RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	DRS1	P32892	752 aa	Known RBP	4.57	□□□□□ -1.68
TOP2	YNL088W	RQC2	Q12532	1038 aa	Known RBP	4.46	□□□□□ -1.7
TOP2	YNL088W	TFA1	P36100	482 aa		4.41	□□□□□ -1.7
TOP2	YNL088W	TAF7	Q05021	590 aa		4.41	□□□□□ -1.7
TOP2	YNL088W	BFR2	Q06631	534 aa	Known RBP	4.25	□□□□□ -1.73
TOP2	YNL088W	DMA1	P38823	416 aa		3.92	□□□□□ -1.78
TOP2	YNL088W	LEO1	P38439	464 aa		3.91	□□□□□ -1.78
TOP2	YNL088W	MTC1	P47018	478 aa	Known RBP	3.87	□□□□□ -1.79
TOP2	YNL088W	URN1	Q06525	465 aa	Known RBP	3.87	□□□□□ -1.79
TOP2	YNL088W	AVT3	P36062	692 aa		3.77	□□□□□ -1.81
TOP2	YNL088W	NAP1	P25293	417 aa	Known RBP	3.73	□□□□□ -1.81
TOP2	YNL088W	AIM44	Q99299	758 aa		3.73	□□□□□ -1.81
TOP2	YNL088W	IOC4	Q04213	475 aa		3.71	□□□□□ -1.82
TOP2	YNL088W	DIP2	Q12220	943 aa	Predicted RBP	3.66	□□□□□ -1.82
TOP2	YNL088W	YRB30	P53107	440 aa	Predicted RBP	3.63	□□□□□ -1.83
TOP2	YNL088W	IFH1	P39520	1085 aa		3.62	□□□□□ -1.83
TOP2	YNL088W	LEU3	P08638	886 aa		3.6	□□□□□ -1.83
TOP2	YNL088W	DMA2	P53924	522 aa		3.59	□□□□□ -1.83
TOP2	YNL088W	ORC1	P54784	914 aa	Predicted RBP	3.54	□□□□□ -1.84
TOP2	YNL088W	RLF2	Q12495	606 aa		3.53	□□□□□ -1.84
TOP2	YNL088W	ABP1	P15891	592 aa	Known RBP	3.52	□□□□□ -1.85
TOP2	YNL088W	TOP1	P04786	769 aa		3.52	□□□□□ -1.85
TOP2	YNL088W	SNU71	P53207	620 aa	Known RBP	3.51	□□□□□ -1.85
TOP2	YNL088W	SIS2	P36024	562 aa		3.49	□□□□□ -1.85
TOP2	YNL088W	PTP3	P40048	928 aa		3.48	□□□□□ -1.85
TOP2	YNL088W	YFR016C	P43597	1233 aa	Known RBP	3.46	□□□□□ -1.86
TOP2	YNL088W	RPN1	P38764	993 aa	Known RBP	3.46	□□□□□ -1.86
TOP2	YNL088W	SAS10	Q12136	610 aa	Predicted RBP	3.45	□□□□□ -1.86
TOP2	YNL088W	BRL1	P38770	471 aa		3.44	□□□□□ -1.86
TOP2	YNL088W	KRI1	P42846	591 aa	Known RBP	3.43	□□□□□ -1.86
TOP2	YNL088W	MNN4	P36044	1178 aa		3.42	□□□□□ -1.86
TOP2	YNL088W	YML020W	Q03722	664 aa		3.41	□□□□□ -1.86
TOP2	YNL088W	RPS0B	P46654	252 aa	Known RBP	3.39	□□□□□ -1.87
TOP2	YNL088W	MDG1	P53885	366 aa		3.39	□□□□□ -1.87
TOP2	YNL088W	NUG1	P40010	520 aa	Known RBP	3.37	□□□□□ -1.87
TOP2	YNL088W	NOP7	P53261	605 aa	Known RBP	3.37	□□□□□ -1.87
TOP2	YNL088W	SUB1	P54000	292 aa	Known RBP	3.36	□□□□□ -1.87
TOP2	YNL088W	CKB1	P43639	278 aa		3.36	□□□□□ -1.87
TOP2	YNL088W	SWE1	P32944	819 aa		3.36	□□□□□ -1.87
TOP2	YNL088W	VPS72	Q03388	795 aa		3.36	□□□□□ -1.87
TOP2	YNL088W	EBP2	P36049	427 aa	Known RBP	3.35	□□□□□ -1.87
TOP2	YNL088W	NOP8	Q08287	484 aa	Predicted RBP	3.35	□□□□□ -1.87
TOP2	YNL088W	GIN4	Q12263	1142 aa		3.35	□□□□□ -1.87
TOP2	YNL088W	ASF1	P32447	279 aa		3.33	□□□□□ -1.88
TOP2	YNL088W	SLX8	P40072	274 aa		3.33	□□□□□ -1.88
TOP2	YNL088W	RTS3	P53289	263 aa		3.33	□□□□□ -1.88
TOP2	YNL088W	BRN1	P38170	754 aa		3.32	□□□□□ -1.88
TOP2	YNL088W	ATG36	P46983	293 aa		3.31	□□□□□ -1.88
TOP2	YNL088W	LAM6	Q08001	693 aa		3.3	□□□□□ -1.88
TOP2	YNL088W	SSP1	P38871	571 aa		3.3	□□□□□ -1.88
TOP2	YNL088W	YJR008W	P47085	338 aa		3.29	□□□□□ -1.88
TOP2	YNL088W	MET10	P39692	1035 aa		3.28	□□□□□ -1.88
TOP2	YNL088W	TPO2	P53283	614 aa		3.28	□□□□□ -1.88
TOP2	YNL088W	OSW7	P43611	510 aa		3.28	□□□□□ -1.88
TOP2	YNL088W	CWC22	P53333	577 aa	Known RBP	3.28	□□□□□ -1.88
TOP2	YNL088W	FAR11	P53917	953 aa		3.28	□□□□□ -1.88
TOP2	YNL088W	SPB4	P25808	606 aa	Predicted RBP	3.27	□□□□□ -1.89
TOP2	YNL088W	HGH1	P48362	394 aa	Known RBP	3.27	□□□□□ -1.89
TOP2	YNL088W	FAP1	P53971	965 aa		3.27	□□□□□ -1.89
TOP2	YNL088W	HIF1	Q12373	385 aa		3.27	□□□□□ -1.89
TOP2	YNL088W	CAB3	P36076	571 aa		3.27	□□□□□ -1.89
TOP2	YNL088W	BUD21	Q08492	214 aa	Predicted RBP	3.27	□□□□□ -1.89
TOP2	YNL088W	RSE1	Q04693	1361 aa	Known RBP	3.27	□□□□□ -1.89
TOP2	YNL088W	SPC42	P36094	363 aa		3.27	□□□□□ -1.89
TOP2	YNL088W	YTA7	P40340	1379 aa		3.26	□□□□□ -1.89
TOP2	YNL088W	TOA1	P32773	286 aa		3.26	□□□□□ -1.89
TOP2	YNL088W	GEF1	P37020	779 aa		3.26	□□□□□ -1.89
TOP2	YNL088W	SSA1	P10591	642 aa	Known RBP	3.26	□□□□□ -1.89
TOP2	YNL088W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.26	□□□□□ -1.89	not detected
TOP2	YNL088W	SSF1	P38789	453 aa	Predicted RBP	3.25	□□□□□ -1.89
TOP2	YNL088W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.24	□□□□□ -1.89	not detected
TOP2	YNL088W	MRX12	P47084	519 aa		3.24	□□□□□ -1.89
TOP2	YNL088W	DOS2	P54858	310 aa		3.24	□□□□□ -1.89
TOP2	YNL088W	KIN1	P13185	1064 aa		3.23	□□□□□ -1.89
TOP2	YNL088W	PDR1	P12383	1068 aa		3.23	□□□□□ -1.89
TOP2	YNL088W	PAM1	P37304	830 aa	Known RBP	3.23	□□□□□ -1.89
TOP2	YNL088W	SLD2	P34252	453 aa		3.22	□□□□□ -1.89
TOP2	YNL088W	KIP3	P53086	805 aa	Known RBP	3.22	□□□□□ -1.89
TOP2	YNL088W	RLP24	Q07915	199 aa	Known RBP	3.22	□□□□□ -1.89
TOP2	YNL088W	ZDS1	P50111	915 aa	Known RBP	3.22	□□□□□ -1.89
TOP2	YNL088W	MAM3	Q12296	706 aa		3.21	□□□□□ -1.9
TOP2	YNL088W	AIM21	P40563	679 aa		3.2	□□□□□ -1.9
TOP2	YNL088W	SUB2	Q07478	446 aa	Known RBP	3.2	□□□□□ -1.9
TOP2	YNL088W	RRN6	P32786	894 aa		3.2	□□□□□ -1.9
TOP2	YNL088W	TY4A-J	P47023	414 aa		3.19	□□□□□ -1.9
TOP2	YNL088W	ISW1	P38144	1129 aa		3.19	□□□□□ -1.9
TOP2	YNL088W	MPP10	P47083	593 aa	Known RBP	3.19	□□□□□ -1.9
TOP2	YNL088W	RPT2	P40327	437 aa	Known RBP	3.19	□□□□□ -1.9
TOP2	YNL088W	YAF9	P53930	226 aa		3.19	□□□□□ -1.9
TOP2	YNL088W	UBX5	Q06682	500 aa		3.18	□□□□□ -1.9
TOP2	YNL088W	NHA1	Q99271	985 aa		3.18	□□□□□ -1.9
TOP2	YNL088W	SPT16	P32558	1035 aa	Known RBP	3.18	□□□□□ -1.9
TOP2	YNL088W	RPS0A	P32905	252 aa	Known RBP	3.18	□□□□□ -1.9
TOP2	YNL088W	OCA5	P38738	679 aa		3.18	□□□□□ -1.9
TOP2	YNL088W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
TOP2	YNL088W	TOM20	P35180	183 aa		3.17	□□□□□ -1.9
TOP2	YNL088W	ALD4	P46367	519 aa	Known RBP	3.17	□□□□□ -1.9
TOP2	YNL088W	BRE1	Q07457	700 aa	Known RBP	3.17	□□□□□ -1.9
TOP2	YNL088W	PSH1	Q12161	406 aa		3.17	□□□□□ -1.9
TOP2	YNL088W	GAL11	P19659	1081 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms