W CUL3P53202 744 aa2.87□□□□□ -1.95
MRPL40YPL173W GPI1P53306 609 aa2.87□□□□□ -1.95
MRPL40YPL173W YMR317WQ04893 1140 aa2.87□□□□□ -1.95
MRPL40YPL173W IVY1Q04934 453 aa2.87□□□□□ -1.95
MRPL40YPL173W GLO2Q05584 274 aa2.87□□□□□ -1.95
MRPL40YPL173W DCS1Q06151 350 aa2.87□□□□□ -1.95
MRPL40YPL173W VPS54Q12071 889 aa2.87□□□□□ -1.95
MRPL40YPL173W YMR230W-AQ3E7B5 62 aa2.87□□□□□ -1.95
MRPL40YPL173W YLR278CQ05854 1341 aa2.87□□□□□ -1.95
MRPL40YPL173W TY1B-AO13527 1196 aaKnown RBP2.86□□□□□ -1.95
MRPL40YPL173W SPO7P18410 259 aa2.86□□□□□ -1.95
MRPL40YPL173W BUB3P26449 341 aa2.86□□□□□ -1.95
MRPL40YPL173W ERG1P32476 496 aaKnown RBP2.86□□□□□ -1.95
MRPL40YPL173W NIP1P32497 812 aaKnown RBP2.86□□□□□ -1.95
MRPL40YPL173W FMP46P36141 133 aaKnown RBP2.86□□□□□ -1.95
MRPL40YPL173W YHR054CP38780 354 aa2.86□□□□□ -1.95
MRPL40YPL173W CAJ1P39101 391 aa2.86□□□□□ -1.95
MRPL40YPL173W VPS52P39904 641 aa2.86□□□□□ -1.95
MRPL40YPL173W VHS2P40463 436 aa2.86□□□□□ -1.95
MRPL40YPL173W TDA7P53882 636 aaPredicted RBP2.86□□□□□ -1.95
MRPL40YPL173W OCA2P53949 197 aa2.86□□□□□ -1.95
MRPL40YPL173W YDR286CQ05530 114 aa2.86□□□□□ -1.95
MRPL40YPL173W YLR456WQ06199 204 aa2.86□□□□□ -1.95
MRPL40YPL173W DIS3Q08162 1001 aaKnown RBP2.86□□□□□ -1.95
MRPL40YPL173W DCI1Q08558 271 aa2.86□□□□□ -1.95
MRPL40YPL173W SKS1Q12505 502 aa2.86□□□□□ -1.95
MRPL40YPL173W SCEIP03882 235 aa2.85□□□□□ -1.95
MRPL40YPL173W HNM1P19807 563 aa2.85□□□□□ -1.95
MRPL40YPL173W RHB1P25378 209 aa2.85□□□□□ -1.95
MRPL40YPL173W VPS17P32913 551 aa2.85□□□□□ -1.95
MRPL40YPL173W SOR1P35497 357 aaKnown RBP2.85□□□□□ -1.95
MRPL40YPL173W ASC1P38011 319 aaKnown RBP2.85□□□□□ -1.95
MRPL40YPL173W YBR139WP38109 508 aa2.85□□□□□ -1.95
MRPL40YPL173W ZTA1P38230 334 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms