RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W SPO14P36126 1683 aa4.88□□□□□ -1.63
SRO7YPR032W DJP1P40564 432 aa4.88□□□□□ -1.63
SRO7YPR032W FPR4Q06205 392 aaPredicted RBP4.88□□□□□ -1.63
SRO7YPR032W KIP3P53086 805 aaKnown RBP4.87□□□□□ -1.63
SRO7YPR032W IFH1P39520 1085 aa4.86□□□□□ -1.63
SRO7YPR032W KRI1P42846 591 aaKnown RBP4.86□□□□□ -1.63
SRO7YPR032W DEF1P35732 738 aaKnown RBP4.86□□□□□ -1.63
SRO7YPR032W BYE1P36106 594 aa4.86□□□□□ -1.63
SRO7YPR032W VPS4P52917 437 aa4.86□□□□□ -1.63
SRO7YPR032W PIL1P53252 339 aaKnown RBP4.86□□□□□ -1.63
SRO7YPR032W YPP1P46951 817 aa4.85□□□□□ -1.63
SRO7YPR032W MET5P47169 1442 aa4.85□□□□□ -1.63
SRO7YPR032W ARL1P38116 183 aaKnown RBP4.85□□□□□ -1.63
SRO7YPR032W RAD26P40352 1085 aa4.85□□□□□ -1.63
SRO7YPR032W PDS5Q04264 1277 aa4.85□□□□□ -1.63
SRO7YPR032W PLP2Q12017 286 aa4.84□□□□□ -1.63
SRO7YPR032W DNF3Q12674 1656 aa4.84□□□□□ -1.63
SRO7YPR032W MLP1Q02455 1875 aaKnown RBP4.84□□□□□ -1.63
SRO7YPR032W NMD2P38798 1089 aaKnown RBP4.84□□□□□ -1.63
SRO7YPR032W TEA1P47988 759 aa4.84□□□□□ -1.63
SRO7YPR032W CHC1P22137 1653 aaKnown RBP4.84□□□□□ -1.64
SRO7YPR032W CDC25P04821 1589 aa4.83□□□□□ -1.64
SRO7YPR032W SIC1P38634 284 aa4.83□□□□□ -1.64
SRO7YPR032W CIN4P39110 191 aa4.83□□□□□ -1.64
SRO7YPR032W IML1P47170 1584 aa4.83□□□□□ -1.64
SRO7YPR032W RNA1P11745 407 aaKnown RBP4.83□□□□□ -1.64
SRO7YPR032W HAP5Q02516 242 aa4.83□□□□□ -1.64
SRO7YPR032W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
SRO7YPR032W NTE1Q04958 1679 aa4.82□□□□□ -1.64
SRO7YPR032W YRF1-4O13559 1382 aa4.82□□□□□ -1.64
SRO7YPR032W YML133CQ03099 1374 aa4.82□□□□□ -1.64
SRO7YPR032W YLL067CQ07888 1374 aa4.82□□□□□ -1.64
SRO7YPR032W YLL066CQ99208 1374 aa4.82□□□□□ -1.64
SRO7YPR032W RAD9P14737 1309 aa4.81□□□□□ -1.64
SRO7YPR032W NUP192P47054 1683 aa4.81□□□□□ -1.64
SRO7YPR032W MED8P38304 223 aa4.81□□□□□ -1.64
SRO7YPR032W ROM2P51862 1356 aaKnown RBP4.81□□□□□ -1.64
SRO7YPR032W NOP14Q99207 810 aaKnown RBP4.81□□□□□ -1.64
SRO7YPR032W MDS3P53094 1487 aa4.8□□□□□ -1.64
SRO7YPR032W SRP54P20424 541 aaKnown RBP4.8□□□□□ -1.64
SRO7YPR032W HSP82P02829 709 aaKnown RBP4.8□□□□□ -1.64
SRO7YPR032W SUI2P20459 304 aaKnown RBP4.8□□□□□ -1.64
SRO7YPR032W TCD1P38756 429 aa4.8□□□□□ -1.64
SRO7YPR032W NOP7P53261 605 aaKnown RBP4.8□□□□□ -1.64
SRO7YPR032W LTE1P07866 1435 aa4.79□□□□□ -1.64
SRO7YPR032W ECM1P39715 212 aa4.79□□□□□ -1.64
SRO7YPR032W YNL011CP53980 444 aa4.79□□□□□ -1.64
SRO7YPR032W BMS1Q08965 1183 aaKnown RBP4.79□□□□□ -1.64
SRO7YPR032W YOL087CQ99247 1116 aa4.79□□□□□ -1.64
SRO7YPR032W PDR11P40550 1411 aa4.79□□□□□ -1.64
SRO7YPR032W LCD1Q04377 747 aa4.78□□□□□ -1.64
SRO7YPR032W TPM2P40414 161 aa4.77□□□□□ -1.65
SRO7YPR032W KRE33P53914 1056 aaKnown RBP4.77□□□□□ -1.65
SRO7YPR032W SPT2P06843 333 aaPredicted RBP4.77□□□□□ -1.65
SRO7YPR032W VPS72Q03388 795 aa4.77□□□□□ -1.65
SRO7YPR032W VPS60Q03390 229 aa4.77□□□□□ -1.65
SRO7YPR032W RRP5Q05022 1729 aaKnown RBP4.77□□□□□ -1.65
SRO7YPR032W AUS1Q08409 1394 aa4.77□□□□□ -1.65
SRO7YPR032W LTV1P34078 463 aa4.77□□□□□ -1.65
SRO7YPR032W RKM3P38222 552 aa4.77□□□□□ -1.65
SRO7YPR032W HOS3Q02959 697 aaKnown RBP4.77□□□□□ -1.65
SRO7YPR032W YSP2Q06681 1438 aa4.76□□□□□ -1.65
SRO7YPR032W DUR1,2P32528 1835 aaKnown RBP4.76□□□□□ -1.65
SRO7YPR032W MSH4P40965 878 aaPredicted RBP4.76□□□□□ -1.65
SRO7YPR032W RAV1P47104 1357 aa4.76□□□□□ -1.65
SRO7YPR032W RAD2P07276 1031 aa4.75□□□□□ -1.65
SRO7YPR032W RRT14P40470 206 aa4.75□□□□□ -1.65
SRO7YPR032W YDL144CQ07589 356 aa4.75□□□□□ -1.65
SRO7YPR032W STU2P46675 888 aa4.75□□□□□ -1.65
SRO7YPR032W PRP3Q03338 469 aaPredicted RBP4.75□□□□□ -1.65
SRO7YPR032W MSH3P25336 1018 aa4.75□□□□□ -1.65
SRO7YPR032W MPE1P35728 441 aaKnown RBP4.75□□□□□ -1.65
SRO7YPR032W DSN1P40568 576 aa4.75□□□□□ -1.65
SRO7YPR032W RSC1P53236 928 aa4.75□□□□□ -1.65
SRO7YPR032W USO1P25386 1790 aa4.74□□□□□ -1.65
SRO7YPR032W RPA190P10964 1664 aaKnown RBP4.74□□□□□ -1.65
SRO7YPR032W SWI3P32591 825 aa4.74□□□□□ -1.65
SRO7YPR032W RTC1Q08281 1341 aa4.74□□□□□ -1.65
SRO7YPR032W MCM2P29469 868 aa4.74□□□□□ -1.65
SRO7YPR032W CLB5P30283 435 aa4.74□□□□□ -1.65
SRO7YPR032W ITC1P53125 1264 aa4.74□□□□□ -1.65
SRO7YPR032W TAN1P53072 289 aaPredicted RBP4.73□□□□□ -1.65
SRO7YPR032W MRS2Q01926 470 aa4.73□□□□□ -1.65
SRO7YPR032W RNT1Q02555 471 aa4.73□□□□□ -1.65
SRO7YPR032W SIR4P11978 1358 aa4.73□□□□□ -1.65
SRO7YPR032W MSH1P25846 959 aa4.73□□□□□ -1.65
SRO7YPR032W BDH2P39713 417 aa4.73□□□□□ -1.65
SRO7YPR032W PBY1P38254 753 aa4.72□□□□□ -1.65
SRO7YPR032W CEP3P40969 608 aa4.72□□□□□ -1.65
SRO7YPR032W CIR1P42940 261 aa4.72□□□□□ -1.65
SRO7YPR032W BUD27P43573 796 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
SRO7YPR032W YIL092WP40497 633 aa4.72□□□□□ -1.65
SRO7YPR032W ESC2Q06340 456 aa4.72□□□□□ -1.65
SRO7YPR032W VMR1P38735 1592 aa4.72□□□□□ -1.65
SRO7YPR032W SAP190P36123 1033 aa4.72□□□□□ -1.65
SRO7YPR032W POL32P47110 350 aa4.72□□□□□ -1.65
SRO7YPR032W NOP8Q08287 484 aaPredicted RBP4.72□□□□□ -1.65
SRO7YPR032W BUD3P25558 1636 aa4.71□□□□□ -1.66
SRO7YPR032W SRS2P12954 1174 aa4.71□□□□□ -1.66
SRO7YPR032W SML1Q04964 104 aa4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms