RNA–Protein interactions for RNA: YDR207C

UME6, Transcript of Rpd3L histone deacetylase complex subunit, yeastyeast

Gene UME6, Length 2,511 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME6YDR207C SWH1P35845 1188 aa12.57□□□□□ -0.4
UME6YDR207C LCD1Q04377 747 aa12.57□□□□□ -0.4
UME6YDR207C HIF1Q12373 385 aa12.57□□□□□ -0.4
UME6YDR207C VPS27P40343 622 aaKnown RBP12.56□□□□□ -0.4
UME6YDR207C CDC45Q08032 650 aa12.56□□□□□ -0.4
UME6YDR207C APL5Q08951 932 aaKnown RBP12.56□□□□□ -0.4
UME6YDR207C LSP1Q12230 341 aaKnown RBP12.56□□□□□ -0.4
UME6YDR207C ITC1P53125 1264 aa12.55□□□□□ -0.4
UME6YDR207C COG8Q04632 607 aa12.55□□□□□ -0.4
UME6YDR207C YGL140CP53120 1219 aa12.54□□□□□ -0.4
UME6YDR207C YOL087CQ99247 1116 aa12.54□□□□□ -0.4
UME6YDR207C MCM2P29469 868 aa12.54□□□□□ -0.4
UME6YDR207C PUP2P32379 260 aa12.54□□□□□ -0.4
UME6YDR207C YMR102CQ03177 834 aa12.53□□□□□ -0.4
UME6YDR207C SPT5P27692 1063 aaKnown RBP12.53□□□□□ -0.4
UME6YDR207C PDS5Q04264 1277 aa12.52□□□□□ -0.4
UME6YDR207C RPC82P32349 654 aa12.52□□□□□ -0.41
UME6YDR207C MGA2P40578 1113 aa12.52□□□□□ -0.41
UME6YDR207C YLL054CQ12244 843 aa12.52□□□□□ -0.41
UME6YDR207C MCM1P11746 286 aa12.51□□□□□ -0.41
UME6YDR207C PET111P08468 800 aa12.51□□□□□ -0.41
UME6YDR207C YMR1P47147 688 aaKnown RBP RIP-Chip data12.51□□□□□ -0.41not detected
UME6YDR207C ALD3P54114 506 aa12.51□□□□□ -0.41
UME6YDR207C MDM38Q08179 573 aa12.51□□□□□ -0.41
UME6YDR207C PUS1Q12211 544 aaKnown RBP12.51□□□□□ -0.41
UME6YDR207C TOA1P32773 286 aa12.5□□□□□ -0.41
UME6YDR207C YVC1Q12324 675 aa12.5□□□□□ -0.41
UME6YDR207C VPS30Q02948 557 aa12.5□□□□□ -0.41
UME6YDR207C RAD9P14737 1309 aa12.5□□□□□ -0.41
UME6YDR207C GCN2P15442 1659 aa12.5□□□□□ -0.41
UME6YDR207C SFI1Q12369 946 aa12.49□□□□□ -0.41
UME6YDR207C DSF2P38213 736 aa12.49□□□□□ -0.41
UME6YDR207C LEM3P42838 414 aa12.49□□□□□ -0.41
UME6YDR207C TSC11P40061 1430 aa12.48□□□□□ -0.41
UME6YDR207C GEA1P47102 1408 aaPredicted RBP12.47□□□□□ -0.41
UME6YDR207C PEA2P40091 420 aa12.47□□□□□ -0.41
UME6YDR207C SML1Q04964 104 aa12.46□□□□□ -0.41
UME6YDR207C RAD3P06839 778 aa12.46□□□□□ -0.42
UME6YDR207C MRS2Q01926 470 aa12.46□□□□□ -0.42
UME6YDR207C POL1P13382 1468 aa12.45□□□□□ -0.42
UME6YDR207C ZUO1P32527 433 aaKnown RBP12.45□□□□□ -0.42
UME6YDR207C SEC39Q12745 709 aa12.45□□□□□ -0.42
UME6YDR207C YCF1P39109 1515 aaKnown RBP12.45□□□□□ -0.42
UME6YDR207C SPT16P32558 1035 aaKnown RBP12.44□□□□□ -0.42
UME6YDR207C SEC9P40357 651 aa12.44□□□□□ -0.42
UME6YDR207C SLP1Q12232 587 aa12.44□□□□□ -0.42
UME6YDR207C RKM3P38222 552 aa12.43□□□□□ -0.42
UME6YDR207C GDT1P38301 280 aaPredicted RBP12.43□□□□□ -0.42
UME6YDR207C PXR1P53335 271 aaPredicted RBP12.43□□□□□ -0.42
UME6YDR207C RTT107P38850 1070 aa12.43□□□□□ -0.42
UME6YDR207C SUB1P54000 292 aaKnown RBP12.43□□□□□ -0.42
UME6YDR207C NUP157P40064 1391 aaKnown RBP12.42□□□□□ -0.42
UME6YDR207C VID30P53076 958 aa12.42□□□□□ -0.42
UME6YDR207C ORM2Q06144 216 aa12.42□□□□□ -0.42
UME6YDR207C NFI1Q12216 726 aa12.42□□□□□ -0.42
UME6YDR207C RPP0P05317 312 aaKnown RBP12.41□□□□□ -0.42
UME6YDR207C YNL050CP53952 270 aa12.4□□□□□ -0.42
UME6YDR207C PHO87P25360 923 aa12.4□□□□□ -0.42
UME6YDR207C NDL1Q06568 189 aa12.4□□□□□ -0.42
UME6YDR207C NUP159P40477 1460 aa12.39□□□□□ -0.43
UME6YDR207C KAR3P17119 729 aa12.39□□□□□ -0.43
UME6YDR207C ARP5P53946 755 aa12.39□□□□□ -0.43
UME6YDR207C YNL035CP53962 389 aaKnown RBP12.39□□□□□ -0.43
UME6YDR207C YMR124WP39523 943 aaKnown RBP12.39□□□□□ -0.43
UME6YDR207C AIM20P40451 204 aa12.38□□□□□ -0.43
UME6YDR207C STU2P46675 888 aa12.38□□□□□ -0.43
UME6YDR207C HAP5Q02516 242 aa12.38□□□□□ -0.43
UME6YDR207C PEX19Q07418 342 aa12.38□□□□□ -0.43
UME6YDR207C HSL1P34244 1518 aa12.37□□□□□ -0.43
UME6YDR207C PSO2P30620 661 aa12.37□□□□□ -0.43
UME6YDR207C MIC60P36112 540 aa12.37□□□□□ -0.43
UME6YDR207C VPS41P38959 992 aa12.37□□□□□ -0.43
UME6YDR207C SIT1P39980 628 aa12.37□□□□□ -0.43
UME6YDR207C APL6P46682 809 aa12.36□□□□□ -0.43
UME6YDR207C NOP56Q12460 504 aaKnown RBP RIP-Chip data12.36□□□□□ -0.43not detected
UME6YDR207C CEP3P40969 608 aa12.36□□□□□ -0.43
UME6YDR207C DNM1P54861 757 aa12.35□□□□□ -0.43
UME6YDR207C PDR5P33302 1511 aaKnown RBP12.35□□□□□ -0.43
UME6YDR207C DPH5P32469 300 aaPredicted RBP12.34□□□□□ -0.43
UME6YDR207C OLA1P38219 394 aaKnown RBP12.34□□□□□ -0.43
UME6YDR207C YOR389WQ08912 624 aa12.34□□□□□ -0.43
UME6YDR207C NDC80P40460 691 aa12.34□□□□□ -0.43
UME6YDR207C SSK2P53599 1579 aa12.33□□□□□ -0.44
UME6YDR207C CDC11P32458 415 aa12.33□□□□□ -0.44
UME6YDR207C MPP10P47083 593 aaKnown RBP12.33□□□□□ -0.44
UME6YDR207C MSH1P25846 959 aa12.32□□□□□ -0.44
UME6YDR207C CYC8P14922 966 aa12.31□□□□□ -0.44
UME6YDR207C NUP145P49687 1317 aa12.31□□□□□ -0.44
UME6YDR207C GIN4Q12263 1142 aa12.31□□□□□ -0.44
UME6YDR207C IAH1P41734 238 aa12.3□□□□□ -0.44
UME6YDR207C GGA1Q06336 557 aa12.3□□□□□ -0.44
UME6YDR207C TLG2Q08144 397 aa12.3□□□□□ -0.44
UME6YDR207C NUF2P33895 451 aa12.3□□□□□ -0.44
UME6YDR207C SUI2P20459 304 aaKnown RBP12.29□□□□□ -0.44
UME6YDR207C MAK11P20484 414 aaKnown RBP12.29□□□□□ -0.44
UME6YDR207C MFT1P33441 392 aaKnown RBP12.29□□□□□ -0.44
UME6YDR207C SNQ2P32568 1501 aaKnown RBP12.28□□□□□ -0.44
UME6YDR207C TY4B-PA0A0B7P3V8 1104 aa12.28□□□□□ -0.44
UME6YDR207C RIO2P40160 425 aaKnown RBP12.28□□□□□ -0.44
UME6YDR207C YKR023WP36119 530 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms