RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	RSE1	Q04693	1361 aa	Known RBP	3.93	□□□□□ -1.78
SSK2	YNR031C	INO80	P53115	1489 aa		3.9	□□□□□ -1.78
SSK2	YNR031C	MON2	P48563	1636 aa	Predicted RBP	3.9	□□□□□ -1.79
SSK2	YNR031C	TY1B-DR4	Q07793	1604 aa		3.9	□□□□□ -1.79
SSK2	YNR031C	MIF2	P35201	549 aa		3.75	□□□□□ -1.81
SSK2	YNR031C	SIN3	P22579	1536 aa		3.67	□□□□□ -1.82
SSK2	YNR031C	SPA2	P23201	1466 aa	Known RBP	3.66	□□□□□ -1.82
SSK2	YNR031C	DNA2	P38859	1522 aa		3.66	□□□□□ -1.82
SSK2	YNR031C	SSK2	P53599	1579 aa		3.66	□□□□□ -1.82
SSK2	YNR031C	MTC1	P47018	478 aa	Known RBP	3.65	□□□□□ -1.82
SSK2	YNR031C	KOG1	P38873	1557 aa		3.62	□□□□□ -1.83
SSK2	YNR031C	TCB3	Q03640	1545 aa	Known RBP	3.6	□□□□□ -1.83
SSK2	YNR031C	XRN1	P22147	1528 aa	Known RBP	3.58	□□□□□ -1.84
SSK2	YNR031C	YFR006W	P43590	535 aa		3.5	□□□□□ -1.85
SSK2	YNR031C	THO2	P53552	1597 aa	Known RBP	3.5	□□□□□ -1.85
SSK2	YNR031C	CHD1	P32657	1468 aa		3.47	□□□□□ -1.85
SSK2	YNR031C	SWR1	Q05471	1514 aa		3.42	□□□□□ -1.86
SSK2	YNR031C	PEP1	P32319	1579 aa		3.4	□□□□□ -1.86
SSK2	YNR031C	PDR10	P51533	1564 aa		3.39	□□□□□ -1.87
SSK2	YNR031C	MYO2	P19524	1574 aa	Known RBP	3.39	□□□□□ -1.87
SSK2	YNR031C	SPT6	P23615	1451 aa	Known RBP	3.39	□□□□□ -1.87
SSK2	YNR031C	TY1B-BR	Q12193	1756 aa		3.37	□□□□□ -1.87
SSK2	YNR031C	TY1B-GR3	Q12316	1755 aa		3.37	□□□□□ -1.87
SSK2	YNR031C	TY1B-OR	Q92393	1755 aa		3.37	□□□□□ -1.87
SSK2	YNR031C	TY1B-DR3	Q99231	1755 aa		3.37	□□□□□ -1.87
SSK2	YNR031C	ATG2	P53855	1592 aa		3.37	□□□□□ -1.87
SSK2	YNR031C	HSL1	P34244	1518 aa		3.37	□□□□□ -1.87
SSK2	YNR031C	TY1B-H	O13535	1793 aa		3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-DR5	P0C2I2	1755 aa		3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-DR6	P0C2I3	1755 aa		3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-LR2	P0C2I5	1755 aa		3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-PR2	P0C2J0	1756 aa		3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-JR1	P47098	1755 aa		3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-ML2	Q03434	1755 aa	Known RBP	3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-ER1	Q03612	1755 aa		3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-ML1	Q04711	1755 aa	Known RBP	3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-GR2	Q12269	1755 aa		3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-OL	Q12273	1755 aa		3.36	□□□□□ -1.87
SSK2	YNR031C	TY1B-PL	Q12414	1755 aa	Known RBP	3.36	□□□□□ -1.87
SSK2	YNR031C	NUP170	P38181	1502 aa		3.36	□□□□□ -1.87
SSK2	YNR031C	TY2B-LR1	P0C2J3	1770 aa		3.35	□□□□□ -1.87
SSK2	YNR031C	TY2B-F	P0CX63	1770 aa		3.35	□□□□□ -1.87
SSK2	YNR031C	TY2B-GR2	P0CX64	1770 aa		3.35	□□□□□ -1.87
SSK2	YNR031C	TY2B-C	P25384	1770 aa		3.35	□□□□□ -1.87
SSK2	YNR031C	TY2B-DR2	Q03494	1770 aa		3.35	□□□□□ -1.87
SSK2	YNR031C	TY1B-DR1	Q03855	1755 aa		3.35	□□□□□ -1.87
SSK2	YNR031C	TY2B-DR3	Q07791	1770 aa	Known RBP	3.35	□□□□□ -1.87
SSK2	YNR031C	TY2B-OR1	Q12113	1770 aa		3.35	□□□□□ -1.87
SSK2	YNR031C	TY2B-DR1	Q12472	1770 aa		3.35	□□□□□ -1.87
SSK2	YNR031C	TY2B-OR2	Q12501	1770 aa		3.35	□□□□□ -1.87
SSK2	YNR031C	ESP1	Q03018	1630 aa		3.35	□□□□□ -1.87
SSK2	YNR031C	TY2B-B	Q12491	1770 aa		3.33	□□□□□ -1.88
SSK2	YNR031C	HAP1	P0CE41	1502 aa		3.32	□□□□□ -1.88
SSK2	YNR031C	HIR3	P47171	1648 aa		3.3	□□□□□ -1.88
SSK2	YNR031C	MLP2	P40457	1679 aa		3.26	□□□□□ -1.89
SSK2	YNR031C	PDR5	P33302	1511 aa	Known RBP	3.25	□□□□□ -1.89
SSK2	YNR031C	TY1B-JR2	P47100	1755 aa	Known RBP	3.24	□□□□□ -1.89
SSK2	YNR031C	TY1B-ER2	Q03619	1755 aa		3.24	□□□□□ -1.89
SSK2	YNR031C	TY1B-MR1	Q04214	1755 aa		3.24	□□□□□ -1.89
SSK2	YNR031C	TY1B-MR2	Q04670	1755 aa	Known RBP	3.24	□□□□□ -1.89
SSK2	YNR031C	TY1B-LR1	Q12088	1755 aa	Known RBP	3.24	□□□□□ -1.89
SSK2	YNR031C	TY1B-NL1	Q12112	1755 aa		3.24	□□□□□ -1.89
SSK2	YNR031C	TY1B-GR1	Q12141	1755 aa		3.24	□□□□□ -1.89
SSK2	YNR031C	TY1B-BL	Q12490	1755 aa		3.24	□□□□□ -1.89
SSK2	YNR031C	ECM5	Q03214	1411 aa		3.24	□□□□□ -1.89
SSK2	YNR031C	ABP1	P15891	592 aa	Known RBP	3.21	□□□□□ -1.9
SSK2	YNR031C	RPO21	P04050	1733 aa	Known RBP	3.21	□□□□□ -1.9
SSK2	YNR031C	IRC20	Q06554	1556 aa		3.2	□□□□□ -1.9
SSK2	YNR031C	ESC1	Q03661	1658 aa	Known RBP	3.2	□□□□□ -1.9
SSK2	YNR031C	YPK9	Q12697	1472 aa		3.2	□□□□□ -1.9
SSK2	YNR031C	REV3	P14284	1504 aa		3.19	□□□□□ -1.9
SSK2	YNR031C	SSN2	P38931	1420 aa		3.19	□□□□□ -1.9
SSK2	YNR031C	RPA190	P10964	1664 aa	Known RBP	3.19	□□□□□ -1.9
SSK2	YNR031C	SGS1	P35187	1447 aa		3.17	□□□□□ -1.9
SSK2	YNR031C	NTE1	Q04958	1679 aa		3.17	□□□□□ -1.9
SSK2	YNR031C	RPO31	P04051	1460 aa		3.14	□□□□□ -1.91
SSK2	YNR031C	SKI3	P17883	1432 aa	Known RBP	3.13	□□□□□ -1.91
SSK2	YNR031C	POL1	P13382	1468 aa		3.13	□□□□□ -1.91
SSK2	YNR031C	DNF1	P32660	1571 aa		3.12	□□□□□ -1.91
SSK2	YNR031C	MYO4	P32492	1471 aa		3.12	□□□□□ -1.91
SSK2	YNR031C	YCF1	P39109	1515 aa	Known RBP	3.12	□□□□□ -1.91
SSK2	YNR031C	YBT1	P32386	1661 aa		3.11	□□□□□ -1.91
SSK2	YNR031C	CDC25	P04821	1589 aa		3.11	□□□□□ -1.91
SSK2	YNR031C	SPO14	P36126	1683 aa		3.11	□□□□□ -1.91
SSK2	YNR031C	LTE1	P07866	1435 aa		3.11	□□□□□ -1.91
SSK2	YNR031C	ULS1	Q08562	1619 aa		3.1	□□□□□ -1.91
SSK2	YNR031C	FAP1	P53971	965 aa		3.1	□□□□□ -1.91
SSK2	YNR031C	BPT1	P14772	1559 aa		3.1	□□□□□ -1.91
SSK2	YNR031C	CHC1	P22137	1653 aa	Known RBP	3.09	□□□□□ -1.92
SSK2	YNR031C	MDS3	P53094	1487 aa		3.08	□□□□□ -1.92
SSK2	YNR031C	PDR12	Q02785	1511 aa		3.06	□□□□□ -1.92
SSK2	YNR031C	SCC2	Q04002	1493 aa		3.06	□□□□□ -1.92
SSK2	YNR031C	STU1	P38198	1513 aa		3.06	□□□□□ -1.92
SSK2	YNR031C	YOR1	P53049	1477 aa		3.05	□□□□□ -1.92
SSK2	YNR031C	YRF1-1	P0CX20	1796 aa		3.05	□□□□□ -1.92
SSK2	YNR031C	YRF1-5	P0CX21	1796 aa		3.05	□□□□□ -1.92
SSK2	YNR031C	YRF1-8	P0CX22	1796 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms