RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W PFA5Q03289 374 aa5.05□□□□□ -1.6
UBC6YER100W YMR130WQ04223 302 aa5.05□□□□□ -1.6
UBC6YER100W SIL1Q08199 421 aa5.05□□□□□ -1.6
UBC6YER100W AEP3Q12089 606 aa5.05□□□□□ -1.6
UBC6YER100W PSY3Q12318 242 aa5.05□□□□□ -1.6
UBC6YER100W RPN13O13563 156 aa5.04□□□□□ -1.6
UBC6YER100W PEP4P07267 405 aaKnown RBP5.04□□□□□ -1.6
UBC6YER100W GLK1P17709 500 aaKnown RBP5.04□□□□□ -1.6
UBC6YER100W CDC43P18898 376 aa5.04□□□□□ -1.6
UBC6YER100W AFG1P32317 509 aa5.04□□□□□ -1.6
UBC6YER100W ARA1P38115 344 aa5.04□□□□□ -1.6
UBC6YER100W WSS1P38838 269 aa5.04□□□□□ -1.6
UBC6YER100W CHS6P40955 746 aa5.04□□□□□ -1.6
UBC6YER100W STB4P50104 949 aa5.04□□□□□ -1.6
UBC6YER100W EAF7P53911 425 aaKnown RBP5.04□□□□□ -1.6
UBC6YER100W YMR206WQ03695 313 aa5.04□□□□□ -1.6
UBC6YER100W PIG1Q06216 648 aa5.04□□□□□ -1.6
UBC6YER100W ATG26Q06321 1198 aa5.04□□□□□ -1.6
UBC6YER100W ECM30Q06673 1274 aa5.04□□□□□ -1.6
UBC6YER100W ULA1Q12059 462 aa5.04□□□□□ -1.6
UBC6YER100W NCE102Q12207 173 aaRIP-Chip data5.04□□□□□ -1.6not detected
UBC6YER100W VAM3Q12241 283 aa5.04□□□□□ -1.6
UBC6YER100W SEC3P33332 1336 aaKnown RBP5.03□□□□□ -1.6
UBC6YER100W BI2P03873 423 aa5.03□□□□□ -1.6
UBC6YER100W GPA1P08539 472 aa5.03□□□□□ -1.6
UBC6YER100W DAP2P18962 818 aa5.03□□□□□ -1.6
UBC6YER100W MCM4P30665 933 aaKnown RBP5.03□□□□□ -1.6
UBC6YER100W SHP1P34223 423 aa5.03□□□□□ -1.6
UBC6YER100W OCT1P35999 772 aa5.03□□□□□ -1.6
UBC6YER100W UBA4P38820 440 aa5.03□□□□□ -1.6
UBC6YER100W YHR210CP38893 341 aa5.03□□□□□ -1.6
UBC6YER100W MBB1P39534 108 aa5.03□□□□□ -1.6
UBC6YER100W ERV46P39727 415 aa5.03□□□□□ -1.6
UBC6YER100W UBP5P39944 805 aa5.03□□□□□ -1.6
UBC6YER100W AVT1P47082 602 aa5.03□□□□□ -1.6
UBC6YER100W ORC5P50874 479 aa5.03□□□□□ -1.6
UBC6YER100W SUN4P53616 420 aa5.03□□□□□ -1.6
UBC6YER100W PDR16P53860 351 aaKnown RBP5.03□□□□□ -1.6
UBC6YER100W RHO5P53879 331 aaKnown RBP5.03□□□□□ -1.6
UBC6YER100W RSM23Q01163 450 aa5.03□□□□□ -1.6
UBC6YER100W ADA2Q02336 434 aa5.03□□□□□ -1.6
UBC6YER100W RPN9Q04062 393 aaKnown RBP5.03□□□□□ -1.6
UBC6YER100W PPM1Q04081 328 aa5.03□□□□□ -1.6
UBC6YER100W ADE13Q05911 482 aaKnown RBP5.03□□□□□ -1.6
UBC6YER100W YLR456WQ06199 204 aa5.03□□□□□ -1.6
UBC6YER100W RKM1Q08961 583 aaPredicted RBP5.03□□□□□ -1.6
UBC6YER100W SUT2Q12286 268 aa5.03□□□□□ -1.6
UBC6YER100W RDL1Q12305 139 aaKnown RBP5.03□□□□□ -1.6
UBC6YER100W COR1P07256 457 aa5.02□□□□□ -1.61
UBC6YER100W RIP1P08067 215 aa5.02□□□□□ -1.61
UBC6YER100W AQY1P0CD91 305 aa5.02□□□□□ -1.61
UBC6YER100W CNA1P23287 553 aa5.02□□□□□ -1.61
UBC6YER100W KRE2P27809 442 aa5.02□□□□□ -1.61
UBC6YER100W MSS51P32335 436 aa5.02□□□□□ -1.61
UBC6YER100W HIR2P32480 875 aa5.02□□□□□ -1.61
UBC6YER100W PXL1P36166 706 aa5.02□□□□□ -1.61
UBC6YER100W MRPL4P36517 319 aa5.02□□□□□ -1.61
UBC6YER100W APD1P38281 316 aa5.02□□□□□ -1.61
UBC6YER100W ANS1P38832 159 aa5.02□□□□□ -1.61
UBC6YER100W MLH1P38920 769 aa5.02□□□□□ -1.61
UBC6YER100W VHS2P40463 436 aa5.02□□□□□ -1.61
UBC6YER100W YTP1P53584 459 aa5.02□□□□□ -1.61
UBC6YER100W HEF3P53978 1044 aaKnown RBP5.02□□□□□ -1.61
UBC6YER100W ASI1P54074 624 aa5.02□□□□□ -1.61
UBC6YER100W VTI1Q04338 217 aa5.02□□□□□ -1.61
UBC6YER100W TMN2Q04562 672 aa5.02□□□□□ -1.61
UBC6YER100W DCS1Q06151 350 aa5.02□□□□□ -1.61
UBC6YER100W NDL1Q06568 189 aa5.02□□□□□ -1.61
UBC6YER100W YFH1Q07540 174 aa5.02□□□□□ -1.61
UBC6YER100W MLH2Q07980 695 aa5.02□□□□□ -1.61
UBC6YER100W YOR365CQ08844 703 aa5.02□□□□□ -1.61
UBC6YER100W HER1Q12276 1246 aa5.02□□□□□ -1.61
UBC6YER100W TFB5Q3E7C1 72 aaPredicted RBP5.02□□□□□ -1.61
UBC6YER100W NBL1Q3E7Y6 73 aa5.02□□□□□ -1.61
UBC6YER100W MTR10Q99189 972 aa5.02□□□□□ -1.61
UBC6YER100W RAV1P47104 1357 aa5.02□□□□□ -1.61
UBC6YER100W SRV2P17555 526 aaKnown RBP5.01□□□□□ -1.61
UBC6YER100W SGV1P23293 657 aaKnown RBP5.01□□□□□ -1.61
UBC6YER100W YMC1P32331 307 aa5.01□□□□□ -1.61
UBC6YER100W YKL023WP36103 277 aaKnown RBP5.01□□□□□ -1.61
UBC6YER100W MMS4P38257 691 aa5.01□□□□□ -1.61
UBC6YER100W ARN1P38731 627 aa5.01□□□□□ -1.61
UBC6YER100W PCL7P40186 285 aa5.01□□□□□ -1.61
UBC6YER100W YTA12P40341 825 aa5.01□□□□□ -1.61
UBC6YER100W CIN1P40987 1014 aa5.01□□□□□ -1.61
UBC6YER100W SHE4P51534 789 aa5.01□□□□□ -1.61
UBC6YER100W RMD9P53140 646 aaKnown RBP5.01□□□□□ -1.61
UBC6YER100W PRO2P54885 456 aaKnown RBP5.01□□□□□ -1.61
UBC6YER100W PDR8Q06149 701 aa5.01□□□□□ -1.61
UBC6YER100W MCH4Q08268 501 aa5.01□□□□□ -1.61
UBC6YER100W YOR389WQ08912 624 aa5.01□□□□□ -1.61
UBC6YER100W PUS9Q12069 462 aa5.01□□□□□ -1.61
UBC6YER100W MRH1Q12117 320 aaPredicted RBP5.01□□□□□ -1.61
UBC6YER100W YLR278CQ05854 1341 aa5□□□□□ -1.61
UBC6YER100W NUP1P20676 1076 aa5□□□□□ -1.61
UBC6YER100W YCR006CP25350 157 aa5□□□□□ -1.61
UBC6YER100W ZTA1P38230 334 aaKnown RBP5□□□□□ -1.61
UBC6YER100W YEL020CP39994 560 aa5□□□□□ -1.61
UBC6YER100W YMR147WP40218 223 aaKnown RBP5□□□□□ -1.61
UBC6YER100W YJL043WP47053 257 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms