RNA–Protein interactions for RNA: YDR207C

UME6, Transcript of Rpd3L histone deacetylase complex subunit, yeastyeast

Gene UME6, Length 2,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME6YDR207C BFR2Q06631 534 aaKnown RBP16.95■□□□□ 0.3
UME6YDR207C RQC2Q12532 1038 aaKnown RBP16.74■□□□□ 0.27
UME6YDR207C NOP2P40991 618 aaKnown RBP15.86■□□□□ 0.13
UME6YDR207C EBP2P36049 427 aaKnown RBP15.41■□□□□ 0.06
UME6YDR207C CAB3P36076 571 aa15.38■□□□□ 0.05
UME6YDR207C NSR1P27476 414 aaKnown RBP RIP-Chip data15.3■□□□□ 0.04not detected
UME6YDR207C URN1Q06525 465 aaKnown RBP15.19■□□□□ 0.02
UME6YDR207C SIS2P36024 562 aa15.03■□□□□ -0
UME6YDR207C YPR148CQ06523 435 aa14.84□□□□□ -0.03
UME6YDR207C SKI3P17883 1432 aaKnown RBP14.72□□□□□ -0.05
UME6YDR207C SPA2P23201 1466 aaKnown RBP14.69□□□□□ -0.06
UME6YDR207C AVT3P36062 692 aa14.61□□□□□ -0.07
UME6YDR207C TAF7Q05021 590 aa14.5□□□□□ -0.09
UME6YDR207C YFR016CP43597 1233 aaKnown RBP14.47□□□□□ -0.09
UME6YDR207C SSN2P38931 1420 aa14.39□□□□□ -0.11
UME6YDR207C MON2P48563 1636 aaPredicted RBP14.33□□□□□ -0.11
UME6YDR207C SGS1P35187 1447 aa14.22□□□□□ -0.13
UME6YDR207C ENP1P38333 483 aaKnown RBP14.2□□□□□ -0.14
UME6YDR207C RPS0BP46654 252 aaKnown RBP14.19□□□□□ -0.14
UME6YDR207C TCB2P48231 1178 aa14.16□□□□□ -0.14
UME6YDR207C INO80P53115 1489 aa14.13□□□□□ -0.15
UME6YDR207C CWC22P53333 577 aaKnown RBP14.09□□□□□ -0.15
UME6YDR207C TCB3Q03640 1545 aaKnown RBP14.09□□□□□ -0.15
UME6YDR207C DRS1P32892 752 aaKnown RBP14.07□□□□□ -0.16
UME6YDR207C MNN4P36044 1178 aa14.03□□□□□ -0.16
UME6YDR207C RSE1Q04693 1361 aaKnown RBP14.01□□□□□ -0.17
UME6YDR207C LEO1P38439 464 aa14□□□□□ -0.17
UME6YDR207C AIM44Q99299 758 aa13.94□□□□□ -0.18
UME6YDR207C CLC1P17891 233 aa13.91□□□□□ -0.18
UME6YDR207C DIP2Q12220 943 aaPredicted RBP13.91□□□□□ -0.18
UME6YDR207C KRI1P42846 591 aaKnown RBP13.89□□□□□ -0.19
UME6YDR207C SEC3P33332 1336 aaKnown RBP13.87□□□□□ -0.19
UME6YDR207C STH1P32597 1359 aa13.84□□□□□ -0.19
UME6YDR207C IME2P32581 645 aa13.81□□□□□ -0.2
UME6YDR207C ENV11P53246 860 aa13.78□□□□□ -0.2
UME6YDR207C SPT7P35177 1332 aa13.77□□□□□ -0.21
UME6YDR207C TFA1P36100 482 aa13.75□□□□□ -0.21
UME6YDR207C PRS1P32895 427 aaKnown RBP13.73□□□□□ -0.21
UME6YDR207C FPR3P38911 411 aaKnown RBP13.72□□□□□ -0.21
UME6YDR207C QCR6P00127 147 aa13.7□□□□□ -0.22
UME6YDR207C MMS22Q06164 1454 aa13.7□□□□□ -0.22
UME6YDR207C YRB30P53107 440 aaPredicted RBP13.7□□□□□ -0.22
UME6YDR207C YGR130CP53278 816 aa13.69□□□□□ -0.22
UME6YDR207C NUG1P40010 520 aaKnown RBP13.67□□□□□ -0.22
UME6YDR207C DEF1P35732 738 aaKnown RBP13.67□□□□□ -0.22
UME6YDR207C SPT21P35209 758 aa13.66□□□□□ -0.22
UME6YDR207C POL5P39985 1022 aaKnown RBP13.66□□□□□ -0.22
UME6YDR207C NOP53Q12080 455 aaKnown RBP13.66□□□□□ -0.22
UME6YDR207C UFD4P33202 1483 aa13.65□□□□□ -0.22
UME6YDR207C RLF2Q12495 606 aa13.64□□□□□ -0.23
UME6YDR207C CHD1P32657 1468 aa13.57□□□□□ -0.24
UME6YDR207C OPY1P38271 328 aa13.57□□□□□ -0.24
UME6YDR207C EAF7P53911 425 aaKnown RBP13.54□□□□□ -0.24
UME6YDR207C RNA1P11745 407 aaKnown RBP13.52□□□□□ -0.24
UME6YDR207C XRN1P22147 1528 aaKnown RBP13.52□□□□□ -0.25
UME6YDR207C CFT1Q06632 1357 aaKnown RBP13.51□□□□□ -0.25
UME6YDR207C FPR4Q06205 392 aaPredicted RBP13.5□□□□□ -0.25
UME6YDR207C SPP41P38904 1435 aa13.5□□□□□ -0.25
UME6YDR207C SAS10Q12136 610 aaPredicted RBP13.48□□□□□ -0.25
UME6YDR207C ECM5Q03214 1411 aa13.48□□□□□ -0.25
UME6YDR207C PSH1Q12161 406 aa13.48□□□□□ -0.25
UME6YDR207C DNA2P38859 1522 aa13.45□□□□□ -0.26
UME6YDR207C RPC31P17890 251 aa13.41□□□□□ -0.26
UME6YDR207C SPT2P06843 333 aaPredicted RBP13.4□□□□□ -0.26
UME6YDR207C MTC1P47018 478 aaKnown RBP13.4□□□□□ -0.26
UME6YDR207C SNF7P39929 240 aaKnown RBP13.39□□□□□ -0.27
UME6YDR207C TRM732Q03496 1420 aa13.37□□□□□ -0.27
UME6YDR207C PAF1P38351 445 aa13.35□□□□□ -0.27
UME6YDR207C RIX1P38883 763 aaPredicted RBP13.34□□□□□ -0.27
UME6YDR207C LEU3P08638 886 aa13.33□□□□□ -0.28
UME6YDR207C KOG1P38873 1557 aa13.33□□□□□ -0.28
UME6YDR207C SPC110P32380 944 aa13.32□□□□□ -0.28
UME6YDR207C FUN12P39730 1002 aaKnown RBP13.32□□□□□ -0.28
UME6YDR207C IKI3Q06706 1349 aaKnown RBP13.32□□□□□ -0.28
UME6YDR207C NAP1P25293 417 aaKnown RBP13.31□□□□□ -0.28
UME6YDR207C YTA7P40340 1379 aa13.27□□□□□ -0.28
UME6YDR207C NMD2P38798 1089 aaKnown RBP13.24□□□□□ -0.29
UME6YDR207C RAD26P40352 1085 aa13.23□□□□□ -0.29
UME6YDR207C ROX1P25042 368 aa13.22□□□□□ -0.29
UME6YDR207C TOP2P06786 1428 aaKnown RBP13.22□□□□□ -0.29
UME6YDR207C CTR9P89105 1077 aa13.21□□□□□ -0.29
UME6YDR207C BUD4P47136 1447 aa13.21□□□□□ -0.3
UME6YDR207C SWE1P32944 819 aa13.19□□□□□ -0.3
UME6YDR207C NOP58Q12499 511 aaKnown RBP13.19□□□□□ -0.3
UME6YDR207C SRB8P25648 1427 aa13.18□□□□□ -0.3
UME6YDR207C HSP82P02829 709 aaKnown RBP13.18□□□□□ -0.3
UME6YDR207C RTT106P40161 455 aa13.18□□□□□ -0.3
UME6YDR207C PEP1P32319 1579 aa13.17□□□□□ -0.3
UME6YDR207C IOC4Q04213 475 aa13.16□□□□□ -0.3
UME6YDR207C SSM4P40318 1319 aa13.16□□□□□ -0.3
UME6YDR207C SLN1P39928 1220 aaPredicted RBP13.15□□□□□ -0.3
UME6YDR207C YNL011CP53980 444 aa13.15□□□□□ -0.3
UME6YDR207C RLP24Q07915 199 aaKnown RBP13.15□□□□□ -0.3
UME6YDR207C SWR1Q05471 1514 aa13.15□□□□□ -0.3
UME6YDR207C PDR10P51533 1564 aa13.13□□□□□ -0.31
UME6YDR207C PLP2Q12017 286 aa13.12□□□□□ -0.31
UME6YDR207C MMS1Q06211 1407 aa13.11□□□□□ -0.31
UME6YDR207C YPP1P46951 817 aa13.1□□□□□ -0.31
UME6YDR207C SMC3P47037 1230 aa13.1□□□□□ -0.31
UME6YDR207C VPS4P52917 437 aa13.08□□□□□ -0.32
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms