RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W SPA2P23201 1466 aaKnown RBP6.29□□□□□ -1.4
SRO7YPR032W SKI3P17883 1432 aaKnown RBP6.11□□□□□ -1.43
SRO7YPR032W BFR2Q06631 534 aaKnown RBP6.1□□□□□ -1.43
SRO7YPR032W SSN2P38931 1420 aa6.05□□□□□ -1.44
SRO7YPR032W SGS1P35187 1447 aa6.01□□□□□ -1.45
SRO7YPR032W NOP2P40991 618 aaKnown RBP5.93□□□□□ -1.46
SRO7YPR032W INO80P53115 1489 aa5.86□□□□□ -1.47
SRO7YPR032W CHD1P32657 1468 aa5.82□□□□□ -1.48
SRO7YPR032W NSR1P27476 414 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
SRO7YPR032W TCB3Q03640 1545 aaKnown RBP5.71□□□□□ -1.5
SRO7YPR032W MMS22Q06164 1454 aa5.7□□□□□ -1.5
SRO7YPR032W RQC2Q12532 1038 aaKnown RBP5.68□□□□□ -1.5
SRO7YPR032W UFD4P33202 1483 aa5.68□□□□□ -1.5
SRO7YPR032W DRS1P32892 752 aaKnown RBP5.66□□□□□ -1.5
SRO7YPR032W XRN1P22147 1528 aaKnown RBP5.64□□□□□ -1.51
SRO7YPR032W EBP2P36049 427 aaKnown RBP5.64□□□□□ -1.51
SRO7YPR032W MON2P48563 1636 aaPredicted RBP5.61□□□□□ -1.51
SRO7YPR032W CAB3P36076 571 aa5.58□□□□□ -1.52
SRO7YPR032W NUP170P38181 1502 aa5.56□□□□□ -1.52
SRO7YPR032W SPP41P38904 1435 aa5.53□□□□□ -1.52
SRO7YPR032W STH1P32597 1359 aa5.52□□□□□ -1.53
SRO7YPR032W TY1B-DR4Q07793 1604 aa5.52□□□□□ -1.53
SRO7YPR032W ENP1P38333 483 aaKnown RBP5.5□□□□□ -1.53
SRO7YPR032W TRM732Q03496 1420 aa5.49□□□□□ -1.53
SRO7YPR032W ECM5Q03214 1411 aa5.48□□□□□ -1.53
SRO7YPR032W SIN3P22579 1536 aa5.48□□□□□ -1.53
SRO7YPR032W PEP1P32319 1579 aa5.47□□□□□ -1.53
SRO7YPR032W THO2P53552 1597 aaKnown RBP5.47□□□□□ -1.53
SRO7YPR032W YPR148CQ06523 435 aa5.45□□□□□ -1.54
SRO7YPR032W MLP2P40457 1679 aa5.44□□□□□ -1.54
SRO7YPR032W HSL1P34244 1518 aa5.44□□□□□ -1.54
SRO7YPR032W STU1P38198 1513 aa5.44□□□□□ -1.54
SRO7YPR032W URN1Q06525 465 aaKnown RBP5.44□□□□□ -1.54
SRO7YPR032W SSK2P53599 1579 aa5.43□□□□□ -1.54
SRO7YPR032W SIS2P36024 562 aa5.43□□□□□ -1.54
SRO7YPR032W IKI3Q06706 1349 aaKnown RBP5.42□□□□□ -1.54
SRO7YPR032W MYO2P19524 1574 aaKnown RBP5.4□□□□□ -1.54
SRO7YPR032W TFA1P36100 482 aa5.39□□□□□ -1.55
SRO7YPR032W PDR10P51533 1564 aa5.38□□□□□ -1.55
SRO7YPR032W HIR3P47171 1648 aa5.37□□□□□ -1.55
SRO7YPR032W REV3P14284 1504 aa5.37□□□□□ -1.55
SRO7YPR032W POL1P13382 1468 aa5.36□□□□□ -1.55
SRO7YPR032W SPT6P23615 1451 aaKnown RBP5.36□□□□□ -1.55
SRO7YPR032W SEC3P33332 1336 aaKnown RBP5.36□□□□□ -1.55
SRO7YPR032W ESP1Q03018 1630 aa5.35□□□□□ -1.55
SRO7YPR032W PRS1P32895 427 aaKnown RBP5.33□□□□□ -1.56
SRO7YPR032W RSE1Q04693 1361 aaKnown RBP5.33□□□□□ -1.56
SRO7YPR032W YLR419WQ06698 1435 aaKnown RBP5.32□□□□□ -1.56
SRO7YPR032W IRC20Q06554 1556 aa5.32□□□□□ -1.56
SRO7YPR032W TCB2P48231 1178 aa5.32□□□□□ -1.56
SRO7YPR032W SRB8P25648 1427 aa5.31□□□□□ -1.56
SRO7YPR032W YTA7P40340 1379 aa5.31□□□□□ -1.56
SRO7YPR032W SCC2Q04002 1493 aa5.31□□□□□ -1.56
SRO7YPR032W BPT1P14772 1559 aa5.31□□□□□ -1.56
SRO7YPR032W MYO4P32492 1471 aa5.3□□□□□ -1.56
SRO7YPR032W SPT7P35177 1332 aa5.3□□□□□ -1.56
SRO7YPR032W SSM4P40318 1319 aa5.3□□□□□ -1.56
SRO7YPR032W POL5P39985 1022 aaKnown RBP5.29□□□□□ -1.56
SRO7YPR032W BUD4P47136 1447 aa5.28□□□□□ -1.56
SRO7YPR032W IME2P32581 645 aa5.27□□□□□ -1.57
SRO7YPR032W TAF7Q05021 590 aa5.26□□□□□ -1.57
SRO7YPR032W ESC1Q03661 1658 aaKnown RBP5.26□□□□□ -1.57
SRO7YPR032W TOP2P06786 1428 aaKnown RBP5.25□□□□□ -1.57
SRO7YPR032W YCF1P39109 1515 aaKnown RBP5.24□□□□□ -1.57
SRO7YPR032W CLC1P17891 233 aa5.23□□□□□ -1.57
SRO7YPR032W DNA2P38859 1522 aa5.23□□□□□ -1.57
SRO7YPR032W YOR1P53049 1477 aa5.23□□□□□ -1.57
SRO7YPR032W TAF2P23255 1407 aa5.22□□□□□ -1.57
SRO7YPR032W OPY1P38271 328 aa5.22□□□□□ -1.57
SRO7YPR032W YPK9Q12697 1472 aa5.22□□□□□ -1.57
SRO7YPR032W SNQ2P32568 1501 aaKnown RBP5.21□□□□□ -1.58
SRO7YPR032W KOG1P38873 1557 aa5.21□□□□□ -1.58
SRO7YPR032W SWR1Q05471 1514 aa5.2□□□□□ -1.58
SRO7YPR032W SMC4Q12267 1418 aa5.2□□□□□ -1.58
SRO7YPR032W PDR5P33302 1511 aaKnown RBP5.2□□□□□ -1.58
SRO7YPR032W GCN2P15442 1659 aa5.19□□□□□ -1.58
SRO7YPR032W CFT1Q06632 1357 aaKnown RBP5.19□□□□□ -1.58
SRO7YPR032W RKR1Q04781 1562 aa5.18□□□□□ -1.58
SRO7YPR032W ULS1Q08562 1619 aa5.18□□□□□ -1.58
SRO7YPR032W TY3B-GQ99315 1547 aa5.17□□□□□ -1.58
SRO7YPR032W PAN1P32521 1480 aa5.17□□□□□ -1.58
SRO7YPR032W NUP159P40477 1460 aa5.16□□□□□ -1.58
SRO7YPR032W RLF2Q12495 606 aa5.14□□□□□ -1.59
SRO7YPR032W PDR15Q04182 1529 aaKnown RBP5.14□□□□□ -1.59
SRO7YPR032W TY1B-DR3Q99231 1755 aa5.14□□□□□ -1.59
SRO7YPR032W TSC11P40061 1430 aa5.14□□□□□ -1.59
SRO7YPR032W MMS1Q06211 1407 aa5.14□□□□□ -1.59
SRO7YPR032W YIR014WP40570 242 aa5.13□□□□□ -1.59
SRO7YPR032W MNN4P36044 1178 aa5.12□□□□□ -1.59
SRO7YPR032W YBT1P32386 1661 aa5.12□□□□□ -1.59
SRO7YPR032W ATG2P53855 1592 aa5.12□□□□□ -1.59
SRO7YPR032W SNF7P39929 240 aaKnown RBP5.12□□□□□ -1.59
SRO7YPR032W GEA1P47102 1408 aaPredicted RBP5.11□□□□□ -1.59
SRO7YPR032W QCR6P00127 147 aa5.11□□□□□ -1.59
SRO7YPR032W AVT3P36062 692 aa5.11□□□□□ -1.59
SRO7YPR032W YFR016CP43597 1233 aaKnown RBP5.11□□□□□ -1.59
SRO7YPR032W NOP53Q12080 455 aaKnown RBP5.1□□□□□ -1.59
SRO7YPR032W RPS0BP46654 252 aaKnown RBP5.09□□□□□ -1.59
SRO7YPR032W DNF1P32660 1571 aa5.09□□□□□ -1.59
SRO7YPR032W MHP1P43638 1398 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms