RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C LRP1P38801 184 aaKnown RBP6.3□□□□□ -1.4
YPT1YFL038C PEX18P38855 283 aa6.3□□□□□ -1.4
YPT1YFL038C IPT1P38954 527 aa6.3□□□□□ -1.4
YPT1YFL038C SOP4P39543 234 aaPredicted RBP6.3□□□□□ -1.4
YPT1YFL038C YAR028WP39548 234 aa6.3□□□□□ -1.4
YPT1YFL038C HEM14P40012 539 aa6.3□□□□□ -1.4
YPT1YFL038C ARF3P40994 183 aaRIP-Chip data6.3□□□□□ -1.4not detected
YPT1YFL038C SWP82P43554 623 aa6.3□□□□□ -1.4
YPT1YFL038C GYP8P43570 497 aa6.3□□□□□ -1.4
YPT1YFL038C GLG2P47011 380 aa6.3□□□□□ -1.4
YPT1YFL038C MDM34P53083 459 aa6.3□□□□□ -1.4
YPT1YFL038C MPS2P53159 387 aa6.3□□□□□ -1.4
YPT1YFL038C DAM1P53267 343 aa6.3□□□□□ -1.4
YPT1YFL038C GOR1P53839 350 aa6.3□□□□□ -1.4
YPT1YFL038C YNL260CP53846 198 aa6.3□□□□□ -1.4
YPT1YFL038C IGO1P53897 168 aa6.3□□□□□ -1.4
YPT1YFL038C COG5P53951 403 aa6.3□□□□□ -1.4
YPT1YFL038C RRP17Q04031 235 aaPredicted RBP6.3□□□□□ -1.4
YPT1YFL038C PPN1Q04119 674 aa6.3□□□□□ -1.4
YPT1YFL038C SEG1Q04279 960 aa6.3□□□□□ -1.4
YPT1YFL038C ARP10Q04549 284 aa6.3□□□□□ -1.4
YPT1YFL038C PER33Q12144 273 aa6.3□□□□□ -1.4
YPT1YFL038C RPN5Q12250 445 aaKnown RBP6.3□□□□□ -1.4
YPT1YFL038C PST1Q12355 444 aa6.3□□□□□ -1.4
YPT1YFL038C TRM10Q12400 293 aa6.3□□□□□ -1.4
YPT1YFL038C NSI1Q12457 570 aa6.3□□□□□ -1.4
YPT1YFL038C YPR096CO13587 100 aa6.29□□□□□ -1.4
YPT1YFL038C TIM9O74700 87 aa6.29□□□□□ -1.4
YPT1YFL038C SWI5P08153 709 aa6.29□□□□□ -1.4
YPT1YFL038C HMG2P12684 1045 aa6.29□□□□□ -1.4
YPT1YFL038C GBP2P25555 427 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
YPT1YFL038C HBS1P32769 611 aaKnown RBP6.29□□□□□ -1.4
YPT1YFL038C GDH2P33327 1092 aaKnown RBP6.29□□□□□ -1.4
YPT1YFL038C GLG1P36143 616 aa6.29□□□□□ -1.4
YPT1YFL038C SOL2P37262 315 aa6.29□□□□□ -1.4
YPT1YFL038C COS111P38308 924 aa6.29□□□□□ -1.4
YPT1YFL038C DUN1P39009 513 aa6.29□□□□□ -1.4
YPT1YFL038C MET12P46151 657 aa6.29□□□□□ -1.4
YPT1YFL038C YGR015CP53208 328 aa6.29□□□□□ -1.4
YPT1YFL038C ESF2P53743 316 aaKnown RBP6.29□□□□□ -1.4
YPT1YFL038C VAC7P53950 1165 aa6.29□□□□□ -1.4
YPT1YFL038C HXT15P54854 567 aa6.29□□□□□ -1.4
YPT1YFL038C YPL107WQ02873 248 aa6.29□□□□□ -1.4
YPT1YFL038C MET31Q03081 177 aa6.29□□□□□ -1.4
YPT1YFL038C EMI2Q04409 500 aaKnown RBP6.29□□□□□ -1.4
YPT1YFL038C APC4Q04601 652 aa6.29□□□□□ -1.4
YPT1YFL038C BSC2Q05611 235 aa6.29□□□□□ -1.4
YPT1YFL038C VPS74Q06385 345 aa6.29□□□□□ -1.4
YPT1YFL038C MCA1Q08601 432 aa6.29□□□□□ -1.4
YPT1YFL038C SOG2Q08817 791 aa6.29□□□□□ -1.4
YPT1YFL038C SMF3Q12078 473 aaPredicted RBP6.29□□□□□ -1.4
YPT1YFL038C YPL245WQ12179 454 aaKnown RBP6.29□□□□□ -1.4
YPT1YFL038C YDL199CQ12407 687 aa6.29□□□□□ -1.4
YPT1YFL038C BRR1Q99177 341 aaPredicted RBP6.29□□□□□ -1.4
YPT1YFL038C MF(ALPHA)1P01149 165 aa6.28□□□□□ -1.4
YPT1YFL038C ATP4P05626 244 aa6.28□□□□□ -1.4
YPT1YFL038C CDC4P07834 779 aa6.28□□□□□ -1.4
YPT1YFL038C KAR1P11927 433 aa6.28□□□□□ -1.4
YPT1YFL038C REV1P12689 985 aa6.28□□□□□ -1.4
YPT1YFL038C TEC1P18412 486 aa6.28□□□□□ -1.4
YPT1YFL038C RDS2P19541 446 aaKnown RBP6.28□□□□□ -1.4
YPT1YFL038C PHO84P25297 587 aaKnown RBP6.28□□□□□ -1.4
YPT1YFL038C SLM5P25345 492 aaKnown RBP6.28□□□□□ -1.4
YPT1YFL038C RHB1P25378 209 aa6.28□□□□□ -1.4
YPT1YFL038C BUD23P25627 275 aaPredicted RBP6.28□□□□□ -1.4
YPT1YFL038C DOM34P33309 386 aa6.28□□□□□ -1.4
YPT1YFL038C DEF1P35732 738 aaKnown RBP6.28□□□□□ -1.4
YPT1YFL038C YBR139WP38109 508 aa6.28□□□□□ -1.4
YPT1YFL038C ARA1P38115 344 aa6.28□□□□□ -1.4
YPT1YFL038C SAF1P38352 637 aa6.28□□□□□ -1.4
YPT1YFL038C ATG7P38862 630 aa6.28□□□□□ -1.4
YPT1YFL038C SPF1P39986 1215 aaKnown RBP6.28□□□□□ -1.4
YPT1YFL038C TPA1P40032 644 aaKnown RBP6.28□□□□□ -1.4
YPT1YFL038C JHD1P40034 492 aa6.28□□□□□ -1.4
YPT1YFL038C UTP18P40362 594 aaPredicted RBP6.28□□□□□ -1.4
YPT1YFL038C MPM1P40364 252 aa6.28□□□□□ -1.4
YPT1YFL038C FAF1P40546 346 aaPredicted RBP6.28□□□□□ -1.4
YPT1YFL038C TY4A-JP47023 414 aa6.28□□□□□ -1.4
YPT1YFL038C YJL055WP47044 245 aa6.28□□□□□ -1.4
YPT1YFL038C YJR030CP47101 745 aa6.28□□□□□ -1.4
YPT1YFL038C YJR149WP47177 404 aa6.28□□□□□ -1.4
YPT1YFL038C HST3P53687 447 aa6.28□□□□□ -1.4
YPT1YFL038C YNL140CP53910 189 aa6.28□□□□□ -1.4
YPT1YFL038C YLR257WQ06146 321 aaKnown RBP6.28□□□□□ -1.4
YPT1YFL038C ARR1Q06596 294 aa6.28□□□□□ -1.4
YPT1YFL038C RRT8Q08219 342 aa6.28□□□□□ -1.4
YPT1YFL038C NMD4Q12129 218 aa6.28□□□□□ -1.4
YPT1YFL038C UBR1P19812 1950 aa6.27□□□□□ -1.4
YPT1YFL038C CPA1P07258 411 aaKnown RBP6.27□□□□□ -1.41
YPT1YFL038C UNG1P12887 359 aa6.27□□□□□ -1.41
YPT1YFL038C IDI1P15496 288 aa6.27□□□□□ -1.41
YPT1YFL038C EPT1P22140 391 aa6.27□□□□□ -1.41
YPT1YFL038C PEX34P25584 144 aa6.27□□□□□ -1.41
YPT1YFL038C SEC17P32602 292 aa6.27□□□□□ -1.41
YPT1YFL038C HCS1P34243 683 aa6.27□□□□□ -1.41
YPT1YFL038C RPF2P36160 344 aaKnown RBP6.27□□□□□ -1.41
YPT1YFL038C DMA1P38823 416 aa6.27□□□□□ -1.41
YPT1YFL038C YEL020CP39994 560 aa6.27□□□□□ -1.41
YPT1YFL038C SPO73P40031 143 aa6.27□□□□□ -1.41
YPT1YFL038C BIT61P47041 543 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms