RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK2YNR031C MLP1Q02455 1875 aaKnown RBP2.46□□□□□ -2.02
SSK2YNR031C YAP3P38749 330 aa2.46□□□□□ -2.02
SSK2YNR031C THI12P42883 340 aa2.45□□□□□ -2.02
SSK2YNR031C THI5P43534 340 aa2.45□□□□□ -2.02
SSK2YNR031C THI11P47183 340 aa2.45□□□□□ -2.02
SSK2YNR031C THI13Q07748 340 aa2.45□□□□□ -2.02
SSK2YNR031C HKR1P41809 1802 aa2.44□□□□□ -2.02
SSK2YNR031C RPG1P38249 964 aaKnown RBP2.44□□□□□ -2.02
SSK2YNR031C PUS5Q06244 254 aa2.43□□□□□ -2.02
SSK2YNR031C TSR3Q12094 313 aaKnown RBP2.43□□□□□ -2.02
SSK2YNR031C IKI3Q06706 1349 aaKnown RBP2.43□□□□□ -2.02
SSK2YNR031C YBL086CP38177 466 aa2.42□□□□□ -2.02
SSK2YNR031C MET10P39692 1035 aa2.42□□□□□ -2.02
SSK2YNR031C URN1Q06525 465 aaKnown RBP2.42□□□□□ -2.02
SSK2YNR031C APP1P53933 587 aa2.41□□□□□ -2.02
SSK2YNR031C SSA4P22202 642 aaKnown RBP2.4□□□□□ -2.02
SSK2YNR031C POM152P39685 1337 aa2.4□□□□□ -2.03
SSK2YNR031C DUR1,2P32528 1835 aaKnown RBP2.4□□□□□ -2.03
SSK2YNR031C ALD2P47771 506 aa2.39□□□□□ -2.03
SSK2YNR031C NUP157P40064 1391 aaKnown RBP2.37□□□□□ -2.03
SSK2YNR031C RAV1P47104 1357 aa2.37□□□□□ -2.03
SSK2YNR031C PDR11P40550 1411 aa2.37□□□□□ -2.03
SSK2YNR031C BFR2Q06631 534 aaKnown RBP2.36□□□□□ -2.03
SSK2YNR031C ISW2Q08773 1120 aa2.36□□□□□ -2.03
SSK2YNR031C PTP3P40048 928 aa2.36□□□□□ -2.03
SSK2YNR031C CTH1P47976 325 aa2.36□□□□□ -2.03
SSK2YNR031C SSA2P10592 639 aaKnown RBP2.36□□□□□ -2.03
SSK2YNR031C YVH1Q02256 364 aaKnown RBP2.36□□□□□ -2.03
SSK2YNR031C IMH1Q06704 911 aaKnown RBP2.35□□□□□ -2.03
SSK2YNR031C YPR117WQ06116 2489 aa2.35□□□□□ -2.03
SSK2YNR031C MAL31P38156 614 aa2.35□□□□□ -2.03
SSK2YNR031C SRF1Q12516 437 aa2.33□□□□□ -2.04
SSK2YNR031C TFA1P36100 482 aa2.33□□□□□ -2.04
SSK2YNR031C DIP2Q12220 943 aaPredicted RBP2.33□□□□□ -2.04
SSK2YNR031C SCT1P32784 759 aa2.32□□□□□ -2.04
SSK2YNR031C FAS2P19097 1887 aaKnown RBP2.32□□□□□ -2.04
SSK2YNR031C SIS1P25294 352 aaKnown RBP2.32□□□□□ -2.04
SSK2YNR031C EAR1Q03212 550 aa2.31□□□□□ -2.04
SSK2YNR031C PIB1Q06651 286 aa2.31□□□□□ -2.04
SSK2YNR031C REB1P21538 810 aa2.31□□□□□ -2.04
SSK2YNR031C PMD1P32634 1753 aa2.3□□□□□ -2.04
SSK2YNR031C ETP1P38748 585 aaKnown RBP2.3□□□□□ -2.04
SSK2YNR031C SPT7P35177 1332 aa2.3□□□□□ -2.04
SSK2YNR031C RSF2P46974 1380 aa2.3□□□□□ -2.04
SSK2YNR031C CUP1-1P0CX80 61 aa2.3□□□□□ -2.04
SSK2YNR031C CUP1-2P0CX81 61 aa2.3□□□□□ -2.04
SSK2YNR031C FLO1P32768 1537 aa2.29□□□□□ -2.04
SSK2YNR031C ENT1Q12518 454 aa2.29□□□□□ -2.04
SSK2YNR031C NUM1Q00402 2748 aa2.29□□□□□ -2.04
SSK2YNR031C YMR084WA2P2R3 262 aa2.29□□□□□ -2.04
SSK2YNR031C LEU3P08638 886 aa2.28□□□□□ -2.04
SSK2YNR031C TOR1P35169 2470 aa2.27□□□□□ -2.05
SSK2YNR031C YJL181WP46987 611 aa2.27□□□□□ -2.05
SSK2YNR031C TAF7Q05021 590 aa2.27□□□□□ -2.05
SSK2YNR031C TFC8Q12308 588 aa2.27□□□□□ -2.05
SSK2YNR031C RTC1Q08281 1341 aa2.26□□□□□ -2.05
SSK2YNR031C RTT106P40161 455 aa2.26□□□□□ -2.05
SSK2YNR031C TIF6Q12522 245 aaKnown RBP2.25□□□□□ -2.05
SSK2YNR031C LYS2P07702 1392 aa2.25□□□□□ -2.05
SSK2YNR031C PSK1P31374 1356 aa2.25□□□□□ -2.05
SSK2YNR031C AVT3P36062 692 aa2.25□□□□□ -2.05
SSK2YNR031C NCS6P53088 359 aa2.25□□□□□ -2.05
SSK2YNR031C YNR014WP53719 212 aa2.25□□□□□ -2.05
SSK2YNR031C FRK1Q03002 865 aaPredicted RBP2.24□□□□□ -2.05
SSK2YNR031C ADE6P38972 1358 aaKnown RBP2.24□□□□□ -2.05
SSK2YNR031C CDC27P38042 758 aa2.24□□□□□ -2.05
SSK2YNR031C DLD1P32891 587 aa2.23□□□□□ -2.05
SSK2YNR031C RPN11P43588 306 aaKnown RBP2.23□□□□□ -2.05
SSK2YNR031C SAP155P43612 1002 aa2.23□□□□□ -2.05
SSK2YNR031C RPS9BP05755 195 aaKnown RBP2.23□□□□□ -2.05
SSK2YNR031C ALD3P54114 506 aa2.23□□□□□ -2.05
SSK2YNR031C PRP40P33203 583 aaKnown RBP2.22□□□□□ -2.05
SSK2YNR031C MRPL32P25348 183 aa2.22□□□□□ -2.05
SSK2YNR031C FPK1P53739 893 aa2.21□□□□□ -2.06
SSK2YNR031C SQS1P53866 767 aaKnown RBP2.21□□□□□ -2.06
SSK2YNR031C PRP43P53131 767 aaKnown RBP2.21□□□□□ -2.06
SSK2YNR031C SIR4P11978 1358 aa2.21□□□□□ -2.06
SSK2YNR031C CTT1P06115 562 aa2.2□□□□□ -2.06
SSK2YNR031C CLA4P48562 842 aa2.2□□□□□ -2.06
SSK2YNR031C FBP1P09201 348 aa2.2□□□□□ -2.06
SSK2YNR031C LYS4P49367 693 aaPredicted RBP2.2□□□□□ -2.06
SSK2YNR031C DCD1P06773 312 aa2.2□□□□□ -2.06
SSK2YNR031C RPL17AP05740 184 aaKnown RBP2.2□□□□□ -2.06
SSK2YNR031C YEF3P16521 1044 aaKnown RBP2.2□□□□□ -2.06
SSK2YNR031C YER156CP40093 338 aaKnown RBP2.2□□□□□ -2.06
SSK2YNR031C RPL17BP46990 184 aaKnown RBP2.2□□□□□ -2.06
SSK2YNR031C FKS1P38631 1876 aaKnown RBP2.19□□□□□ -2.06
SSK2YNR031C PAM1P37304 830 aaKnown RBP2.18□□□□□ -2.06
SSK2YNR031C LAM6Q08001 693 aa2.18□□□□□ -2.06
SSK2YNR031C SSM4P40318 1319 aa2.18□□□□□ -2.06
SSK2YNR031C BDF1P35817 686 aa2.18□□□□□ -2.06
SSK2YNR031C ROM2P51862 1356 aaKnown RBP2.18□□□□□ -2.06
SSK2YNR031C NSR1P27476 414 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
SSK2YNR031C YFR016CP43597 1233 aaKnown RBP2.17□□□□□ -2.06
SSK2YNR031C NPR2P39923 615 aa2.17□□□□□ -2.06
SSK2YNR031C PSH1Q12161 406 aa2.17□□□□□ -2.06
SSK2YNR031C YLR278CQ05854 1341 aa2.17□□□□□ -2.06
SSK2YNR031C SPT21P35209 758 aa2.16□□□□□ -2.06
SSK2YNR031C YGL015CP33199 130 aa2.16□□□□□ -2.06
SSK2YNR031C ZDS2P54786 942 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms