RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	DIT2	P21595	489 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	GLN1	P32288	370 aa	Known RBP	3.04	□□□□□ -1.92
TOP2	YNL088W	NSE3	Q05541	303 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	TY4A-H	Q6Q5P6	413 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	HSC82	P15108	705 aa	Known RBP	3.04	□□□□□ -1.92
TOP2	YNL088W	RPN12	P32496	274 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	SRP40	P32583	406 aa	Predicted RBP	3.04	□□□□□ -1.92
TOP2	YNL088W	GRX7	P38068	203 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	NMD3	P38861	518 aa	Known RBP	3.04	□□□□□ -1.92
TOP2	YNL088W	IES2	P40154	320 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	ATF2	P53296	535 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	ALG12	P53730	551 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	CEF1	Q03654	590 aa	Predicted RBP	3.04	□□□□□ -1.92
TOP2	YNL088W	MAK21	Q12176	1025 aa	Known RBP	3.04	□□□□□ -1.92
TOP2	YNL088W	MAL31	P38156	614 aa		3.03	□□□□□ -1.92
TOP2	YNL088W	RPL34B	P40525	121 aa	Known RBP	3.03	□□□□□ -1.92
TOP2	YNL088W	NOB1	Q08444	459 aa	Known RBP	3.03	□□□□□ -1.92
TOP2	YNL088W	BIO2	P32451	375 aa		3.03	□□□□□ -1.92
TOP2	YNL088W	POB3	Q04636	552 aa	Known RBP	3.03	□□□□□ -1.92
TOP2	YNL088W	PUS1	Q12211	544 aa	Known RBP	3.03	□□□□□ -1.92
TOP2	YNL088W	NFU1	P32860	256 aa		3.03	□□□□□ -1.92
TOP2	YNL088W	SNU66	Q12420	587 aa	Predicted RBP	3.03	□□□□□ -1.92
TOP2	YNL088W	SPT2	P06843	333 aa	Predicted RBP	3.02	□□□□□ -1.93
TOP2	YNL088W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
TOP2	YNL088W	GRX4	P32642	244 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	PKH1	Q03407	766 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	SVF1	Q05515	481 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	TRX2	P22803	104 aa	Known RBP	3.02	□□□□□ -1.93
TOP2	YNL088W	SEC6	P32844	805 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	SPT21	P35209	758 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	MDM1	Q01846	1127 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	GDE1	Q02979	1223 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	YDR341C	Q05506	607 aa	Known RBP	3.02	□□□□□ -1.93
TOP2	YNL088W	TY1B-A	O13527	1196 aa	Known RBP	3.02	□□□□□ -1.93
TOP2	YNL088W	YKL091C	P33324	310 aa	Known RBP	3.02	□□□□□ -1.93
TOP2	YNL088W	MUM2	P38236	366 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	JIP5	Q06214	492 aa	Predicted RBP	3.02	□□□□□ -1.93
TOP2	YNL088W	QCR6	P00127	147 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	ERG12	P07277	443 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	CIT2	P08679	460 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	CDC11	P32458	415 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	FUI1	P38196	639 aa		3.02	□□□□□ -1.93
TOP2	YNL088W	NOP53	Q12080	455 aa	Known RBP	3.02	□□□□□ -1.93
TOP2	YNL088W	SWI3	P32591	825 aa		3.01	□□□□□ -1.93
TOP2	YNL088W	TFC3	P34111	1160 aa		3.01	□□□□□ -1.93
TOP2	YNL088W	NUP42	P49686	430 aa	Known RBP	3.01	□□□□□ -1.93
TOP2	YNL088W	MET1	P36150	593 aa		3.01	□□□□□ -1.93
TOP2	YNL088W	ENP1	P38333	483 aa	Known RBP	3.01	□□□□□ -1.93
TOP2	YNL088W	PRP43	P53131	767 aa	Known RBP	3.01	□□□□□ -1.93
TOP2	YNL088W	THS1	P04801	734 aa	Known RBP	3.01	□□□□□ -1.93
TOP2	YNL088W	TIF1	P10081	395 aa	Known RBP	3.01	□□□□□ -1.93
TOP2	YNL088W	RAM2	P29703	316 aa		3.01	□□□□□ -1.93
TOP2	YNL088W	RTT106	P40161	455 aa		3.01	□□□□□ -1.93
TOP2	YNL088W	VPS24	P36095	224 aa	Known RBP	3	□□□□□ -1.93
TOP2	YNL088W	TTI1	P36097	1038 aa		3	□□□□□ -1.93
TOP2	YNL088W	PPX1	P38698	397 aa		3	□□□□□ -1.93
TOP2	YNL088W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
TOP2	YNL088W	IMH1	Q06704	911 aa	Known RBP	3	□□□□□ -1.93
TOP2	YNL088W	ISW2	Q08773	1120 aa		3	□□□□□ -1.93
TOP2	YNL088W	FAF1	P40546	346 aa	Predicted RBP	3	□□□□□ -1.93
TOP2	YNL088W	YPR204W	Q08995	1032 aa		3	□□□□□ -1.93
TOP2	YNL088W	YGR161W-C	Q3E744	92 aa		3	□□□□□ -1.93
TOP2	YNL088W	DPB3	P27344	201 aa		3	□□□□□ -1.93
TOP2	YNL088W	PPH3	P32345	308 aa		3	□□□□□ -1.93
TOP2	YNL088W	TAF1	P46677	1066 aa		3	□□□□□ -1.93
TOP2	YNL088W	POL32	P47110	350 aa		3	□□□□□ -1.93
TOP2	YNL088W	MAG2	Q06436	670 aa	Known RBP	3	□□□□□ -1.93
TOP2	YNL088W	CFT2	Q12102	859 aa	Predicted RBP	3	□□□□□ -1.93
TOP2	YNL088W	SPT7	P35177	1332 aa		3	□□□□□ -1.93
TOP2	YNL088W	RNA1	P11745	407 aa	Known RBP	2.99	□□□□□ -1.93
TOP2	YNL088W	VMA1	P17255	1071 aa	Known RBP	2.99	□□□□□ -1.93
TOP2	YNL088W	HOS2	P53096	452 aa	Predicted RBP	2.99	□□□□□ -1.93
TOP2	YNL088W	SVL3	Q03088	825 aa	Known RBP	2.99	□□□□□ -1.93
TOP2	YNL088W	GRX3	Q03835	250 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	APL5	Q08951	932 aa	Known RBP	2.99	□□□□□ -1.93
TOP2	YNL088W	HSP42	Q12329	375 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	PEA2	P40091	420 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	YML083C	Q04526	418 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	HEL2	Q05580	639 aa	Known RBP	2.99	□□□□□ -1.93
TOP2	YNL088W	BDP1	P46678	594 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	MTR4	P47047	1073 aa	Known RBP	2.99	□□□□□ -1.93
TOP2	YNL088W	CTF4	Q01454	927 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	MTC5	Q03897	1148 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	RRP15	Q06511	250 aa	Predicted RBP	2.99	□□□□□ -1.93
TOP2	YNL088W	ATE1	P16639	503 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	VAC8	P39968	578 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	DJP1	P40564	432 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	SEC27	P41811	889 aa	Known RBP	2.99	□□□□□ -1.93
TOP2	YNL088W	IOC3	P43596	787 aa		2.99	□□□□□ -1.93
TOP2	YNL088W	VMS1	Q04311	632 aa	Known RBP	2.98	□□□□□ -1.93
TOP2	YNL088W	CYB2	P00175	591 aa		2.98	□□□□□ -1.93
TOP2	YNL088W	PES4	P39684	611 aa		2.98	□□□□□ -1.93
TOP2	YNL088W	RCF1	Q03713	159 aa		2.98	□□□□□ -1.93
TOP2	YNL088W	CLF1	Q12309	687 aa	Predicted RBP	2.98	□□□□□ -1.93
TOP2	YNL088W	YBL113C	Q7M4S9	792 aa		2.98	□□□□□ -1.93
TOP2	YNL088W	VPS5	Q92331	675 aa		2.98	□□□□□ -1.93
TOP2	YNL088W	RTG2	P32608	588 aa	Known RBP	2.97	□□□□□ -1.93
TOP2	YNL088W	GLO3	P38682	493 aa	Known RBP	2.97	□□□□□ -1.93
TOP2	YNL088W	MNN1	P39106	762 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	YEN1	P40028	759 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms